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Effects of allochthonous dissolved organic matter input on microbial composition and nitrogen-cycling genes at two contrasting estuarine sites.

Happel EM, Markussen T, Teikari JE, Huchaiah V, Alneberg J, Andersson AF, Sivonen K, Middelboe M, Kisand V, Riemann L.

FEMS Microbiol Ecol. 2019 Sep 1;95(9). pii: fiz123. doi: 10.1093/femsec/fiz123.


Eukaryotic and cyanobacterial communities associated with marine snow particles in the oligotrophic Sargasso Sea.

Lundgreen RBC, Jaspers C, Traving SJ, Ayala DJ, Lombard F, Grossart HP, Nielsen TG, Munk P, Riemann L.

Sci Rep. 2019 Jun 20;9(1):8891. doi: 10.1038/s41598-019-45146-7.


Diazotrophs and N2-Fixation Associated With Particles in Coastal Estuarine Waters.

Pedersen JN, Bombar D, Paerl RW, Riemann L.

Front Microbiol. 2018 Nov 16;9:2759. doi: 10.3389/fmicb.2018.02759. eCollection 2018.


A quantitative model of nitrogen fixation in the presence of ammonium.

Inomura K, Bragg J, Riemann L, Follows MJ.

PLoS One. 2018 Nov 29;13(11):e0208282. doi: 10.1371/journal.pone.0208282. eCollection 2018.


AFISsys - An autonomous instrument for the preservation of brackish water samples for microbial metatranscriptome analysis.

Charvet S, Riemann L, Alneberg J, Andersson AF, von Borries J, Fischer U, Labrenz M.

Water Res. 2019 Feb 1;149:351-361. doi: 10.1016/j.watres.2018.11.017. Epub 2018 Nov 12.


Prevalent reliance of bacterioplankton on exogenous vitamin B1 and precursor availability.

Paerl RW, Sundh J, Tan D, Svenningsen SL, Hylander S, Pinhassi J, Andersson AF, Riemann L.

Proc Natl Acad Sci U S A. 2018 Oct 30;115(44):E10447-E10456. doi: 10.1073/pnas.1806425115. Epub 2018 Oct 15.


Coupling biogeochemical process rates and metagenomic blueprints of coastal bacterial assemblages in the context of environmental change.

Markussen T, Happel EM, Teikari JE, Huchaiah V, Alneberg J, Andersson AF, Sivonen K, Riemann L, Middelboe M, Kisand V.

Environ Microbiol. 2018 Aug;20(8):3083-3099. doi: 10.1111/1462-2920.14371. Epub 2018 Sep 19.


BARM and BalticMicrobeDB, a reference metagenome and interface to meta-omic data for the Baltic Sea.

Alneberg J, Sundh J, Bennke C, Beier S, Lundin D, Hugerth LW, Pinhassi J, Kisand V, Riemann L, Jürgens K, Labrenz M, Andersson AF.

Sci Data. 2018 Jul 31;5:180146. doi: 10.1038/sdata.2018.146.


Transplantation of Neural Precursor Cells Attenuates Chronic Immune Environment in Cervical Spinal Cord Injury.

Riemann L, Younsi A, Scherer M, Zheng G, Skutella T, Unterberg AW, Zweckberger K.

Front Neurol. 2018 Jun 8;9:428. doi: 10.3389/fneur.2018.00428. eCollection 2018.


Extensive nitrification and active ammonia oxidizers in two contrasting coastal systems of the Baltic Sea.

Happel E, Bartl I, Voss M, Riemann L.

Environ Microbiol. 2018 Aug;20(8):2913-2926. doi: 10.1111/1462-2920.14293. Epub 2018 Sep 10.


Author Correction: Carboxythiazole is a key microbial nutrient currency and critical component of thiamin biosynthesis.

Paerl RW, Bertrand EM, Rowland E, Schatt P, Mehiri M, Niehaus TD, Hanson AD, Riemann L, Bouget FY.

Sci Rep. 2018 Jun 6;8(1):8876. doi: 10.1038/s41598-018-27042-8.


Gelatinous plankton is important in the diet of European eel (Anguilla anguilla) larvae in the Sargasso Sea.

Ayala DJ, Munk P, Lundgreen RBC, Traving SJ, Jaspers C, Jørgensen TS, Hansen LH, Riemann L.

Sci Rep. 2018 Apr 18;8(1):6156. doi: 10.1038/s41598-018-24388-x.


Carboxythiazole is a key microbial nutrient currency and critical component of thiamin biosynthesis.

