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Items: 1 to 50 of 90

1.

Emerging concepts in pseudoenzyme classification, evolution, and signaling.

Ribeiro AJM, Das S, Dawson N, Zaru R, Orchard S, Thornton JM, Orengo C, Zeqiraj E, Murphy JM, Eyers PA.

Sci Signal. 2019 Aug 13;12(594). pii: eaat9797. doi: 10.1126/scisignal.aat9797. Review.

PMID:
31409758
2.

Allele-Specific Silencing Ameliorates Restrictive Cardiomyopathy Due to a Human Myosin Regulatory Light Chain Mutation.

Zaleta-Rivera K, Dainis A, Ribeiro AJS, Sanchez Cordero P, Rubio G, Shang C, Liu J, Finsterbach T, Parikh VN, Sutton S, Seo K, Sinha N, Jain N, Huang Y, Hajjar RJ, Kay MA, Szczesna-Cordary D, Pruitt BL, Wheeler MT, Ashley EA.

Circulation. 2019 Jul 18. doi: 10.1161/CIRCULATIONAHA.118.036965. [Epub ahead of print]

PMID:
31315475
3.

Comparison of ELISA and HPLC-MS methods for the determination of exenatide in biological and biotechnology-based formulation matrices.

Pinho AR, Fortuna A, Falcão A, Santos AC, Seiça R, Estevens C, Veiga F, Ribeiro AJ.

J Pharm Anal. 2019 Jun;9(3):143-155. doi: 10.1016/j.jpha.2019.02.001. Epub 2019 Feb 26. Review.

4.

Nanotechnology-based formulations for resveratrol delivery: Effects on resveratrol in vivo bioavailability and bioactivity.

Santos AC, Pereira I, Pereira-Silva M, Ferreira L, Caldas M, Collado-González M, Magalhães M, Figueiras A, Ribeiro AJ, Veiga F.

Colloids Surf B Biointerfaces. 2019 Aug 1;180:127-140. doi: 10.1016/j.colsurfb.2019.04.030. Epub 2019 Apr 15. Review.

PMID:
31035056
5.

Targeting Cancer Via Resveratrol-Loaded Nanoparticles Administration: Focusing on In Vivo Evidence.

Santos AC, Pereira I, Magalhães M, Pereira-Silva M, Caldas M, Ferreira L, Figueiras A, Ribeiro AJ, Veiga F.

AAPS J. 2019 Apr 23;21(4):57. doi: 10.1208/s12248-019-0325-y.

PMID:
31016543
6.

Liver Microphysiological Systems for Predicting and Evaluating Drug Effects.

Ribeiro AJS, Yang X, Patel V, Madabushi R, Strauss DG.

Clin Pharmacol Ther. 2019 Jul;106(1):139-147. doi: 10.1002/cpt.1458. Epub 2019 Jun 4. Review.

PMID:
30993668
7.

First-time oral administration of resveratrol-loaded layer-by-layer nanoparticles to rats - a pharmacokinetics study.

Santos AC, Veiga FJ, Sequeira JAD, Fortuna A, Falcão A, Pereira I, Pattekari P, Fontes-Ribeiro C, Ribeiro AJ.

Analyst. 2019 Mar 21;144(6):2062-2079. doi: 10.1039/c8an01998c. Epub 2019 Feb 6.

PMID:
30724915
8.

Subcutaneous delivery of biotherapeutics: challenges at the injection site.

Sequeira JAD, Santos AC, Serra J, Estevens C, Seiça R, Veiga F, Ribeiro AJ.

Expert Opin Drug Deliv. 2019 Feb;16(2):143-151. doi: 10.1080/17425247.2019.1568408. Epub 2019 Jan 24. Review.

PMID:
30632401
9.

Solvent-free synthesis of acetylated cashew gum for oral delivery system of insulin.

Vasconcelos Silva EL, Oliveira ACJ, Patriota YBG, Ribeiro AJ, Veiga F, Hallwass F, Silva-Filho EC, da Silva DA, Soares MFR, Wanderley AG, Soares-Sobrinho JL.

Carbohydr Polym. 2019 Mar 1;207:601-608. doi: 10.1016/j.carbpol.2018.11.071. Epub 2018 Nov 23.

