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Items: 16

1.

Polar bear evolution is marked by rapid changes in gene copy number in response to dietary shift.

Rinker DC, Specian NK, Zhao S, Gibbons JG.

Proc Natl Acad Sci U S A. 2019 Jul 2;116(27):13446-13451. doi: 10.1073/pnas.1901093116. Epub 2019 Jun 17.

PMID:
31209046
2.

Maintaining Biological Cultures and Measuring Gene Expression in Aphis nerii: A Non-model System for Plant-insect Interactions.

Birnbaum SSL, Rinker DC, Abbot P.

J Vis Exp. 2018 Aug 31;(138). doi: 10.3791/58044.

PMID:
30222148
3.

Transcriptional profile and differential fitness in a specialist milkweed insect across host plants varying in toxicity.

Birnbaum SSL, Rinker DC, Gerardo NM, Abbot P.

Mol Ecol. 2017 Dec;26(23):6742-6761. doi: 10.1111/mec.14401. Epub 2017 Nov 25.

PMID:
29110382
4.

Comprehensive RNA profiling of villous trophoblast and decidua basalis in pregnancies complicated by preterm birth following intra-amniotic infection.

Ackerman WE 4th, Buhimschi IA, Eidem HR, Rinker DC, Rokas A, Rood K, Zhao G, Summerfield TL, Landon MB, Buhimschi CS.

Placenta. 2016 Aug;44:23-33. doi: 10.1016/j.placenta.2016.05.010. Epub 2016 May 30.

PMID:
27452435
5.

Comparing human and macaque placental transcriptomes to disentangle preterm birth pathology from gestational age effects.

Eidem HR, Rinker DC, Ackerman WE 4th, Buhimschi IA, Buhimschi CS, Dunn-Fletcher C, Kallapur SG, Pavličev M, Muglia LJ, Abbot P, Rokas A.

Placenta. 2016 May;41:74-82. doi: 10.1016/j.placenta.2016.03.006. Epub 2016 Mar 12.

PMID:
27208410
6.

Disease vectors in the era of next generation sequencing.

Rinker DC, Pitts RJ, Zwiebel LJ.

Genome Biol. 2016 May 6;17(1):95. doi: 10.1186/s13059-016-0966-4. Review.

7.

The origin and genetic differentiation of the socially parasitic aphid Tamalia inquilinus.

Miller DG 3rd, Lawson SP, Rinker DC, Estby H, Abbot P.

Mol Ecol. 2015 Nov;24(22):5751-66. doi: 10.1111/mec.13423. Epub 2015 Nov 11.

PMID:
26460808
8.

The genomics of microbial domestication in the fermented food environment.

Gibbons JG, Rinker DC.

Curr Opin Genet Dev. 2015 Dec;35:1-8. doi: 10.1016/j.gde.2015.07.003. Epub 2015 Aug 25. Review.

9.

Mosquito genomics. Highly evolvable malaria vectors: the genomes of 16 Anopheles mosquitoes.

