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Items: 29

1.

JASPAR 2020: update of the open-access database of transcription factor binding profiles.

Fornes O, Castro-Mondragon JA, Khan A, van der Lee R, Zhang X, Richmond PA, Modi BP, Correard S, Gheorghe M, Baranašić D, Santana-Garcia W, Tan G, Chèneby J, Ballester B, Parcy F, Sandelin A, Lenhard B, Wasserman WW, Mathelier A.

Nucleic Acids Res. 2019 Nov 8. pii: gkz1001. doi: 10.1093/nar/gkz1001. [Epub ahead of print]

PMID:
31701148
2.

Introduction to Genomic Analysis Workshop: A catalyst for engaging life-science researchers in high throughput analysis.

Richmond PA, Wasserman WW.

F1000Res. 2019 Jul 30;8:1221. doi: 10.12688/f1000research.19320.1. eCollection 2019.

3.

Identifying, understanding, and correcting technical artifacts on the sex chromosomes in next-generation sequencing data.

Webster TH, Couse M, Grande BM, Karlins E, Phung TN, Richmond PA, Whitford W, Wilson MA.

Gigascience. 2019 Jul 1;8(7). pii: giz074. doi: 10.1093/gigascience/giz074.

4.

Glutaminase Deficiency Caused by Short Tandem Repeat Expansion in GLS.

van Kuilenburg ABP, Tarailo-Graovac M, Richmond PA, Drögemöller BI, Pouladi MA, Leen R, Brand-Arzamendi K, Dobritzsch D, Dolzhenko E, Eberle MA, Hayward B, Jones MJ, Karbassi F, Kobor MS, Koster J, Kumari D, Li M, MacIsaac J, McDonald C, Meijer J, Nguyen C, Rajan-Babu IS, Scherer SW, Sim B, Trost B, Tseng LA, Turkenburg M, van Vugt JJFA, Veldink JH, Walia JS, Wang Y, van Weeghel M, Wright GEB, Xu X, Yuen RKC, Zhang J, Ross CJ, Wasserman WW, Geraghty MT, Santra S, Wanders RJA, Wen XY, Waterham HR, Usdin K, van Karnebeek CDM.

N Engl J Med. 2019 Apr 11;380(15):1433-1441. doi: 10.1056/NEJMoa1806627.

PMID:
30970188
5.

MANTA2, update of the Mongo database for the analysis of transcription factor binding site alterations.

Fornes O, Gheorghe M, Richmond PA, Arenillas DJ, Wasserman WW, Mathelier A.

Sci Data. 2018 Jul 24;5:180141. doi: 10.1038/sdata.2018.141.

6.

Genome-wide dose-dependent inhibition of histone deacetylases studies reveal their roles in enhancer remodeling and suppression of oncogenic super-enhancers.

Sanchez GJ, Richmond PA, Bunker EN, Karman SS, Azofeifa J, Garnett AT, Xu Q, Wheeler GE, Toomey CM, Zhang Q, Dowell RD, Liu X.

Nucleic Acids Res. 2018 Feb 28;46(4):1756-1776. doi: 10.1093/nar/gkx1225.

7.

The Influence of Polyploidy on the Evolution of Yeast Grown in a Sub-Optimal Carbon Source.

Scott AL, Richmond PA, Dowell RD, Selmecki AM.

Mol Biol Evol. 2017 Oct 1;34(10):2690-2703. doi: 10.1093/molbev/msx205.

8.

Evidence for Association Between Low Frequency Variants in CHRNA6/CHRNB3 and Antisocial Drug Dependence.

Kamens HM, Corley RP, Richmond PA, Darlington TM, Dowell R, Hopfer CJ, Stallings MC, Hewitt JK, Brown SA, Ehringer MA.

Behav Genet. 2016 Sep;46(5):693-704. doi: 10.1007/s10519-016-9792-4. Epub 2016 Apr 16.

9.

A trans-acting Variant within the Transcription Factor RIM101 Interacts with Genetic Background to Determine its Regulatory Capacity.

Read T, Richmond PA, Dowell RD.

PLoS Genet. 2016 Jan 11;12(1):e1005746. doi: 10.1371/journal.pgen.1005746. eCollection 2016 Jan.

10.

Prolonged Cre expression driven by the α-myosin heavy chain promoter can be cardiotoxic.

Pugach EK, Richmond PA, Azofeifa JG, Dowell RD, Leinwand LA.