PMID:
30600045
10.

Subcutaneous delivery of monoclonal antibodies: How do we get there?

Viola M, Sequeira J, Seiça R, Veiga F, Serra J, Santos AC, Ribeiro AJ.

J Control Release. 2018 Sep 28;286:301-314. doi: 10.1016/j.jconrel.2018.08.001. Epub 2018 Aug 2. Review.

PMID:
30077735
11.

Aneurisma isolado de artéria femoral superficial roto contido: relato de caso.

Damasceno DCF, Evaristo JB, Felipe G Júnior, Câmara ALG, Kalume CE, Ribeiro AJA, Nóbrega LPS.

J Vasc Bras. 2017 Oct-Dec;16(4):348-354. doi: 10.1590/1677-5449.007517. Portuguese. No abstract available.

PMID:
29930673
Free PMC Article
12.

Halloysite clay nanotubes for life sciences applications: From drug encapsulation to bioscaffold.

Santos AC, Ferreira C, Veiga F, Ribeiro AJ, Panchal A, Lvov Y, Agarwal A.

Adv Colloid Interface Sci. 2018 Jul;257:58-70. doi: 10.1016/j.cis.2018.05.007. Epub 2018 May 31. Review.

PMID:
29887382
13.

Transform-MinER: transforming molecules in enzyme reactions.

Tyzack JD, Ribeiro AJM, Borkakoti N, Thornton JM.

Bioinformatics. 2018 Oct 15;34(20):3597-3599. doi: 10.1093/bioinformatics/bty394.

14.

Ranking Enzyme Structures in the PDB by Bound Ligand Similarity to Biological Substrates.

Tyzack JD, Fernando L, Ribeiro AJM, Borkakoti N, Thornton JM.

Structure. 2018 Apr 3;26(4):565-571.e3. doi: 10.1016/j.str.2018.02.009. Epub 2018 Mar 15.

15.

Controlling cell shape on hydrogels using lift-off protein patterning.

Moeller J, Denisin AK, Sim JY, Wilson RE, Ribeiro AJS, Pruitt BL.

PLoS One. 2018 Jan 3;13(1):e0189901. doi: 10.1371/journal.pone.0189901. eCollection 2018.

16.

In vivo assessment of a novel biodegradable ureteral stent.

Barros AA, Oliveira C, Ribeiro AJ, Autorino R, Reis RL, Duarte ARC, Lima E.

World J Urol. 2018 Feb;36(2):277-283. doi: 10.1007/s00345-017-2124-3. Epub 2017 Nov 11.

PMID:
29128964
17.

Mechanism and Catalytic Site Atlas (M-CSA): a database of enzyme reaction mechanisms and active sites.

Ribeiro AJM, Holliday GL, Furnham N, Tyzack JD, Ferris K, Thornton JM.

Nucleic Acids Res. 2018 Jan 4;46(D1):D618-D623. doi: 10.1093/nar/gkx1012.

18.

cuRRBS: simple and robust evaluation of enzyme combinations for reduced representation approaches.

Martin-Herranz DE, Ribeiro AJM, Krueger F, Thornton JM, Reik W, Stubbs TM.

Nucleic Acids Res. 2017 Nov 16;45(20):11559-11569. doi: 10.1093/nar/gkx814.

19.

A BAG3 chaperone complex maintains cardiomyocyte function during proteotoxic stress.

Judge LM, Perez-Bermejo JA, Truong A, Ribeiro AJ, Yoo JC, Jensen CL, Mandegar MA, Huebsch N, Kaake RM, So PL, Srivastava D, Pruitt BL, Krogan NJ, Conklin BR.

JCI Insight. 2017 Jul 20;2(14). pii: 94623. doi: 10.1172/jci.insight.94623. eCollection 2017 Jul 20.

20.

Molecular dynamics simulations reveal the influence of dextran sulfate in nanoparticle formation with calcium alginate to encapsulate insulin.

Nadvorny D, Soares-Sobrinho JL, de La Roca Soares MF, Ribeiro AJ, Veiga F, Seabra GM.

J Biomol Struct Dyn. 2018 Apr;36(5):1255-1260. doi: 10.1080/07391102.2017.1318305. Epub 2017 Apr 24. No abstract available.

