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Human 5' UTR design and variant effect prediction from a massively parallel translation assay.

Sample PJ, Wang B, Reid DW, Presnyak V, McFadyen IJ, Morris DR, Seelig G.

Nat Biotechnol. 2019 Jul;37(7):803-809. doi: 10.1038/s41587-019-0164-5. Epub 2019 Jul 1.


Mutations in the HFE gene can be associated with increased lung disease severity in cystic fibrosis.

Smith DJ, Klein K, Hartel G, Wainwright CE, Bell SC, Anderson GJ, Reid DW.

Gene. 2019 Jan 30;683:12-17. doi: 10.1016/j.gene.2018.10.002. Epub 2018 Oct 3.


Expression of Pseudomonas aeruginosa Antibiotic Resistance Genes Varies Greatly during Infections in Cystic Fibrosis Patients.

Martin LW, Robson CL, Watts AM, Gray AR, Wainwright CE, Bell SC, Ramsay KA, Kidd TJ, Reid DW, Brockway B, Lamont IL.

Antimicrob Agents Chemother. 2018 Oct 24;62(11). pii: e01789-18. doi: 10.1128/AAC.01789-18. Print 2018 Nov.


Anomalies in T Cell Function Are Associated With Individuals at Risk of Mycobacterium abscessus Complex Infection.

Lutzky VP, Ratnatunga CN, Smith DJ, Kupz A, Doolan DL, Reid DW, Thomson RM, Bell SC, Miles JJ.

Front Immunol. 2018 Jun 11;9:1319. doi: 10.3389/fimmu.2018.01319. eCollection 2018.


Efficient zinc uptake is critical for the ability of Pseudomonas aeruginosa to express virulence traits and colonize the human lung.

Mastropasqua MC, Lamont I, Martin LW, Reid DW, D'Orazio M, Battistoni A.

J Trace Elem Med Biol. 2018 Jul;48:74-80. doi: 10.1016/j.jtemb.2018.03.009. Epub 2018 Mar 14.


Oncoprotein AEG-1 is an endoplasmic reticulum RNA-binding protein whose interactome is enriched in organelle resident protein-encoding mRNAs.

Hsu JC, Reid DW, Hoffman AM, Sarkar D, Nicchitta CV.

RNA. 2018 May;24(5):688-703. doi: 10.1261/rna.063313.117. Epub 2018 Feb 7.


Dengue Virus Selectively Annexes Endoplasmic Reticulum-Associated Translation Machinery as a Strategy for Co-opting Host Cell Protein Synthesis.

Reid DW, Campos RK, Child JR, Zheng T, Chan KWK, Bradrick SS, Vasudevan SG, Garcia-Blanco MA, Nicchitta CV.

J Virol. 2018 Mar 14;92(7). pii: e01766-17. doi: 10.1128/JVI.01766-17. Print 2018 Apr 1.


A first step to STOP cystic fibrosis exacerbations.

Burgel PR, Reid DW, Aaron SD.

J Cyst Fibros. 2017 Sep;16(5):529-531. doi: 10.1016/j.jcf.2017.08.006. No abstract available.


Tropical Australia is a potential reservoir of non-tuberculous mycobacteria in cystic fibrosis.

Sherrard LJ, Tay GT, Butler CA, Wood ME, Yerkovich S, Ramsay KA, Reid DW, Moore VL, Kidd TJ, Bell SC.

Eur Respir J. 2017 May 11;49(5). pii: 1700046. doi: 10.1183/13993003.00046-2017. Print 2017 May. No abstract available.


Inhaled corticosteroid normalizes some but not all airway vascular remodeling in COPD.

Soltani A, Walters EH, Reid DW, Shukla SD, Nowrin K, Ward C, Muller HK, Sohal SS.

Int J Chron Obstruct Pulmon Dis. 2016 Sep 22;11:2359-2367. eCollection 2016.


The changing prevalence of pulmonary infection in adults with cystic fibrosis: A longitudinal analysis.

