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Items: 1 to 50 of 1353

1.

CosMIC: A Consistent Metric for Spike Inference from Calcium Imaging.

Reynolds S, Abrahamsson T, Sjöström PJ, Schultz SR, Dragotti PL.

Neural Comput. 2018 Jul 18:1-31. doi: 10.1162/neco_a_01114. [Epub ahead of print]

PMID:
30021084
2.

Prevention of Nosocomial Infections in Critically Ill Patients With Lactoferrin: A Randomized, Double-Blind, Placebo-Controlled Study.

Muscedere J, Maslove DM, Boyd JG, O'Callaghan N, Sibley S, Reynolds S, Albert M, Hall R, Jiang X, Day AG, Jones G, Lamontagne F.

Crit Care Med. 2018 Jun 28. doi: 10.1097/CCM.0000000000003294. [Epub ahead of print]

PMID:
30015668
3.

Recurrent tumor-specific regulation of alternative polyadenylation of cancer-related genes.

Xue Z, Warren RL, Gibb EA, MacMillan D, Wong J, Chiu R, Hammond SA, Yang C, Nip KM, Ennis CA, Hahn A, Reynolds S, Birol I.

BMC Genomics. 2018 Jul 13;19(1):536. doi: 10.1186/s12864-018-4903-7.

4.

Opportunistic diseases diminish the clinical benefit of immediate antiretroviral therapy in HIV-tuberculosis co-infected adults with low CD4+ counts.

Worodria W, Ssempijja V, Hanrahan C, Ssegonja R, Muhofwa A, Mazapkwe D, Mayanja-Kizza H, Reynolds SJ, Colebunders R, Manabe YC.

AIDS. 2018 Jul 12. doi: 10.1097/QAD.0000000000001941. [Epub ahead of print]

PMID:
30005014
5.

Quantitation of the latent HIV-1 reservoir from the sequence diversity in viral outgrowth assays.

Poon AFY, Prodger JL, Lynch BA, Lai J, Reynolds SJ, Kasule J, Capoferri AA, Lamers SL, Rodriguez CW, Bruno D, Porcella SF, Martens C, Quinn TC, Redd AD.

Retrovirology. 2018 Jul 5;15(1):47. doi: 10.1186/s12977-018-0426-1.

6.

Implementation Strategies to Improve Evidence-Based Bathing Practices in a Neuro ICU.

Reynolds SS, Sova C, McNalty B, Lambert S, Granger B.

J Nurs Care Qual. 2018 Jul 2. doi: 10.1097/NCQ.0000000000000347. [Epub ahead of print]

PMID:
29975217
7.

A cross-sectional study of asymptomatic Plasmodium falciparum infection burden and risk factors in general population children in 12 villages in northern Uganda.

Maziarz M, Nabalende H, Otim I, Legason ID, Kinyera T, Ogwang MD, Talisuna AO, Reynolds SJ, Kerchan P, Bhatia K, Biggar RJ, Goedert JJ, Pfeiffer RM, Mbulaiteye SM.

Malar J. 2018 Jun 20;17(1):240. doi: 10.1186/s12936-018-2379-1.

8.

Exposure to household air pollution from biomass-burning cookstoves and HbA1c and diabetic status among Honduran women.

Rajkumar S, Clark ML, Young BN, Benka-Coker ML, Bachand AM, Brook RD, Nelson TL, Volckens J, Reynolds SJ, L'Orange C, Good N, Koehler K, Africano S, Osorto Pinel AB, Peel JL.

Indoor Air. 2018 Jun 13. doi: 10.1111/ina.12484. [Epub ahead of print]

PMID:
29896912
9.

Ultrafast perturbation maps as a quantitative tool for testing of multi-port photonic devices.

Vynck K, Dinsdale NJ, Chen B, Bruck R, Khokhar AZ, Reynolds SA, Crudgington L, Thomson DJ, Reed GT, Lalanne P, Muskens OL.

Nat Commun. 2018 Jun 8;9(1):2246. doi: 10.1038/s41467-018-04662-2.

10.