PMID:
28438077
21.

Multi-Imaging Method to Assay the Contractile Mechanical Output of Micropatterned Human iPSC-Derived Cardiac Myocytes.

Ribeiro AJS, Schwab O, Mandegar MA, Ang YS, Conklin BR, Srivastava D, Pruitt BL.

Circ Res. 2017 May 12;120(10):1572-1583. doi: 10.1161/CIRCRESAHA.116.310363. Epub 2017 Apr 11. Review.

22.

Unique Triphenylphosphonium Derivatives for Enhanced Mitochondrial Uptake and Photodynamic Therapy.

Hu Z, Sim Y, Kon OL, Ng WH, Ribeiro AJ, Ramos MJ, Fernandes PA, Ganguly R, Xing B, García F, Yeow EK.

Bioconjug Chem. 2017 Feb 15;28(2):590-599. doi: 10.1021/acs.bioconjchem.6b00682. Epub 2017 Jan 18.

PMID:
28049291
23.

Disease Model of GATA4 Mutation Reveals Transcription Factor Cooperativity in Human Cardiogenesis.

Ang YS, Rivas RN, Ribeiro AJS, Srivas R, Rivera J, Stone NR, Pratt K, Mohamed TMA, Fu JD, Spencer CI, Tippens ND, Li M, Narasimha A, Radzinsky E, Moon-Grady AJ, Yu H, Pruitt BL, Snyder MP, Srivastava D.

Cell. 2016 Dec 15;167(7):1734-1749.e22. doi: 10.1016/j.cell.2016.11.033.

24.

Characterization of polymeric nanoparticles for intravenous delivery: Focus on stability.

Oliveira CL, Veiga F, Varela C, Roleira F, Tavares E, Silveira I, Ribeiro AJ.

Colloids Surf B Biointerfaces. 2017 Feb 1;150:326-333. doi: 10.1016/j.colsurfb.2016.10.046. Epub 2016 Oct 29.

PMID:
27823851
25.

Binding free energy calculations on E-selectin complexes with sLex oligosaccharide analogs.

Barra PA, Ribeiro AJ, Ramos MJ, Jiménez VA, Alderete JB, Fernandes PA.

Chem Biol Drug Des. 2017 Jan;89(1):114-123. doi: 10.1111/cbdd.12837. Epub 2016 Sep 21.

PMID:
27515911
26.

Preparation methods and applications behind alginate-based particles.

Lopes M, Abrahim B, Veiga F, Seiça R, Cabral LM, Arnaud P, Andrade JC, Ribeiro AJ.

Expert Opin Drug Deliv. 2017 Jun;14(6):769-782. doi: 10.1080/17425247.2016.1214564. Epub 2016 Aug 5. Review.

PMID:
27492462
27.

Avaliação da influência de alterações cardíacas na ultrassonografia vascular periférica de idosos.

Ribeiro AJA, Ribeiro ACO, Rodrigues MMM, Negreiros SBC, Nogueira ACC, Almeida OLR, Silva JCQE, de Paula AP.

J Vasc Bras. 2016 Jul-Sep;15(3):205-209. doi: 10.1590/1677-5449.010015. Portuguese. No abstract available.

PMID:
29930591
Free PMC Article
28.

Recent Advances in Nucleic Acid-Based Delivery: From Bench to Clinical Trials in Genetic Diseases.

Oliveira C, Ribeiro AJ, Veiga F, Silveira I.

J Biomed Nanotechnol. 2016 May;12(5):841-62. Review.

PMID:
27305810
29.

Gums' based delivery systems: Review on cashew gum and its derivatives.

Ribeiro AJ, de Souza FRL, Bezerra JMNA, Oliveira C, Nadvorny D, de La Roca Soares MF, Nunes LCC, Silva-Filho EC, Veiga F, Soares Sobrinho JL.

Carbohydr Polym. 2016 Aug 20;147:188-200. doi: 10.1016/j.carbpol.2016.02.042. Epub 2016 Feb 18. Review.

PMID:
27178924
30.

Improving the Biodesulfurization of Crude Oil and Derivatives: A QM/MM Investigation of the Catalytic Mechanism of NADH-FMN Oxidoreductase (DszD).