Ramsay KA, Sandhu H, Geake JB, Ballard E, O'Rourke P, Wainwright CE, Reid DW, Kidd TJ, Bell SC.

J Cyst Fibros. 2017 Jan;16(1):70-77. doi: 10.1016/j.jcf.2016.07.010. Epub 2016 Aug 8.


Preliminary feasibility and modelling of a liquid matrix Dictyostelium discoideum virulence assay for Pseudomonas aeruginosa.

Champion AC, Houston NK, Bradbury RS, Reid DW.

Br J Biomed Sci. 2016;73(2):51-5. doi: 10.1080/09674845.2016.1157249. Epub 2016 Apr 28.


Methicillin-resistant Staphylococcus aureus acquisition in healthcare workers with cystic fibrosis: a retrospective cross-sectional study.

Wood ME, Sherrard LJ, Ramsay KA, Yerkovich ST, Reid DW, Kidd TJ, Bell SC.

BMC Pulm Med. 2016 May 11;16(1):78. doi: 10.1186/s12890-016-0243-z.


Complementary Roles of GADD34- and CReP-Containing Eukaryotic Initiation Factor 2α Phosphatases during the Unfolded Protein Response.

Reid DW, Tay AS, Sundaram JR, Lee IC, Chen Q, George SE, Nicchitta CV, Shenolikar S.

Mol Cell Biol. 2016 Jun 15;36(13):1868-80. doi: 10.1128/MCB.00190-16. Print 2016 Jul 1.


Enhancing the Relationship Adjustment of South Asian Canadian Couples Using a Systemic-Constructivist Approach to Couple Therapy.

Ahmad S, Reid DW.

J Marital Fam Ther. 2016 Oct;42(4):615-629. doi: 10.1111/jmft.12161. Epub 2016 Apr 6.


Acute exacerbation of COPD.

Ko FW, Chan KP, Hui DS, Goddard JR, Shaw JG, Reid DW, Yang IA.

Respirology. 2016 Oct;21(7):1152-65. doi: 10.1111/resp.12780. Epub 2016 Mar 30. Review.


Use of inhaled corticosteroids in COPD: improving efficacy.

Yang IA, Shaw JG, Goddard JR, Clarke MS, Reid DW.

Expert Rev Respir Med. 2016;10(3):339-50. doi: 10.1586/17476348.2016.1151789. Review.


Pseudomonas aeruginosa antibiotic resistance in Australian cystic fibrosis centres.

Smith DJ, Ramsay KA, Yerkovich ST, Reid DW, Wainwright CE, Grimwood K, Bell SC, Kidd TJ.

Respirology. 2016 Feb;21(2):329-37. doi: 10.1111/resp.12714. Epub 2015 Dec 28.


An international, multicentre evaluation and description of Burkholderia pseudomallei infection in cystic fibrosis.

Geake JB, Reid DW, Currie BJ, Bell SC; MelioidCF Investigators, Bright-Thomas R, Dewar J, Holden S, Simmonds N, Gyi K, Kenna D, Waters V, Jackson M, O'Sullivan B, Taccetti G, Kolbe J, O'Carroll M, Campbell D, Jaksic M, Radhakrishna N, Kidd TJ, Flight W.

BMC Pulm Med. 2015 Oct 9;15:116. doi: 10.1186/s12890-015-0109-9.


Simple and inexpensive ribosome profiling analysis of mRNA translation.

Reid DW, Shenolikar S, Nicchitta CV.

Methods. 2015 Dec;91:69-74. doi: 10.1016/j.ymeth.2015.07.003. Epub 2015 Jul 8.


LOCAL TRANSLATION. Comment on "Principles of ER cotranslational translocation revealed by proximity-specific ribosome profiling".

Reid DW, Nicchitta CV.

Science. 2015 Jun 12;348(6240):1217. doi: 10.1126/science.aaa7257. Epub 2015 Jun 11.


