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Items: 1 to 50 of 219

1.

Poverty and Community-Acquired Antimicrobial Resistance with Extended-Spectrum β-Lactamase-Producing Organisms, Hyderabad, India.

Alsan M, Kammili N, Lakshmi J, Xing A, Khan A, Rani M, Kolli P, Relman DA, Owens DK.

Emerg Infect Dis. 2018 Aug;24(8):1490-1496. doi: 10.3201/eid2408.171030.

2.

Early transcriptional responses after dengue vaccination mirror the response to natural infection and predict neutralizing antibody titers.

Popper SJ, Strouts FR, Lindow JC, Cheng HK, Montoya M, Balmaseda A, Durbin AP, Whitehead SS, Harris E, Kirkpatrick BD, Relman DA.

J Infect Dis. 2018 Jul 14. doi: 10.1093/infdis/jiy434. [Epub ahead of print]

PMID:
30010906
3.

A spatial gradient of bacterial diversity in the human oral cavity shaped by salivary flow.

Proctor DM, Fukuyama JA, Loomer PM, Armitage GC, Lee SA, Davis NM, Ryder MI, Holmes SP, Relman DA.

Nat Commun. 2018 Feb 14;9(1):681. doi: 10.1038/s41467-018-02900-1.

4.

Publisher Correction: Enterotypes in the landscape of gut microbial community composition.

Costea PI, Hildebrand F, Arumugam M, Bäckhed F, Blaser MJ, Bushman FD, de Vos WM, Ehrlich SD, Fraser CM, Hattori M, Huttenhower C, Jeffery IB, Knights D, Lewis JD, Ley RE, Ochman H, O'Toole PW, Quince C, Relman DA, Shanahan F, Sunagawa S, Wang J, Weinstock GM, Wu GD, Zeller G, Zhao L, Raes J, Knight R, Bork P.

Nat Microbiol. 2018 Mar;3(3):388. doi: 10.1038/s41564-018-0114-x.

PMID:
29440750
5.

Role of priority effects in the early-life assembly of the gut microbiota.

Sprockett D, Fukami T, Relman DA.

Nat Rev Gastroenterol Hepatol. 2018 Apr;15(4):197-205. doi: 10.1038/nrgastro.2017.173. Epub 2018 Jan 24. Review.

PMID:
29362469
6.

Enterotypes in the landscape of gut microbial community composition.

Costea PI, Hildebrand F, Arumugam M, Bäckhed F, Blaser MJ, Bushman FD, de Vos WM, Ehrlich SD, Fraser CM, Hattori M, Huttenhower C, Jeffery IB, Knights D, Lewis JD, Ley RE, Ochman H, O'Toole PW, Quince C, Relman DA, Shanahan F, Sunagawa S, Wang J, Weinstock GM, Wu GD, Zeller G, Zhao L, Raes J, Knight R, Bork P.

Nat Microbiol. 2018 Jan;3(1):8-16. doi: 10.1038/s41564-017-0072-8. Epub 2017 Dec 18. Review. Erratum in: Nat Microbiol. 2018 Feb 13;:.

7.

Risky Business: Meeting the Structural Needs of Transdisciplinary Science.

Wise PH, Shaw GM, Druzin ML, Darmstadt GL, Quaintance C, Mäkinen E, Relman DA, Quake SR, Butte AJ, Angst MS, Muglia LJ, Macones G, Driscoll D, Ober C, Simpson JL, Katz M, Howse J, Stevenson DK.

J Pediatr. 2017 Dec;191:255-258. doi: 10.1016/j.jpeds.2017.08.072. No abstract available.

PMID:
29173314
8.

Novel Microbial Diversity and Functional Potential in the Marine Mammal Oral Microbiome.

Dudek NK, Sun CL, Burstein D, Kantor RS, Aliaga Goltsman DS, Bik EM, Thomas BC, Banfield JF, Relman DA.

Curr Biol. 2017 Dec 18;27(24):3752-3762.e6. doi: 10.1016/j.cub.2017.10.040. Epub 2017 Nov 16.

PMID:
29153320
9.

Microbiota: A high-pressure situation for bacteria.

Relman DA.

Nature. 2017 Nov 30;551(7682):571-572. doi: 10.1038/nature24760. Epub 2017 Nov 15. No abstract available.

PMID:
29143820
10.

Childhood tuberculosis is associated with decreased abundance of T cell gene transcripts and impaired T cell function.