Frequency of EBV LMP-1 Promoter and Coding Variations in Burkitt Lymphoma Samples in Africa and South America and Peripheral Blood in Uganda.

Liao HM, Liu H, Lei H, Li B, Chin PJ, Tsai S, Bhatia K, Gutierrez M, Epelman S, Biggar RJ, Nkrumah F, Neequaye J, Ogwang MD, Reynolds SJ, Lo SC, Mbulaiteye SM.

Cancers (Basel). 2018 Jun 2;10(6). pii: E177. doi: 10.3390/cancers10060177.

11.

Erratum to "Plasma magnesium is inversely associated with Epstein-Barr virus load in peripheral blood and Burkitt lymphoma in Uganda" [Cancer Epidemiol. 52 (2018) 70-74].

Ravell J, Otim I, Nabalende H, Legason ID, Reynolds SJ, Ogwang MD, Ndugwa CM, Marshall V, Whitby D, Goedert JJ, Engels EA, Bhatia K, Lenardo MJ, Mbulaiteye SM.

Cancer Epidemiol. 2018 Jun 1. pii: S1877-7821(18)30221-2. doi: 10.1016/j.canep.2018.05.010. [Epub ahead of print] No abstract available.

PMID:
29861403
12.

The combined influence of cognitions in adolescent depression: Biases of interpretation, self-evaluation, and memory.

Orchard F, Reynolds S.

Br J Clin Psychol. 2018 May 25. doi: 10.1111/bjc.12184. [Epub ahead of print]

PMID:
29799126
13.

Phylogenetic relationships, stage-specific expression and localisation of a unique family of inactive cysteine proteases in Sarcoptes scabiei.

Fernando DD, Reynolds SL, Zakrzewski M, Mofiz E, Papenfuss AT, Holt D, Fischer K.

Parasit Vectors. 2018 May 16;11(1):301. doi: 10.1186/s13071-018-2862-0.

14.

Footprints preserve terminal Pleistocene hunt? Human-sloth interactions in North America.

Bustos D, Jakeway J, Urban TM, Holliday VT, Fenerty B, Raichlen DA, Budka M, Reynolds SC, Allen BD, Love DW, Santucci VL, Odess D, Willey P, McDonald HG, Bennett MR.

Sci Adv. 2018 Apr 25;4(4):eaar7621. doi: 10.1126/sciadv.aar7621. eCollection 2018 Apr.

15.

A Pilot Study on an Interprofessional Course Involving Pharmacy and Dental Students in a Dental Clinic.

Pogge EK, Hunt RJ, Patton LR, Reynolds SC, Davis LE, Storjohann TD, Tennant SE, Call SR.

Am J Pharm Educ. 2018 Apr;82(3):6361. doi: 10.5688/ajpe6361.

16.

Sulfamethoxazole Levels in HIV-Exposed Uninfected Ugandan Children.

Kasule J, Gabriel EE, Anok A, Neal J, Eastman RT, Penzak S, Newell K, Serwadda D, Duffy PE, Reynolds SJ, Hobbs CV.

Am J Trop Med Hyg. 2018 Jun;98(6):1718-1721. doi: 10.4269/ajtmh.17-0933. Epub 2018 Apr 19.

PMID:
29692311
17.

Patterns of Orofacial Clefting in New York City From 1983 to 2010: Trends by Racial Background, Birthplace, and Public Health Strategies.

Butts SC, Reynolds S, Gitman L, Patel P, Joseph M.

Cleft Palate Craniofac J. 2018 Jan 1:1055665618770192. doi: 10.1177/1055665618770192. [Epub ahead of print]

PMID:
29665339
18.

Real-time simulation: first-hand experience of the challenges of community nursing for students.

Reynolds S, Cooper-Stanton G, Potter A.

Br J Community Nurs. 2018 Apr 2;23(4):180-183. doi: 10.12968/bjcn.2018.23.4.180.

PMID:
29633874
19.

The Immune Landscape of Cancer.