Paerl RW, Bertrand EM, Rowland E, Schatt P, Mehiri M, Niehaus TD, Hanson AD, Riemann L, Bouget FY.

Sci Rep. 2018 Apr 13;8(1):5940. doi: 10.1038/s41598-018-24321-2. Erratum in: Sci Rep. 2018 Jun 6;8(1):8876.


Ocean acidification and desalination: climate-driven change in a Baltic Sea summer microplanktonic community.

Wulff A, Karlberg M, Olofsson M, Torstensson A, Riemann L, Steinhoff FS, Mohlin M, Ekstrand N, Chierici M.

Mar Biol. 2018;165(4):63. doi: 10.1007/s00227-018-3321-3. Epub 2018 Mar 9.


Chasing after Non-cyanobacterial Nitrogen Fixation in Marine Pelagic Environments.

Moisander PH, Benavides M, Bonnet S, Berman-Frank I, White AE, Riemann L.

Front Microbiol. 2017 Sep 8;8:1736. doi: 10.3389/fmicb.2017.01736. eCollection 2017.


Mixing of water masses caused by a drifting iceberg affects bacterial activity, community composition and substrate utilization capability in the Southern Ocean.

Dinasquet J, Richert I, Logares R, Yager P, Bertilsson S, Riemann L.

Environ Microbiol. 2017 Jun;19(6):2453-2467. doi: 10.1111/1462-2920.13769. Epub 2017 May 26.


The Effect of Increased Loads of Dissolved Organic Matter on Estuarine Microbial Community Composition and Function.

Traving SJ, Rowe O, Jakobsen NM, Sørensen H, Dinasquet J, Stedmon CA, Andersson A, Riemann L.

Front Microbiol. 2017 Mar 9;8:351. doi: 10.3389/fmicb.2017.00351. eCollection 2017.


Marine Non-Cyanobacterial Diazotrophs: Moving beyond Molecular Detection.

Bombar D, Paerl RW, Riemann L.

Trends Microbiol. 2016 Nov;24(11):916-927. doi: 10.1016/j.tim.2016.07.002. Epub 2016 Jul 29. Review.


Coupling Bacterioplankton Populations and Environment to Community Function in Coastal Temperate Waters.

Traving SJ, Bentzon-Tilia M, Knudsen-Leerbeck H, Mantikci M, Hansen JL, Stedmon CA, Sørensen H, Markager S, Riemann L.

Front Microbiol. 2016 Sep 27;7:1533. eCollection 2016.


A model of extracellular enzymes in free-living microbes: which strategy pays off?

Traving SJ, Thygesen UH, Riemann L, Stedmon CA.

Appl Environ Microbiol. 2015 Nov;81(21):7385-93. doi: 10.1128/AEM.02070-15. Epub 2015 Aug 7.


Nitrogenase expression in estuarine bacterioplankton influenced by organic carbon and availability of oxygen.

Severin I, Bentzon-Tilia M, Moisander PH, Riemann L.

FEMS Microbiol Lett. 2015 Jul;362(14). pii: fnv105. doi: 10.1093/femsle/fnv105. Epub 2015 Jul 6.


Genomics and Ecophysiology of Heterotrophic Nitrogen-Fixing Bacteria Isolated from Estuarine Surface Water.

Bentzon-Tilia M, Severin I, Hansen LH, Riemann L.

MBio. 2015 Jul 7;6(4):e00929. doi: 10.1128/mBio.00929-15.


Microbial Diversity and Putative Diazotrophy in High- and Low-Microbial-Abundance Mediterranean Sponges.

Ribes M, Dziallas C, Coma R, Riemann L.

Appl Environ Microbiol. 2015 Sep 1;81(17):5683-93. doi: 10.1128/AEM.01320-15. Epub 2015 Jun 12.


Physicochemical control of bacterial and protist community composition and diversity in Antarctic sea ice.

Torstensson A, Dinasquet J, Chierici M, Fransson A, Riemann L, Wulff A.

Environ Microbiol. 2015 Oct;17(10):3869-81. doi: 10.1111/1462-2920.12865. Epub 2015 May 7.


Nitrogen-fixing bacteria associated with copepods in coastal waters of the North Atlantic Ocean.

Scavotto RE, Dziallas C, Bentzon-Tilia M, Riemann L, Moisander PH.

Environ Microbiol. 2015 Oct;17(10):3754-65. doi: 10.1111/1462-2920.12777. Epub 2015 Mar 2.


