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Items: 1 to 50 of 66

1.

Fission yeast cells grow approximately exponentially.

Pickering M, Hollis LN, D'Souza E, Rhind N.

Cell Cycle. 2019 Apr;18(8):869-879. doi: 10.1080/15384101.2019.1595874. Epub 2019 Apr 6.

PMID:
30957637
2.

Transcriptome-wide Interrogation of the Functional Intronome by Spliceosome Profiling.

Chen W, Moore J, Ozadam H, Shulha HP, Rhind N, Weng Z, Moore MJ.

Cell. 2018 May 3;173(4):1031-1044.e13. doi: 10.1016/j.cell.2018.03.062.

3.

Cell Size Control via an Unstable Accumulating Activator and the Phenomenon of Excess Mitotic Delay.

Rhind N.

Bioessays. 2018 Feb;40(2). doi: 10.1002/bies.201700184. Epub 2017 Dec 28. Review.

PMID:
29283187
4.

Replication fork slowing and stalling are distinct, checkpoint-independent consequences of replicating damaged DNA.

Iyer DR, Rhind N.

PLoS Genet. 2017 Aug 14;13(8):e1006958. doi: 10.1371/journal.pgen.1006958. eCollection 2017 Aug.

5.

Analysis of DNA Replication in Fission Yeast by Combing.

Iyer DR, Das S, Rhind N.

Cold Spring Harb Protoc. 2018 Mar 1;2018(3). doi: 10.1101/pdb.prot092015.

PMID:
28733405
6.

Chromosome Mis-segregation Generates Cell-Cycle-Arrested Cells with Complex Karyotypes that Are Eliminated by the Immune System.

Santaguida S, Richardson A, Iyer DR, M'Saad O, Zasadil L, Knouse KA, Wong YL, Rhind N, Desai A, Amon A.

Dev Cell. 2017 Jun 19;41(6):638-651.e5. doi: 10.1016/j.devcel.2017.05.022.

7.

Global increase in replication fork speed during a p57KIP2-regulated erythroid cell fate switch.

Hwang Y, Futran M, Hidalgo D, Pop R, Iyer DR, Scully R, Rhind N, Socolovsky M.

Sci Adv. 2017 May 26;3(5):e1700298. doi: 10.1126/sciadv.1700298. eCollection 2017 May.

8.

Size-Dependent Expression of the Mitotic Activator Cdc25 Suggests a Mechanism of Size Control in Fission Yeast.

Keifenheim D, Sun XM, D'Souza E, Ohira MJ, Magner M, Mayhew MB, Marguerat S, Rhind N.

Curr Biol. 2017 May 22;27(10):1491-1497.e4. doi: 10.1016/j.cub.2017.04.016. Epub 2017 May 4.

9.

An estradiol-inducible promoter enables fast, graduated control of gene expression in fission yeast.

Ohira MJ, Hendrickson DG, Scott McIsaac R, Rhind N.

Yeast. 2017 Aug;34(8):323-334. doi: 10.1002/yea.3235. Epub 2017 Jun 8.

10.

The Intra-S Checkpoint Responses to DNA Damage.

Iyer DR, Rhind N.

Genes (Basel). 2017 Feb 17;8(2). pii: E74. doi: 10.3390/genes8020074. Review.

11.

Corrigendum: Replication timing is regulated by the number of MCMs loaded at origins.

Das SP, Borrman T, Liu VW, Yang SC, Bechhoefer J, Rhind N.

Genome Res. 2016 Dec;26(12):1761. No abstract available.

12.

Identification of S-phase DNA damage-response targets in fission yeast reveals conservation of damage-response networks.

Willis NA, Zhou C, Elia AE, Murray JM, Carr AM, Elledge SJ, Rhind N.

Proc Natl Acad Sci U S A. 2016 Jun 28;113(26):E3676-85. doi: 10.1073/pnas.1525620113. Epub 2016 Jun 13.

13.