Thorsson V, Gibbs DL, Brown SD, Wolf D, Bortone DS, Ou Yang TH, Porta-Pardo E, Gao GF, Plaisier CL, Eddy JA, Ziv E, Culhane AC, Paull EO, Sivakumar IKA, Gentles AJ, Malhotra R, Farshidfar F, Colaprico A, Parker JS, Mose LE, Vo NS, Liu J, Liu Y, Rader J, Dhankani V, Reynolds SM, Bowlby R, Califano A, Cherniack AD, Anastassiou D, Bedognetti D, Rao A, Chen K, Krasnitz A, Hu H, Malta TM, Noushmehr H, Pedamallu CS, Bullman S, Ojesina AI, Lamb A, Zhou W, Shen H, Choueiri TK, Weinstein JN, Guinney J, Saltz J, Holt RA, Rabkin CE; Cancer Genome Atlas Research Network, Lazar AJ, Serody JS, Demicco EG, Disis ML, Vincent BG, Shmulevich L.

Immunity. 2018 Apr 17;48(4):812-830.e14. doi: 10.1016/j.immuni.2018.03.023. Epub 2018 Apr 5.

20.

Pathogenic Germline Variants in 10,389 Adult Cancers.

Huang KL, Mashl RJ, Wu Y, Ritter DI, Wang J, Oh C, Paczkowska M, Reynolds S, Wyczalkowski MA, Oak N, Scott AD, Krassowski M, Cherniack AD, Houlahan KE, Jayasinghe R, Wang LB, Zhou DC, Liu D, Cao S, Kim YW, Koire A, McMichael JF, Hucthagowder V, Kim TB, Hahn A, Wang C, McLellan MD, Al-Mulla F, Johnson KJ; Cancer Genome Atlas Research Network, Lichtarge O, Boutros PC, Raphael B, Lazar AJ, Zhang W, Wendl MC, Govindan R, Jain S, Wheeler D, Kulkarni S, Dipersio JF, Reimand J, Meric-Bernstam F, Chen K, Shmulevich I, Plon SE, Chen F, Ding L.

Cell. 2018 Apr 5;173(2):355-370.e14. doi: 10.1016/j.cell.2018.03.039.

21.

Pediatric Thoracic Trauma: Recognition and Management.

Reynolds SL.

Emerg Med Clin North Am. 2018 May;36(2):473-483. doi: 10.1016/j.emc.2017.12.013. Epub 2018 Feb 10. Review.

PMID:
29622335
22.

Systematic Analysis of Splice-Site-Creating Mutations in Cancer.

Jayasinghe RG, Cao S, Gao Q, Wendl MC, Vo NS, Reynolds SM, Zhao Y, Climente-González H, Chai S, Wang F, Varghese R, Huang M, Liang WW, Wyczalkowski MA, Sengupta S, Li Z, Payne SH, Fenyö D, Miner JH, Walter MJ; Cancer Genome Atlas Research Network, Vincent B, Eyras E, Chen K, Shmulevich I, Chen F, Ding L.

Cell Rep. 2018 Apr 3;23(1):270-281.e3. doi: 10.1016/j.celrep.2018.03.052.

23.

Driver Fusions and Their Implications in the Development and Treatment of Human Cancers.

Gao Q, Liang WW, Foltz SM, Mutharasu G, Jayasinghe RG, Cao S, Liao WW, Reynolds SM, Wyczalkowski MA, Yao L, Yu L, Sun SQ; Fusion Analysis Working Group; Cancer Genome Atlas Research Network, Chen K, Lazar AJ, Fields RC, Wendl MC, Van Tine BA, Vij R, Chen F, Nykter M, Shmulevich I, Ding L.

Cell Rep. 2018 Apr 3;23(1):227-238.e3. doi: 10.1016/j.celrep.2018.03.050.

24.

The effects of repeated Toll-like receptors 2 and 4 stimulation in COPD alveolar macrophages.

Lea SR, Reynolds SL, Kaur M, Simpson KD, Hall SR, Hessel EM, Singh D.

Int J Chron Obstruct Pulmon Dis. 2018 Mar 2;13:771-780. doi: 10.2147/COPD.S97071. eCollection 2018.

25.

HIV testing in a South African Emergency Department: A missed opportunity.