Draft Genome Sequence of Hoeflea sp. Strain BAL378, a Potential Producer of Bioactive Compounds.

Bentzon-Tilia M, Riemann L, Gram L.

Genome Announc. 2014 Nov 20;2(6). pii: e01213-14. doi: 10.1128/genomeA.01213-14.


Significant N₂ fixation by heterotrophs, photoheterotrophs and heterocystous cyanobacteria in two temperate estuaries.

Bentzon-Tilia M, Traving SJ, Mantikci M, Knudsen-Leerbeck H, Hansen JL, Markager S, Riemann L.

ISME J. 2015 Feb;9(2):273-85. doi: 10.1038/ismej.2014.119. Epub 2014 Jul 15.


Can tics be performed convincingly by an actor?

Müller-Vahl KR, Riemann L, Krämer H, Münchau A.

Behav Neurol. 2014;2014:893859. doi: 10.1155/2014/893859. Epub 2014 May 7.


Tourette patients' misbelief of a tic rebound is due to overall difficulties in reliable tic rating.

Müller-Vahl KR, Riemann L, Bokemeyer S.

J Psychosom Res. 2014 Jun;76(6):472-6. doi: 10.1016/j.jpsychores.2014.03.003. Epub 2014 Mar 24.


Cultivation and isolation of N2-fixing bacteria from suboxic waters in the Baltic Sea.

Bentzon-Tilia M, Farnelid H, Jürgens K, Riemann L.

FEMS Microbiol Ecol. 2014 May;88(2):358-71. doi: 10.1111/1574-6941.12304. Epub 2014 Mar 20.


Abundance of broad bacterial taxa in the sargasso sea explained by environmental conditions but not water mass.

Sjöstedt J, Martiny JB, Munk P, Riemann L.

Appl Environ Microbiol. 2014 May;80(9):2786-95. doi: 10.1128/AEM.00099-14. Epub 2014 Feb 21.


Isolation of heterotrophic diazotrophic bacteria from estuarine surface waters.

Farnelid H, Harder J, Bentzon-Tilia M, Riemann L.

Environ Microbiol. 2014 Oct;16(10):3072-82. doi: 10.1111/1462-2920.12335. Epub 2013 Dec 16.


Antagonistic coevolution of marine planktonic viruses and their hosts.

Martiny JB, Riemann L, Marston MF, Middelboe M.

Ann Rev Mar Sci. 2014;6:393-414. doi: 10.1146/annurev-marine-010213-135108. Epub 2013 Aug 28. Review.


Twelve previously unknown phage genera are ubiquitous in global oceans.

Holmfeldt K, Solonenko N, Shah M, Corrier K, Riemann L, Verberkmoes NC, Sullivan MB.

Proc Natl Acad Sci U S A. 2013 Jul 30;110(31):12798-803. doi: 10.1073/pnas.1305956110. Epub 2013 Jul 15.


Functional and compositional succession of bacterioplankton in response to a gradient in bioavailable dissolved organic carbon.

Dinasquet J, Kragh T, Schrøter ML, Søndergaard M, Riemann L.

Environ Microbiol. 2013 Sep;15(9):2616-28. doi: 10.1111/1462-2920.12178. Epub 2013 Jul 4.


Dominant petroleum hydrocarbon-degrading bacteria in the Archipelago Sea in South-West Finland (Baltic Sea) belong to different taxonomic groups than hydrocarbon degraders in the oceans.

Reunamo A, Riemann L, Leskinen P, Jørgensen KS.

Mar Pollut Bull. 2013 Jul 15;72(1):174-80. doi: 10.1016/j.marpolbul.2013.04.006. Epub 2013 May 24.


Consequences of increased temperature and acidification on bacterioplankton community composition during a mesocosm spring bloom in the Baltic Sea.

Lindh MV, Riemann L, Baltar F, Romero-Oliva C, Salomon PS, Granéli E, Pinhassi J.

Environ Microbiol Rep. 2013 Apr;5(2):252-62. doi: 10.1111/1758-2229.12009. Epub 2012 Nov 15.


Molecular and functional ecology of aquatic microbial symbionts.

Grossart HP, Riemann L, Tang KW.

Front Microbiol. 2013 Mar 15;4:59. doi: 10.3389/fmicb.2013.00059. eCollection 2013. No abstract available.


Active nitrogen-fixing heterotrophic bacteria at and below the chemocline of the central Baltic Sea.