Neafsey DE, Waterhouse RM, Abai MR, Aganezov SS, Alekseyev MA, Allen JE, Amon J, Arcà B, Arensburger P, Artemov G, Assour LA, Basseri H, Berlin A, Birren BW, Blandin SA, Brockman AI, Burkot TR, Burt A, Chan CS, Chauve C, Chiu JC, Christensen M, Costantini C, Davidson VL, Deligianni E, Dottorini T, Dritsou V, Gabriel SB, Guelbeogo WM, Hall AB, Han MV, Hlaing T, Hughes DS, Jenkins AM, Jiang X, Jungreis I, Kakani EG, Kamali M, Kemppainen P, Kennedy RC, Kirmitzoglou IK, Koekemoer LL, Laban N, Langridge N, Lawniczak MK, Lirakis M, Lobo NF, Lowy E, MacCallum RM, Mao C, Maslen G, Mbogo C, McCarthy J, Michel K, Mitchell SN, Moore W, Murphy KA, Naumenko AN, Nolan T, Novoa EM, O'Loughlin S, Oringanje C, Oshaghi MA, Pakpour N, Papathanos PA, Peery AN, Povelones M, Prakash A, Price DP, Rajaraman A, Reimer LJ, Rinker DC, Rokas A, Russell TL, Sagnon N, Sharakhova MV, Shea T, Simão FA, Simard F, Slotman MA, Somboon P, Stegniy V, Struchiner CJ, Thomas GW, Tojo M, Topalis P, Tubio JM, Unger MF, Vontas J, Walton C, Wilding CS, Willis JH, Wu YC, Yan G, Zdobnov EM, Zhou X, Catteruccia F, Christophides GK, Collins FH, Cornman RS, Crisanti A, Donnelly MJ, Emrich SJ, Fontaine MC, Gelbart W, Hahn MW, Hansen IA, Howell PI, Kafatos FC, Kellis M, Lawson D, Louis C, Luckhart S, Muskavitch MA, Ribeiro JM, Riehle MA, Sharakhov IV, Tu Z, Zwiebel LJ, Besansky NJ.

Science. 2015 Jan 2;347(6217):1258522. doi: 10.1126/science.1258522. Epub 2014 Nov 27.

10.

Divergent and conserved elements comprise the chemoreceptive repertoire of the nonblood-feeding mosquito Toxorhynchites amboinensis.

Zhou X, Rinker DC, Pitts RJ, Rokas A, Zwiebel LJ.

Genome Biol Evol. 2014 Oct 16;6(10):2883-96. doi: 10.1093/gbe/evu231.

11.

Antennal transcriptome profiles of anopheline mosquitoes reveal human host olfactory specialization in Anopheles gambiae.

Rinker DC, Zhou X, Pitts RJ; AGC Consortium, Rokas A, Zwiebel LJ.

BMC Genomics. 2013 Nov 1;14:749. doi: 10.1186/1471-2164-14-749.

12.

Blood meal-induced changes to antennal transcriptome profiles reveal shifts in odor sensitivities in Anopheles gambiae.

Rinker DC, Pitts RJ, Zhou X, Suh E, Rokas A, Zwiebel LJ.

Proc Natl Acad Sci U S A. 2013 May 14;110(20):8260-5. doi: 10.1073/pnas.1302562110. Epub 2013 Apr 29.

13.

The evolutionary imprint of domestication on genome variation and function of the filamentous fungus Aspergillus oryzae.

Gibbons JG, Salichos L, Slot JC, Rinker DC, McGary KL, King JG, Klich MA, Tabb DL, McDonald WH, Rokas A.

Curr Biol. 2012 Aug 7;22(15):1403-9. doi: 10.1016/j.cub.2012.05.033. Epub 2012 Jul 12.

14.

Heteromeric Anopheline odorant receptors exhibit distinct channel properties.

Pask GM, Jones PL, Rützler M, Rinker DC, Zwiebel LJ.

PLoS One. 2011;6(12):e28774. doi: 10.1371/journal.pone.0028774. Epub 2011 Dec 9.

15.

Transcriptome profiling of chemosensory appendages in the malaria vector Anopheles gambiae reveals tissue- and sex-specific signatures of odor coding.

Pitts RJ, Rinker DC, Jones PL, Rokas A, Zwiebel LJ.

BMC Genomics. 2011 May 27;12:271. doi: 10.1186/1471-2164-12-271.

16.

Functional agonism of insect odorant receptor ion channels.

Jones PL, Pask GM, Rinker DC, Zwiebel LJ.

Proc Natl Acad Sci U S A. 2011 May 24;108(21):8821-5. doi: 10.1073/pnas.1102425108. Epub 2011 May 9. Erratum in: Proc Natl Acad Sci U S A. 2011 Jul 5;108(27):11298.

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