Hansoti B, Stead D, Parrish A, Reynolds SJ, Redd AD, Whalen MM, Mvandaba N, Quinn TC.

PLoS One. 2018 Mar 13;13(3):e0193858. doi: 10.1371/journal.pone.0193858. eCollection 2018.

26.

Bilateral Cochlear Implantation Versus Bimodal Hearing in Patients With Functional Residual Hearing: A Within-subjects Comparison of Audiologic Performance and Quality of Life.

Yawn RJ, O'Connell BP, Dwyer RT, Sunderhaus LW, Reynolds S, Haynes DS, Gifford RH.

Otol Neurotol. 2018 Apr;39(4):422-427. doi: 10.1097/MAO.0000000000001750.

PMID:
29533331
27.

Migration and risk of HIV acquisition in Rakai, Uganda: a population-based cohort study.

Olawore O, Tobian AAR, Kagaayi J, Bazaale JM, Nantume B, Kigozi G, Nankinga J, Nalugoda F, Nakigozi G, Kigozi G, Gray RH, Wawer MJ, Ssekubugu R, Santelli JS, Reynolds SJ, Chang LW, Serwadda D, Grabowski MK.

Lancet HIV. 2018 Apr;5(4):e181-e189. doi: 10.1016/S2352-3018(18)30009-2. Epub 2018 Feb 25.

PMID:
29490875
28.

7 versus 14 days of antibiotic treatment for critically ill patients with bloodstream infection: a pilot randomized clinical trial.

Daneman N, Rishu AH, Pinto R, Aslanian P, Bagshaw SM, Carignan A, Charbonney E, Coburn B, Cook DJ, Detsky ME, Dodek P, Hall R, Kumar A, Lamontagne F, Lauzier F, Marshall JC, Martin CM, McIntyre L, Muscedere J, Reynolds S, Sligl W, Stelfox HT, Wilcox ME, Fowler RA; Canadian Critical Care Trials Group.

Trials. 2018 Feb 17;19(1):111. doi: 10.1186/s13063-018-2474-1.

29.

Current Profile of Adults Presenting for Preoperative Cochlear Implant Evaluation.

Holder JT, Reynolds SM, Sunderhaus LW, Gifford RH.

Trends Hear. 2018 Jan-Dec;22:2331216518755288. doi: 10.1177/2331216518755288.

30.

Archaeology and ichnology at Gombore II-2, Melka Kunture, Ethiopia: everyday life of a mixed-age hominin group 700,000 years ago.

Altamura F, Bennett MR, D'Août K, Gaudzinski-Windheuser S, Melis RT, Reynolds SC, Mussi M.

Sci Rep. 2018 Feb 12;8(1):2815. doi: 10.1038/s41598-018-21158-7.

31.

Correction to: A multiplex marker set for microsatellite typing and sexing of sooty terns Onychoprion fuscatus.

Garrett LJH, Dawson DA, Horsburgh GJ, Reynolds SJ.

BMC Res Notes. 2018 Jan 31;11(1):86. doi: 10.1186/s13104-018-3184-1.

32.

HIV viral suppression and geospatial patterns of HIV antiretroviral therapy treatment facility use in Rakai, Uganda.

Billioux VG, Grabowski MK, Ssekasanvu J, Reynolds SJ, Berman A, Bazaale J, Patel EU, Bugos E, Ndyanabo A, Kisakye A, Kagaayi J, Gray RH, Nakigozi G, Ssekubugu R, Nalugoda F, Serwadda D, Wawer MJ, Chang LW.

AIDS. 2018 Mar 27;32(6):819-824. doi: 10.1097/QAD.0000000000001761.

PMID:
29369167
33.

Elevated inflammatory cytokines in aqueous cytokine profile in HIV-1 infected patients with cataracts in Uganda.

Otiti-Sengeri J, Colebunders R, Reynolds SJ, Muwonge M, Nakigozi G, Kiggundu V, Nalugoda F, Nakanjako D.

BMC Ophthalmol. 2018 Jan 19;18(1):12. doi: 10.1186/s12886-018-0680-y.