J Mol Cell Cardiol. 2015 Sep;86:54-61. doi: 10.1016/j.yjmcc.2015.06.019. Epub 2015 Jul 2.

11.

Quantitative trait locus mapping of acute functional tolerance in the LXS recombinant inbred strains.

Bennett B, Larson C, Richmond PA, Odell AT, Saba LM, Tabakoff B, Dowell R, Radcliffe RA.

Alcohol Clin Exp Res. 2015 Apr;39(4):611-20. doi: 10.1111/acer.12678.

12.

Polyploidy can drive rapid adaptation in yeast.

Selmecki AM, Maruvka YE, Richmond PA, Guillet M, Shoresh N, Sorenson AL, De S, Kishony R, Michor F, Dowell R, Pellman D.

Nature. 2015 Mar 19;519(7543):349-52. doi: 10.1038/nature14187. Epub 2015 Mar 2.

13.

C.O.M.E. be a nurse manager.

Richmond PA, Book K, Hicks M, Pimpinella A, Jenner CA.

Nurs Manage. 2009 Feb;40(2):52-4. doi: 10.1097/01.NUMA.0000345875.99318.82. No abstract available.

PMID:
19194252
14.

All Kids Count Connections: a community of practice on integrating child health information systems.

Wild EL, Richmond PA, de Merode L, Smith JD.

J Public Health Manag Pract. 2004 Nov;Suppl:S61-5.

PMID:
15643361
15.

All Kids Count 1991-2004: developing information systems to improve child health and the delivery of immunizations and preventive services.

Saarlas KN, Hinman AR, Ross DA, Watson WC Jr, Wild EL, Hastings TM, Richmond PA.

J Public Health Manag Pract. 2004 Nov;Suppl:S3-15.

PMID:
15643355
16.

Characterization of a basic helix-loop-helix protein, ABF-1: nuclear localization, transcriptional properties, and interaction with Id-2.

Wong J, Funes-Duran M, Ahlberg J, Round J, O'Connell R, Miller R, Chen E, Richmond PA, Vierra CA.

DNA Cell Biol. 2001 Aug;20(8):465-71.

PMID:
11560778
17.

Cell wall synthesis during growth and maturation of Nitella internodal cells.

Morrison JC, Greve LC, Richmond PA.

Planta. 1993 Mar;189(3):321-8. doi: 10.1007/BF00194428.

PMID:
24178488
18.

Cell expansion patterns and directionality of wall mechanical properties in nitella.

Richmond PA, Métraux JP, Taiz L.

Plant Physiol. 1980 Feb;65(2):211-7.

19.
20.

The germ theory of disease.

Richmond PA.

Henry E Sigerist Suppl Bull Hist Med. 1980;(4):84-98. No abstract available.

PMID:
7012100
21.

Manual enucleation of Xenopus oocytes.

Feldherr CM, Richmond PA.

Methods Cell Biol. 1978;17:75-9. No abstract available.

PMID:
703624
22.

The distribution of ConA-binding sites on oocyte nuclear envelopes.

Feldherr CM, Richmond PA, Noonan KD.

Exp Cell Res. 1977 Jul;107(2):439-44. No abstract available.

PMID:
559581
23.

The localization of the nuclear protein pool in Xenopus oocytes.

Feldherr CM, Richmond PA.

Exp Cell Res. 1976 Jul;100(2):417-9. No abstract available.

PMID:
945775
24.

Tissue culture method for bovine mammary tissue: lactose synthesis.

Richmond PA, Hood LF.

J Dairy Sci. 1973 May;56(5):611-4. No abstract available.

25.
26.

The Hotel-Dieu of Paris on the eve of the revolution.

RICHMOND PA.

J Hist Med Allied Sci. 1961 Oct;16:335-53. No abstract available.

PMID:
14492024
27.

The nineteenth century American physician as a research scientist.

RICHMOND PA.

Int Rec Med Gen Pract Clin. 1958 Aug;171(8):492-506. No abstract available.

PMID:
13562949
28.

American attitudes toward the germ theory of disease (1860-1880).

RICHMOND PA.

J Hist Med Allied Sci. 1954 Oct;9(4):428-54. No abstract available.

PMID:
13212029
29.

Some variant theories in opposition to the germ theory of disease.

RICHMOND PA.

J Hist Med Allied Sci. 1954 Jul;9(3):290-303. No abstract available.

PMID:
13184122

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