Hemingway C, Berk M, Anderson ST, Wright VJ, Hamilton S, Eleftherohorinou H, Kaforou M, Goldgof GM, Hickman K, Kampmann B, Schoeman J, Eley B, Beatty D, Pienaar S, Nicol MP, Griffiths MJ, Waddell SJ, Newton SM, Coin LJ, Relman DA, Montana G, Levin M.

PLoS One. 2017 Nov 15;12(11):e0185973. doi: 10.1371/journal.pone.0185973. eCollection 2017.

11.

Clostridium difficile, Aging, and the Gut: Can Microbiome Rejuvenation Keep Us Young and Healthy?

Fischer N, Relman DA.

J Infect Dis. 2018 Jan 4;217(2):174-176. doi: 10.1093/infdis/jix417. No abstract available.

PMID:
28968708
12.

Correction: Cathelicidin Insufficiency in Patients with Fatal Leptospirosis.

Lindow JC, Wunder EA Jr, Popper SJ, Min JN, Mannam P, Srivastava A, Yao Y, Hacker KP, Raddassi K, Lee PJ, Montgomery RR, Shaw AC, Hagan JE, Araújo GC, Nery N Jr, Relman DA, Kim CC, Reis MG, Ko AI.

PLoS Pathog. 2017 Sep 26;13(9):e1006646. doi: 10.1371/journal.ppat.1006646. eCollection 2017 Sep.

13.

Replication and refinement of a vaginal microbial signature of preterm birth in two racially distinct cohorts of US women.

Callahan BJ, DiGiulio DB, Goltsman DSA, Sun CL, Costello EK, Jeganathan P, Biggio JR, Wong RJ, Druzin ML, Shaw GM, Stevenson DK, Holmes SP, Relman DA.

Proc Natl Acad Sci U S A. 2017 Sep 12;114(37):9966-9971. doi: 10.1073/pnas.1705899114. Epub 2017 Aug 28.

14.

Long-term taxonomic and functional divergence from donor bacterial strains following fecal microbiota transplantation in immunocompromised patients.

Moss EL, Falconer SB, Tkachenko E, Wang M, Systrom H, Mahabamunuge J, Relman DA, Hohmann EL, Bhatt AS.

PLoS One. 2017 Aug 21;12(8):e0182585. doi: 10.1371/journal.pone.0182585. eCollection 2017.

15.

Multidomain analyses of a longitudinal human microbiome intestinal cleanout perturbation experiment.

Fukuyama J, Rumker L, Sankaran K, Jeganathan P, Dethlefsen L, Relman DA, Holmes SP.

PLoS Comput Biol. 2017 Aug 18;13(8):e1005706. doi: 10.1371/journal.pcbi.1005706. eCollection 2017 Aug.

16.

On Defining Global Catastrophic Biological Risks.

Palmer MJ, Tiu BC, Weissenbach AS, Relman DA.

Health Secur. 2017 Jul/Aug;15(4):347-348. doi: 10.1089/hs.2017.0057. Epub 2017 Jul 24. No abstract available.

17.

The Human Virome: Implications for Clinical Practice in Transplantation Medicine.

Tan SK, Relman DA, Pinsky BA.

J Clin Microbiol. 2017 Oct;55(10):2884-2893. doi: 10.1128/JCM.00489-17. Epub 2017 Jul 19. Review.

18.

Candidatus Mycoplasma girerdii replicates, diversifies, and co-occurs with Trichomonas vaginalis in the oral cavity of a premature infant.

Costello EK, Sun CL, Carlisle EM, Morowitz MJ, Banfield JF, Relman DA.

Sci Rep. 2017 Jun 19;7(1):3764. doi: 10.1038/s41598-017-03821-7.

19.

The Landscape Ecology and Microbiota of the Human Nose, Mouth, and Throat.

Proctor DM, Relman DA.

Cell Host Microbe. 2017 Apr 12;21(4):421-432. doi: 10.1016/j.chom.2017.03.011. Review.

20.

A geographically-diverse collection of 418 human gut microbiome pathway genome databases.

Hahn AS, Altman T, Konwar KM, Hanson NW, Kim D, Relman DA, Dill DL, Hallam SJ.

Sci Data. 2017 Apr 11;4:170035. doi: 10.1038/sdata.2017.35.

21.

Cathelicidin Insufficiency in Patients with Fatal Leptospirosis.

Lindow JC, Wunder EA Jr, Popper SJ, Min JN, Mannam P, Srivastava A, Yao Y, Hacker KP, Raddassi K, Lee PJ, Montgomery RR, Shaw AC, Hagan JE, Araújo GC, Nery N Jr, Relman DA, Kim CC, Reis MG, Ko AI.