34.

Mothers' labor market choices and child development outcomes in Chile.

Reynolds SA, Fernald LCH, Behrman JR.

SSM Popul Health. 2017 Sep 18;3:756-766. doi: 10.1016/j.ssmph.2017.08.010. eCollection 2017 Dec.

35.

Stat-tracks and mediotypes: powerful tools for modern ichnology based on 3D models.

Belvedere M, Bennett MR, Marty D, Budka M, Reynolds SC, Bakirov R.

PeerJ. 2018 Jan 11;6:e4247. doi: 10.7717/peerj.4247. eCollection 2018.

36.

Disparities in children's vocabulary and height in relation to household wealth and parental schooling: A longitudinal study in four low- and middle-income countries.

Reynolds SA, Andersen C, Behrman J, Singh A, Stein AD, Benny L, Crookston BT, Cueto S, Dearden K, Georgiadis A, Krutikova S, Fernald LCH.

SSM Popul Health. 2017 Dec;3:767-786. doi: 10.1016/j.ssmph.2017.08.008.

37.

The monoamine-oxidase B inhibitor deprenyl increases selection of high-effort activity in rats tested on a progressive ratio/chow feeding choice procedure: Implications for treating motivational dysfunctions.

Yohn SE, Reynolds S, Tripodi G, Correa M, Salamone JD.

Behav Brain Res. 2018 Apr 16;342:27-34. doi: 10.1016/j.bbr.2017.12.039. Epub 2017 Dec 29.

PMID:
29292157
38.

Associations between Escherichia coli O157 shedding and the faecal microbiota of dairy cows.

Stenkamp-Strahm C, McConnel C, Magzamen S, Abdo Z, Reynolds S.

J Appl Microbiol. 2018 Mar;124(3):881-898. doi: 10.1111/jam.13679. Epub 2018 Feb 8.

PMID:
29280543
39.

Hybrid Photon-Plasmon Coupling and Ultrafast Control of Nanoantennas on a Silicon Photonic Chip.

Chen B, Bruck R, Traviss D, Khokhar AZ, Reynolds S, Thomson DJ, Mashanovich GZ, Reed GT, Muskens OL.

Nano Lett. 2018 Jan 10;18(1):610-617. doi: 10.1021/acs.nanolett.7b04861. Epub 2017 Dec 29.

PMID:
29272140
40.

A multiplex marker set for microsatellite typing and sexing of sooty terns Onychoprion fuscatus.

Garrett LJH, Dawson DA, Horsburgh GJ, Reynolds SJ.

BMC Res Notes. 2017 Dec 20;10(1):756. doi: 10.1186/s13104-017-3084-9. Erratum in: BMC Res Notes. 2018 Jan 31;11(1):86.

41.

Mapping genetic variations to three-dimensional protein structures to enhance variant interpretation: a proposed framework.

Glusman G, Rose PW, Prlić A, Dougherty J, Duarte JM, Hoffman AS, Barton GJ, Bendixen E, Bergquist T, Bock C, Brunk E, Buljan M, Burley SK, Cai B, Carter H, Gao J, Godzik A, Heuer M, Hicks M, Hrabe T, Karchin R, Leman JK, Lane L, Masica DL, Mooney SD, Moult J, Omenn GS, Pearl F, Pejaver V, Reynolds SM, Rokem A, Schwede T, Song S, Tilgner H, Valasatava Y, Zhang Y, Deutsch EW.

Genome Med. 2017 Dec 18;9(1):113. doi: 10.1186/s13073-017-0509-y.

42.

Plasma magnesium is inversely associated with Epstein-Barr virus load in peripheral blood and Burkitt lymphoma in Uganda.

Juan R, Otim I, Nabalende H, Legason ID, Reynolds SJ, Ogwang MD, Ndugwa CM, Marshall V, Whitby D, Goedert JJ, Engels EA, Bhatia K, Lenardo MJ, Mbulaiteye SM.

Cancer Epidemiol. 2018 Feb;52:70-74. doi: 10.1016/j.canep.2017.12.004. Epub 2017 Dec 14. Erratum in: Cancer Epidemiol. 2018 Jun 1;:.