How and why multiple MCMs are loaded at origins of DNA replication.

Das SP, Rhind N.

Bioessays. 2016 Jul;38(7):613-7. doi: 10.1002/bies.201600012. Epub 2016 May 13. Review.

14.

Discovery of genes involved in mitosis, cell division, cell wall integrity and chromosome segregation through construction of Schizosaccharomyces pombe deletion strains.

Chen JS, Beckley JR, Ren L, Feoktistova A, Jensen MA, Rhind N, Gould KL.

Yeast. 2016 Sep;33(9):507-17. doi: 10.1002/yea.3172. Epub 2016 Jun 29.

15.

Replication timing is regulated by the number of MCMs loaded at origins.

Das SP, Borrman T, Liu VW, Yang SC, Bechhoefer J, Rhind N.

Genome Res. 2015 Dec;25(12):1886-92. doi: 10.1101/gr.195305.115. Epub 2015 Sep 10. Erratum in: Genome Res. 2016 Dec;26(12 ):1761.

16.

Incorporation of thymidine analogs for studying replication kinetics in fission yeast.

Rhind N.

Methods Mol Biol. 2015;1300:99-104. doi: 10.1007/978-1-4939-2596-4_6.

17.

Identification of new players in cell division, DNA damage response, and morphogenesis through construction of Schizosaccharomyces pombe deletion strains.

Chen JS, Beckley JR, McDonald NA, Ren L, Mangione M, Jang SJ, Elmore ZC, Rachfall N, Feoktistova A, Jones CM, Willet AH, Guillen R, Bitton DA, Bähler J, Jensen MA, Rhind N, Gould KL.

G3 (Bethesda). 2014 Dec 31;5(3):361-70. doi: 10.1534/g3.114.015701.

18.

The three most important things about origins: location, location, location.

Rhind N.

Mol Syst Biol. 2014 Apr 4;10:723. doi: 10.1002/msb.145202.

19.

Endogenous U2·U5·U6 snRNA complexes in S. pombe are intron lariat spliceosomes.

Chen W, Shulha HP, Ashar-Patel A, Yan J, Green KM, Query CC, Rhind N, Weng Z, Moore MJ.

RNA. 2014 Mar;20(3):308-20. doi: 10.1261/rna.040980.113. Epub 2014 Jan 17.

20.

Checkpoint regulation of replication forks: global or local?

Iyer DR, Rhind N.

Biochem Soc Trans. 2013 Dec;41(6):1701-5. doi: 10.1042/BST20130197. Review.

21.

The DNA damage and the DNA replication checkpoints converge at the MBF transcription factor.

Ivanova T, Alves-Rodrigues I, Gómez-Escoda B, Dutta C, DeCaprio JA, Rhind N, Hidalgo E, Ayté J.

Mol Biol Cell. 2013 Nov;24(21):3350-7. doi: 10.1091/mbc.E13-05-0257. Epub 2013 Sep 4.

22.

Fission yeast nucleolar protein Dnt1 regulates G2/M transition and cytokinesis by downregulating Wee1 kinase.

Yu ZY, Zhang MT, Wang GY, Xu D, Keifenheim D, Franco A, Cansado J, Masuda H, Rhind N, Wang Y, Jin QW.

J Cell Sci. 2013 Nov 1;126(Pt 21):4995-5004. doi: 10.1242/jcs.132845. Epub 2013 Sep 4. Erratum in: J Cell Sci. 2014 Jan 1;127(Pt 1):259.

23.

DNA replication timing.

Rhind N, Gilbert DM.

Cold Spring Harb Perspect Biol. 2013 Aug 1;5(8):a010132. doi: 10.1101/cshperspect.a010132. Review.

24.

Signaling pathways that regulate cell division.

Rhind N, Russell P.

Cold Spring Harb Perspect Biol. 2012 Oct 1;4(10). pii: a005942. doi: 10.1101/cshperspect.a005942. Review.

25.