PLoS Pathog. 2016 Nov 3;12(11):e1005943. doi: 10.1371/journal.ppat.1005943. eCollection 2016 Nov. Erratum in: PLoS Pathog. 2017 Sep 26;13(9):e1006646.

22.

A new view of the tree of life.

Hug LA, Baker BJ, Anantharaman K, Brown CT, Probst AJ, Castelle CJ, Butterfield CN, Hernsdorf AW, Amano Y, Ise K, Suzuki Y, Dudek N, Relman DA, Finstad KM, Amundson R, Thomas BC, Banfield JF.

Nat Microbiol. 2016 Apr 11;1:16048. doi: 10.1038/nmicrobiol.2016.48.

PMID:
27572647
23.

A microbial perspective of human developmental biology.

Charbonneau MR, Blanton LV, DiGiulio DB, Relman DA, Lebrilla CB, Mills DA, Gordon JI.

Nature. 2016 Jul 7;535(7610):48-55. doi: 10.1038/nature18845.

24.

Early Transcriptional Signatures of the Immune Response to a Live Attenuated Tetravalent Dengue Vaccine Candidate in Non-human Primates.

Strouts FR, Popper SJ, Partidos CD, Stinchcomb DT, Osorio JE, Relman DA.

PLoS Negl Trop Dis. 2016 May 23;10(5):e0004731. doi: 10.1371/journal.pntd.0004731. eCollection 2016 May.

25.

Gut microbiota: How to build healthy growth-promoting gut communities.

Relman DA.

Nat Rev Gastroenterol Hepatol. 2016 Jul;13(7):379-80. doi: 10.1038/nrgastro.2016.74. Epub 2016 May 18. No abstract available.

PMID:
27188819
26.

Marine mammals harbor unique microbiotas shaped by and yet distinct from the sea.

Bik EM, Costello EK, Switzer AD, Callahan BJ, Holmes SP, Wells RS, Carlin KP, Jensen ED, Venn-Watson S, Relman DA.

Nat Commun. 2016 Feb 3;7:10516. doi: 10.1038/ncomms10516.

27.
28.

SCIENCE GOVERNANCE. A more systematic approach to biological risk.

Palmer MJ, Fukuyama F, Relman DA.

Science. 2015 Dec 18;350(6267):1471-3. doi: 10.1126/science.aad8849. No abstract available.

PMID:
26680180
29.

Variation in Taxonomic Composition of the Fecal Microbiota in an Inbred Mouse Strain across Individuals and Time.

Hoy YE, Bik EM, Lawley TD, Holmes SP, Monack DM, Theriot JA, Relman DA.

PLoS One. 2015 Nov 13;10(11):e0142825. doi: 10.1371/journal.pone.0142825. eCollection 2015.

30.

Reply to Keelan and Payne: Microbiota-related pathways for preterm birth.

DiGiulio DB, Stevenson DK, Shaw G, Lyell DJ, Relman DA.

Proc Natl Acad Sci U S A. 2015 Nov 24;112(47):E6415. doi: 10.1073/pnas.1517939112. Epub 2015 Oct 29. No abstract available.

31.

Infectious Diseases Society of America and Gain-of-Function Experiments With Pathogens Having Pandemic Potential.

Frank GM, Adalja A, Barbour A, Casadevall A, Dormitzer PR, Duchin J, Hayden FG, Hirsch MS, Hynes NA, Lipsitch M, Pavia AT, Relman DA.

J Infect Dis. 2016 May 1;213(9):1359-61. doi: 10.1093/infdis/jiv474. Epub 2015 Sep 27. No abstract available.

PMID:
26416656
32.

The Human Microbiome and the Future Practice of Medicine.

Relman DA.

JAMA. 2015 Sep 15;314(11):1127-8. doi: 10.1001/jama.2015.10700. No abstract available.

PMID:
26372576
33.

Temporal and spatial variation of the human microbiota during pregnancy.

DiGiulio DB, Callahan BJ, McMurdie PJ, Costello EK, Lyell DJ, Robaczewska A, Sun CL, Goltsman DS, Wong RJ, Shaw G, Stevenson DK, Holmes SP, Relman DA.

Proc Natl Acad Sci U S A. 2015 Sep 1;112(35):11060-5. doi: 10.1073/pnas.1502875112. Epub 2015 Aug 17.

34.

Gain-of-function experiments: time for a real debate.

Duprex WP, Fouchier RA, Imperiale MJ, Lipsitch M, Relman DA.

Nat Rev Microbiol. 2015 Jan;13(1):58-64. doi: 10.1038/nrmicro3405. Epub 2014 Dec 8. Review.

PMID:
25482289
35.