PMID:
29248801
43.

The validity of self-reported antiretroviral use in persons living with HIV: a population-based study.

Grabowski MK, Reynolds SJ, Kagaayi J, Gray RH, Clarke W, Chang LW, Nakigozi G, Laeyndecker O, Redd AD, Billioux V, Ssekubugu R, Nalugoda F, Wawer MJ, Serwadda D, Quinn TC, Tobian AAR.

AIDS. 2018 Jan 28;32(3):363-369. doi: 10.1097/QAD.0000000000001706.

PMID:
29194115
44.

How issues of autonomy and consent differ between children and adults: Kids are not just little people.

Reynolds S, Grant-Kels JM, Bercovitch L.

Clin Dermatol. 2017 Nov - Dec;35(6):601-605. doi: 10.1016/j.clindermatol.2017.08.010. Epub 2017 Aug 3. Review.

PMID:
29191351
45.

Hepatitis E Virus Seroprevalence and Correlates of Anti-HEV IgG Antibodies in the Rakai District, Uganda.

Boon D, Redd AD, Laeyendecker O, Engle RE, Nguyen H, Ocama P, Boaz I, Ndyanabo A, Kiggundu V, Reynolds SJ, Gray RH, Wawer MJ, Purcell RH, Kirk GD, Quinn TC, Stabinski L; Rakai Health Sciences Program.

J Infect Dis. 2018 Feb 14;217(5):785-789. doi: 10.1093/infdis/jix610.

PMID:
29186448
46.

HIV Prevention Efforts and Incidence of HIV in Uganda.

Grabowski MK, Serwadda DM, Gray RH, Nakigozi G, Kigozi G, Kagaayi J, Ssekubugu R, Nalugoda F, Lessler J, Lutalo T, Galiwango RM, Makumbi F, Kong X, Kabatesi D, Alamo ST, Wiersma S, Sewankambo NK, Tobian AAR, Laeyendecker O, Quinn TC, Reynolds SJ, Wawer MJ, Chang LW; Rakai Health Sciences Program.

N Engl J Med. 2017 Nov 30;377(22):2154-2166. doi: 10.1056/NEJMoa1702150.

47.

Personal exposure of dairy workers to dust, endotoxin, muramic acid, ergosterol, and ammonia on large-scale dairies in the high plains Western United States.

Davidson ME, Schaeffer J, Clark ML, Magzamen S, Brooks EJ, Keefe TJ, Bradford M, Roman-Muniz N, Mehaffy J, Dooley G, Poole JA, Mitloehner FM, Reed S, Schenker MB, Reynolds SJ.

J Occup Environ Hyg. 2018 Mar;15(3):182-193. doi: 10.1080/15459624.2017.1403610.

PMID:
29157144
48.

Multiphoton minimal inertia scanning for fast acquisition of neural activity signals.

Schuck R, Go MA, Garasto S, Reynolds S, Dragotti PL, Schultz SR.

J Neural Eng. 2018 Apr;15(2):025003. doi: 10.1088/1741-2552/aa99e2.

49.

A systematic review of emergency department based HIV testing and linkage to care initiatives in low resource settings.

Hansoti B, Kelen GD, Quinn TC, Whalen MM, DesRosiers TT, Reynolds SJ, Redd A, Rothman RE.

PLoS One. 2017 Nov 2;12(11):e0187443. doi: 10.1371/journal.pone.0187443. eCollection 2017. Review.

50.

The ISB Cancer Genomics Cloud: A Flexible Cloud-Based Platform for Cancer Genomics Research.

Reynolds SM, Miller M, Lee P, Leinonen K, Paquette SM, Rodebaugh Z, Hahn A, Gibbs DL, Slagel J, Longabaugh WJ, Dhankani V, Reyes M, Pihl T, Backus M, Bookman M, Deflaux N, Bingham J, Pot D, Shmulevich I.

Cancer Res. 2017 Nov 1;77(21):e7-e10. doi: 10.1158/0008-5472.CAN-17-0617.

PMID:
29092928

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