Genome-wide identification and characterization of replication origins by deep sequencing.

Xu J, Yanagisawa Y, Tsankov AM, Hart C, Aoki K, Kommajosyula N, Steinmann KE, Bochicchio J, Russ C, Regev A, Rando OJ, Nusbaum C, Niki H, Milos P, Weng Z, Rhind N.

Genome Biol. 2012 Apr 24;13(4):R27. doi: 10.1186/gb-2012-13-4-r27.

26.

Replication timing and its emergence from stochastic processes.

Bechhoefer J, Rhind N.

Trends Genet. 2012 Aug;28(8):374-81. doi: 10.1016/j.tig.2012.03.011. Epub 2012 Apr 18. Review. Erratum in: Trends Genet. 2014 Apr;30(4):160.

27.

Evolutionary divergence of intrinsic and trans-regulated nucleosome positioning sequences reveals plastic rules for chromatin organization.

Tsankov A, Yanagisawa Y, Rhind N, Regev A, Rando OJ.

Genome Res. 2011 Nov;21(11):1851-62. doi: 10.1101/gr.122267.111. Epub 2011 Sep 13.

28.

Studying S-phase DNA damage checkpoints using the fission yeast Schizosaccharomyces pombe.

Willis N, Rhind N.

Methods Mol Biol. 2011;782:13-21. doi: 10.1007/978-1-61779-273-1_2.

29.

Studying G2 DNA damage checkpoints using the fission yeast Schizosaccharomyces pombe.

Willis N, Rhind N.

Methods Mol Biol. 2011;782:1-12. doi: 10.1007/978-1-61779-273-1_1.

30.

Full-length transcriptome assembly from RNA-Seq data without a reference genome.

Grabherr MG, Haas BJ, Yassour M, Levin JZ, Thompson DA, Amit I, Adiconis X, Fan L, Raychowdhury R, Zeng Q, Chen Z, Mauceli E, Hacohen N, Gnirke A, Rhind N, di Palma F, Birren BW, Nusbaum C, Lindblad-Toh K, Friedman N, Regev A.

Nat Biotechnol. 2011 May 15;29(7):644-52. doi: 10.1038/nbt.1883.

31.

Comparative functional genomics of the fission yeasts.

Rhind N, Chen Z, Yassour M, Thompson DA, Haas BJ, Habib N, Wapinski I, Roy S, Lin MF, Heiman DI, Young SK, Furuya K, Guo Y, Pidoux A, Chen HM, Robbertse B, Goldberg JM, Aoki K, Bayne EH, Berlin AM, Desjardins CA, Dobbs E, Dukaj L, Fan L, FitzGerald MG, French C, Gujja S, Hansen K, Keifenheim D, Levin JZ, Mosher RA, Müller CA, Pfiffner J, Priest M, Russ C, Smialowska A, Swoboda P, Sykes SM, Vaughn M, Vengrova S, Yoder R, Zeng Q, Allshire R, Baulcombe D, Birren BW, Brown W, Ekwall K, Kellis M, Leatherwood J, Levin H, Margalit H, Martienssen R, Nieduszynski CA, Spatafora JW, Friedman N, Dalgaard JZ, Baumann P, Niki H, Regev A, Nusbaum C.

Science. 2011 May 20;332(6032):930-6. doi: 10.1126/science.1203357. Epub 2011 Apr 21.

32.

Mre11 nuclease activity and Ctp1 regulate Chk1 activation by Rad3ATR and Tel1ATM checkpoint kinases at double-strand breaks.

Limbo O, Porter-Goff ME, Rhind N, Russell P.

Mol Cell Biol. 2011 Feb;31(3):573-83. doi: 10.1128/MCB.00994-10. Epub 2010 Nov 22.

33.

Modeling genome-wide replication kinetics reveals a mechanism for regulation of replication timing.

Yang SC, Rhind N, Bechhoefer J.