Farnelid H, Bentzon-Tilia M, Andersson AF, Bertilsson S, Jost G, Labrenz M, Jürgens K, Riemann L.

ISME J. 2013 Jul;7(7):1413-23. doi: 10.1038/ismej.2013.26. Epub 2013 Feb 28.


Role for urea in nitrification by polar marine Archaea.

Alonso-Sáez L, Waller AS, Mende DR, Bakker K, Farnelid H, Yager PL, Lovejoy C, Tremblay JÉ, Potvin M, Heinrich F, Estrada M, Riemann L, Bork P, Pedrós-Alió C, Bertilsson S.

Proc Natl Acad Sci U S A. 2012 Oct 30;109(44):17989-94. doi: 10.1073/pnas.1201914109. Epub 2012 Oct 1.


Stimulated bacterioplankton growth and selection for certain bacterial taxa in the vicinity of the ctenophore Mnemiopsis leidyi.

Dinasquet J, Granhag L, Riemann L.

Front Microbiol. 2012 Aug 16;3:302. doi: 10.3389/fmicb.2012.00302. eCollection 2012.


Recruitment of members from the rare biosphere of marine bacterioplankton communities after an environmental disturbance.

Sjöstedt J, Koch-Schmidt P, Pontarp M, Canbäck B, Tunlid A, Lundberg P, Hagström A, Riemann L.

Appl Environ Microbiol. 2012 Mar;78(5):1361-9. doi: 10.1128/AEM.05542-11. Epub 2011 Dec 22.


Cultivated single-stranded DNA phages that infect marine Bacteroidetes prove difficult to detect with DNA-binding stains.

Holmfeldt K, Odić D, Sullivan MB, Middelboe M, Riemann L.

Appl Environ Microbiol. 2012 Feb;78(3):892-4. doi: 10.1128/AEM.06580-11. Epub 2011 Dec 2.


Nitrogenase gene amplicons from global marine surface waters are dominated by genes of non-cyanobacteria.

Farnelid H, Andersson AF, Bertilsson S, Al-Soud WA, Hansen LH, Sørensen S, Steward GF, Hagström Å, Riemann L.

PLoS One. 2011 Apr 29;6(4):e19223. doi: 10.1371/journal.pone.0019223.


All roads lead to home: panmixia of European eel in the Sargasso Sea.

Als TD, Hansen MM, Maes GE, Castonguay M, Riemann L, Aarestrup K, Munk P, Sparholt H, Hanel R, Bernatchez L.

Mol Ecol. 2011 Apr;20(7):1333-46. doi: 10.1111/j.1365-294X.2011.05011.x. Epub 2011 Feb 7.


Oceanic fronts in the Sargasso Sea control the early life and drift of Atlantic eels.

Munk P, Hansen MM, Maes GE, Nielsen TG, Castonguay M, Riemann L, Sparholt H, Als TD, Aarestrup K, Andersen NG, Bachler M.

Proc Biol Sci. 2010 Dec 7;277(1700):3593-9. doi: 10.1098/rspb.2010.0900. Epub 2010 Jun 23.


Qualitative assessment of the diet of European eel larvae in the Sargasso Sea resolved by DNA barcoding.

Riemann L, Alfredsson H, Hansen MM, Als TD, Nielsen TG, Munk P, Aarestrup K, Maes GE, Sparholt H, Petersen MI, Bachler M, Castonguay M.

Biol Lett. 2010 Dec 23;6(6):819-22. doi: 10.1098/rsbl.2010.0411. Epub 2010 Jun 23.


Virus production and lysate recycling in different sub-basins of the northern Baltic Sea.

Holmfeldt K, Titelman J, Riemann L.

Microb Ecol. 2010 Oct;60(3):572-80. doi: 10.1007/s00248-010-9668-8. Epub 2010 Apr 21.


Pyrosequencing reveals contrasting seasonal dynamics of taxa within Baltic Sea bacterioplankton communities.

Andersson AF, Riemann L, Bertilsson S.

ISME J. 2010 Feb;4(2):171-81. doi: 10.1038/ismej.2009.108. Epub 2009 Oct 15.


Viral control of bacterial biodiversity--evidence from a nutrient-enriched marine mesocosm experiment.

Sandaa RA, Gómez-Consarnau L, Pinhassi J, Riemann L, Malits A, Weinbauer MG, Gasol JM, Thingstad TF.

Environ Microbiol. 2009 Oct;11(10):2585-97. doi: 10.1111/j.1462-2920.2009.01983.x. Epub 2009 Jun 24.


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