Sousa SF, Sousa JF, Barbosa AC, Ferreira CE, Neves RP, Ribeiro AJ, Fernandes PA, Ramos MJ.

J Phys Chem A. 2016 Jul 14;120(27):5300-6. doi: 10.1021/acs.jpca.6b01536. Epub 2016 May 9.

PMID:
27128525
31.

Time-dependent evolution of functional vs. remodeling signaling in induced pluripotent stem cell-derived cardiomyocytes and induced maturation with biomechanical stimulation.

Jung G, Fajardo G, Ribeiro AJ, Kooiker KB, Coronado M, Zhao M, Hu DQ, Reddy S, Kodo K, Sriram K, Insel PA, Wu JC, Pruitt BL, Bernstein D.

FASEB J. 2016 Apr;30(4):1464-79. doi: 10.1096/fj.15-280982. Epub 2015 Dec 16.

32.

Catalytic Mechanism of Retroviral Integrase for the Strand Transfer Reaction Explored by QM/MM Calculations.

Araújo AR, Ribeiro AJ, Fernandes PA, Ramos MJ.

J Chem Theory Comput. 2014 Dec 9;10(12):5458-66. doi: 10.1021/ct500570g.

PMID:
26583229
33.

Probing insulin bioactivity in oral nanoparticles produced by ultrasonication-assisted emulsification/internal gelation.

Lopes MA, Abrahim-Vieira B, Oliveira C, Fonte P, Souza AM, Lira T, Sequeira JA, Rodrigues CR, Cabral LM, Sarmento B, Seiça R, Veiga F, Ribeiro AJ.

Int J Nanomedicine. 2015 Sep 18;10:5865-80. doi: 10.2147/IJN.S86313. eCollection 2015.

34.

Contractility of single cardiomyocytes differentiated from pluripotent stem cells depends on physiological shape and substrate stiffness.

Ribeiro AJ, Ang YS, Fu JD, Rivas RN, Mohamed TM, Higgs GC, Srivastava D, Pruitt BL.

Proc Natl Acad Sci U S A. 2015 Oct 13;112(41):12705-10. doi: 10.1073/pnas.1508073112. Epub 2015 Sep 28.

35.

For whom the cells pull: Hydrogel and micropost devices for measuring traction forces.

Ribeiro AJ, Denisin AK, Wilson RE, Pruitt BL.

Methods. 2016 Feb 1;94:51-64. doi: 10.1016/j.ymeth.2015.08.005. Epub 2015 Aug 8. Review.

36.

Synthesis and Hydrolytic Studies on the Air-Stable [(4-CN-PhO)(E)P(μ-N(t)Bu)]2 (E = O, S, and Se) Cyclodiphosphazanes.

Shi YX, Liang RZ, Martin KA, Weston N, Gonzalez-Calera S, Ganguly R, Li Y, Lu Y, Ribeiro AJ, Ramos MJ, Fernandes PA, García F.

Inorg Chem. 2015 Jul 6;54(13):6423-32. doi: 10.1021/acs.inorgchem.5b00735. Epub 2015 Jun 12.

PMID:
26068578
37.

Sonication-Assisted Layer-by-Layer Assembly for Low Solubility Drug Nanoformulation.

Santos AC, Pattekari P, Jesus S, Veiga F, Lvov Y, Ribeiro AJ.

ACS Appl Mater Interfaces. 2015 Jun 10;7(22):11972-83. doi: 10.1021/acsami.5b02002. Epub 2015 May 27.

PMID:
25985366
38.

New insights in the catalytic mechanism of tyrosine ammonia-lyase given by QM/MM and QM cluster models.

Pinto GP, Ribeiro AJ, Ramos MJ, Fernandes PA, Toscano M, Russo N.

Arch Biochem Biophys. 2015 Sep 15;582:107-15. doi: 10.1016/j.abb.2015.03.002. Epub 2015 Mar 12.

PMID:
25772386
39.

Nuclear stiffening inhibits migration of invasive melanoma cells.

Ribeiro AJ, Khanna P, Sukumar A, Dong C, Dahl KN.

Cell Mol Bioeng. 2014 Dec 1;7(4):544-551.

40.

Microfluidic assisted one-step fabrication of porous silicon@acetalated dextran nanocomposites for precisely controlled combination chemotherapy.