Biological engineering, risk, and uncertainty.

Relman DA.

Hastings Cent Rep. 2014 Nov-Dec;44(6 Spec no.):S36-7. doi: 10.1002/hast.397. No abstract available.

PMID:
25418702
36.

Actionable sequence data on infectious diseases in the clinical workplace.

Relman DA.

Clin Chem. 2015 Jan;61(1):38-40. doi: 10.1373/clinchem.2014.229211. Epub 2014 Nov 14. No abstract available.

37.

Antibiotics and the gut microbiota.

Modi SR, Collins JJ, Relman DA.

J Clin Invest. 2014 Oct;124(10):4212-8. doi: 10.1172/JCI72333. Epub 2014 Oct 1. Review.

38.

Editorial overview: insights into molecular mechanisms of microbiota.

Martens EC, Sonnenburg JL, Relman DA.

J Mol Biol. 2014 Nov 25;426(23):3827-9. doi: 10.1016/j.jmb.2014.08.021. Epub 2014 Sep 11. No abstract available.

PMID:
25218944
39.

Unrest at home: diarrheal disease and microbiota disturbance.

Bik EM, Relman DA.

Genome Biol. 2014 Jun 27;15(6):120. doi: 10.1186/gb4182.

40.

Population health: immaturity in the gut microbial community.

Costello EK, Relman DA.

Nature. 2014 Jun 19;510(7505):344-5. doi: 10.1038/nature13347. Epub 2014 Jun 4. No abstract available.

PMID:
24896185
41.

The importance of influenza vaccination.

Babcock HM, Jernigan JA, Relman DA.

JAMA Intern Med. 2014 Apr;174(4):644-5. doi: 10.1001/jamainternmed.2013.11174. No abstract available.

PMID:
24711193
42.

Redaction of sensitive data in the publication of dual use research of concern.

Casadevall A, Enquist L, Imperiale MJ, Keim P, Osterholm MT, Relman DA.

MBio. 2013 Dec 31;5(1):e00991-13. doi: 10.1128/mBio.00991-13.

43.

Nasal microenvironments and interspecific interactions influence nasal microbiota complexity and S. aureus carriage.

Yan M, Pamp SJ, Fukuyama J, Hwang PH, Cho DY, Holmes S, Relman DA.

Cell Host Microbe. 2013 Dec 11;14(6):631-40. doi: 10.1016/j.chom.2013.11.005.

44.

Microbiome assembly across multiple body sites in low-birthweight infants.

Costello EK, Carlisle EM, Bik EM, Morowitz MJ, Relman DA.

MBio. 2013 Oct 29;4(6):e00782-13. doi: 10.1128/mBio.00782-13.

45.

"Inconvenient truths" in the pursuit of scientific knowledge and public health.

Relman DA.

J Infect Dis. 2014 Jan 15;209(2):170-2. doi: 10.1093/infdis/jit529. Epub 2013 Oct 7. No abstract available.

46.

Genetically dictated change in host mucus carbohydrate landscape exerts a diet-dependent effect on the gut microbiota.

Kashyap PC, Marcobal A, Ursell LK, Smits SA, Sonnenburg ED, Costello EK, Higginbottom SK, Domino SE, Holmes SP, Relman DA, Knight R, Gordon JI, Sonnenburg JL.

Proc Natl Acad Sci U S A. 2013 Oct 15;110(42):17059-64. doi: 10.1073/pnas.1306070110. Epub 2013 Sep 23.

47.

Microbiota's 'little helpers': bacteriophages and antibiotic-associated responses in the gut microbiome.

Sun CL, Relman DA.

Genome Biol. 2013 Jul 30;14(7):127. doi: 10.1186/gb-2013-14-7-127.

48.

Identification of Lactobacillus strains with probiotic features from the bottlenose dolphin (Tursiops truncatus).

Diaz MA, Bik EM, Carlin KP, Venn-Watson SK, Jensen ED, Jones SE, Gaston EP, Relman DA, Versalovic J.

J Appl Microbiol. 2013 Oct;115(4):1037-51. doi: 10.1111/jam.12305. Epub 2013 Aug 1.

49.

Metagenomics, infectious disease diagnostics, and outbreak investigations: sequence first, ask questions later?

Relman DA.

JAMA. 2013 Apr 10;309(14):1531-2. doi: 10.1001/jama.2013.3678. No abstract available.

PMID:
23571595
50.

The increasingly compelling moral responsibilities of life scientists.

Relman DA.

Hastings Cent Rep. 2013 Mar-Apr;43(2):34-5. doi: 10.1002/hast.156. No abstract available.

PMID:
23494700

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