Mol Syst Biol. 2010 Aug 24;6:404. doi: 10.1038/msb.2010.61.

34.

Reconciling stochastic origin firing with defined replication timing.

Rhind N, Yang SC, Bechhoefer J.

Chromosome Res. 2010 Jan;18(1):35-43. doi: 10.1007/s10577-009-9093-3.

35.

The fission yeast Rad32(Mre11)-Rad50-Nbs1 complex acts both upstream and downstream of checkpoint signaling in the S-phase DNA damage checkpoint.

Willis N, Rhind N.

Genetics. 2010 Apr;184(4):887-97. doi: 10.1534/genetics.109.113019. Epub 2010 Jan 11.

36.

The role of specific checkpoint-induced S-phase transcripts in resistance to replicative stress.

Dutta C, Rhind N.

PLoS One. 2009 Sep 11;4(9):e6944. doi: 10.1371/journal.pone.0006944.

37.

Regulation of DNA replication by the S-phase DNA damage checkpoint.

Willis N, Rhind N.

Cell Div. 2009 Jul 3;4:13. doi: 10.1186/1747-1028-4-13.

38.

Incorporation of thymidine analogs for studying replication kinetics in fission yeast.

Rhind N.

Methods Mol Biol. 2009;521:509-15. doi: 10.1007/978-1-60327-815-7_29.

39.

Changing of the guard: how ATM hands off DNA double-strand break signaling to ATR.

Rhind N.

Mol Cell. 2009 Mar 27;33(6):672-4. doi: 10.1016/j.molcel.2009.03.004.

40.

The role of MRN in the S-phase DNA damage checkpoint is independent of its Ctp1-dependent roles in double-strand break repair and checkpoint signaling.

Porter-Goff ME, Rhind N.

Mol Biol Cell. 2009 Apr;20(7):2096-107. doi: 10.1091/mbc.E08-09-0986. Epub 2009 Feb 11.

41.

Mus81, Rhp51(Rad51), and Rqh1 form an epistatic pathway required for the S-phase DNA damage checkpoint.

Willis N, Rhind N.

Mol Biol Cell. 2009 Feb;20(3):819-33. doi: 10.1091/mbc.E08-08-0798. Epub 2008 Nov 26.

42.

The Hsk1(Cdc7) replication kinase regulates origin efficiency.

Patel PK, Kommajosyula N, Rosebrock A, Bensimon A, Leatherwood J, Bechhoefer J, Rhind N.

Mol Biol Cell. 2008 Dec;19(12):5550-8. doi: 10.1091/mbc.E08-06-0645. Epub 2008 Sep 17.

43.

An intrinsic checkpoint model for regulation of replication origins.

Rhind N.

Cell Cycle. 2008 Sep 1;7(17):2619-20. Epub 2008 Sep 16.

44.

The DNA replication checkpoint directly regulates MBF-dependent G1/S transcription.

Dutta C, Patel PK, Rosebrock A, Oliva A, Leatherwood J, Rhind N.

Mol Cell Biol. 2008 Oct;28(19):5977-85. doi: 10.1128/MCB.00596-08. Epub 2008 Jul 28.

45.

Just-in-time DNA replication.

Jun S, Rhind N.

Physics (College Park Md). 2008;1. pii: 32. Epub 2008 Oct 27. No abstract available.

46.
47.

Cdc2 tyrosine phosphorylation is not required for the S-phase DNA damage checkpoint in fission yeast.

Kommajosyula N, Rhind N.

Cell Cycle. 2006 Nov 1;5(21):2495-500. Epub 2006 Sep 19.

48.

Basic methods for fission yeast.

Forsburg SL, Rhind N.

Yeast. 2006 Feb;23(3):173-83. Review.

49.

DNA replication origins fire stochastically in fission yeast.

Patel PK, Arcangioli B, Baker SP, Bensimon A, Rhind N.

Mol Biol Cell. 2006 Jan;17(1):308-16. Epub 2005 Oct 26.

50.

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