Liu D, Zhang H, Mäkilä E, Fan J, Herranz-Blanco B, Wang CF, Rosa R, Ribeiro AJ, Salonen J, Hirvonen J, Santos HA.

Biomaterials. 2015 Jan;39:249-59. doi: 10.1016/j.biomaterials.2014.10.079. Epub 2014 Nov 20.

PMID:
25468375
41.

Intestinal uptake of insulin nanoparticles: facts or myths?

Lopes MA, Abrahim BA, Seiça R, Veiga F, Rodrigues CR, Ribeiro AJ.

Curr Pharm Biotechnol. 2014;15(7):629-38. Review.

PMID:
25219866
42.

Editorial: nanotechnology as a strategy to improve treatment of diabetes.

Ribeiro AJ.

Curr Pharm Biotechnol. 2014;15(7):589. No abstract available.

PMID:
25219862
43.

Recent advances in characterization of nonviral vectors for delivery of nucleic acids: impact on their biological performance.

Oliveira C, Silveira I, Veiga F, Ribeiro AJ.

Expert Opin Drug Deliv. 2015 Jan;12(1):27-39. doi: 10.1517/17425247.2014.945421. Epub 2014 Aug 21. Review.

PMID:
25141765
44.

Stable, covalent attachment of laminin to microposts improves the contractility of mouse neonatal cardiomyocytes.

Ribeiro AJ, Zaleta-Rivera K, Ashley EA, Pruitt BL.

ACS Appl Mater Interfaces. 2014 Sep 10;6(17):15516-26. doi: 10.1021/am5042324. Epub 2014 Aug 26.

45.

Analyses of cobalt-ligand and potassium-ligand bond lengths in metalloproteins: trends and patterns.

Brás NF, Ribeiro AJ, Oliveira M, Paixão NM, Tamames JA, Fernandes PA, Ramos MJ.

J Mol Model. 2014 Jun;20(6):2271. doi: 10.1007/s00894-014-2271-z. Epub 2014 May 22.

PMID:
24850495
46.

Divalent metal ion-based catalytic mechanism of the Nudix hydrolase Orf153 (YmfB) from Escherichia coli.

Hong MK, Ribeiro AJ, Kim JK, Ngo HP, Kim J, Lee CH, Ahn YJ, Fernandes PA, Li Q, Ramos MJ, Kang LW.

Acta Crystallogr D Biol Crystallogr. 2014 May;70(Pt 5):1297-310. doi: 10.1107/S1399004714002570. Epub 2014 Apr 29.

PMID:
24816099
47.

Hybrid nanotopographical surfaces obtained by biomimetic mineralization of statherin-inspired elastin-like recombinamers.

Li Y, Chen X, Ribeiro AJ, Jensen ED, Holmberg KV, Rodriguez-Cabello JC, Aparicio C.

Adv Healthc Mater. 2014 Oct;3(10):1638-47. doi: 10.1002/adhm.201400015. Epub 2014 Apr 2.

PMID:
24700504
48.

Intestinal absorption of insulin nanoparticles: contribution of M cells.

Lopes MA, Abrahim BA, Cabral LM, Rodrigues CR, Seiça RM, de Baptista Veiga FJ, Ribeiro AJ.

Nanomedicine. 2014 Aug;10(6):1139-51. doi: 10.1016/j.nano.2014.02.014. Epub 2014 Mar 12. Review.

PMID:
24632248
49.

Crystalline forms of nonprotein drugs filed in Brazil from 1995-2005.

Lira LM, da Silva LC, Ribeiro AJ, Veiga F, Rodrigues CR, do Carmo FA, de Sousa VP, Cabral LM.

Pharm Pat Anal. 2014 Mar;3(2):151-61. doi: 10.4155/ppa.14.5.

PMID:
24588592
50.

Cutaneous leishmaniosis in a horse from northern Portugal.

Gama A, Elias J, Ribeiro AJ, Alegria N, Schallig HD, Silva F, Santarém N, Cardoso L, Cotovio M.

Vet Parasitol. 2014 Feb 24;200(1-2):189-92. doi: 10.1016/j.vetpar.2013.12.005. Epub 2013 Dec 14.

PMID:
24388338

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