Inhaled antibiotics in Cystic Fibrosis (CF) and non-CF bronchiectasis.

Tay GT, Reid DW, Bell SC.

Semin Respir Crit Care Med. 2015 Apr;36(2):267-86. doi: 10.1055/s-0035-1547346. Epub 2015 Mar 31. Review.


High peripheral blood th17 percent associated with poor lung function in cystic fibrosis.

Mulcahy EM, Hudson JB, Beggs SA, Reid DW, Roddam LF, Cooley MA.

PLoS One. 2015 Mar 24;10(3):e0120912. doi: 10.1371/journal.pone.0120912. eCollection 2015.


Diversity and selectivity in mRNA translation on the endoplasmic reticulum.

Reid DW, Nicchitta CV.

Nat Rev Mol Cell Biol. 2015 Apr;16(4):221-31. doi: 10.1038/nrm3958. Epub 2015 Mar 4. Review.


Urease production as a marker of virulence in Pseudomonas aeruginosa.

Bradbury RS, Reid DW, Champion AC.

Br J Biomed Sci. 2014;71(4):175-7. No abstract available.


Ivacaftor in severe cystic fibrosis lung disease and a G551D mutation.

Wood ME, Smith DJ, Reid DW, Masel PJ, France MW, Bell SC.

Respirol Case Rep. 2013 Dec;1(2):52-4. doi: 10.1002/rcr2.27. Epub 2013 Oct 10.


A novel ribosomopathy caused by dysfunction of RPL10 disrupts neurodevelopment and causes X-linked microcephaly in humans.

Brooks SS, Wall AL, Golzio C, Reid DW, Kondyles A, Willer JR, Botti C, Nicchitta CV, Katsanis N, Davis EE.

Genetics. 2014 Oct;198(2):723-33. doi: 10.1534/genetics.114.168211.


Reduced mucosal associated invariant T-cells are associated with increased disease severity and Pseudomonas aeruginosa infection in cystic fibrosis.

Smith DJ, Hill GR, Bell SC, Reid DW.

PLoS One. 2014 Oct 8;9(10):e109891. doi: 10.1371/journal.pone.0109891. eCollection 2014.


The unfolded protein response triggers selective mRNA release from the endoplasmic reticulum.

Reid DW, Chen Q, Tay AS, Shenolikar S, Nicchitta CV.

Cell. 2014 Sep 11;158(6):1362-1374. doi: 10.1016/j.cell.2014.08.012.


De novo translation initiation on membrane-bound ribosomes as a mechanism for localization of cytosolic protein mRNAs to the endoplasmic reticulum.

Jagannathan S, Reid DW, Cox AH, Nicchitta CV.

RNA. 2014 Oct;20(10):1489-98. doi: 10.1261/rna.045526.114. Epub 2014 Aug 20.


Multifunctional roles for the protein translocation machinery in RNA anchoring to the endoplasmic reticulum.

Jagannathan S, Hsu JC, Reid DW, Chen Q, Thompson WJ, Moseley AM, Nicchitta CV.

J Biol Chem. 2014 Sep 12;289(37):25907-24. doi: 10.1074/jbc.M114.580688. Epub 2014 Jul 25.


Pyrosequencing reveals transient cystic fibrosis lung microbiome changes with intravenous antibiotics.

Smith DJ, Badrick AC, Zakrzewski M, Krause L, Bell SC, Anderson GJ, Reid DW.

Eur Respir J. 2014 Oct;44(4):922-30. doi: 10.1183/09031936.00203013. Epub 2014 Jul 17.


Elevated metal concentrations in the CF airway correlate with cellular injury and disease severity.

Smith DJ, Anderson GJ, Bell SC, Reid DW.

J Cyst Fibros. 2014 May;13(3):289-95. doi: 10.1016/j.jcf.2013.12.001. Epub 2013 Dec 24.


Molecular analysis of changes in Pseudomonas aeruginosa load during treatment of a pulmonary exacerbation in cystic fibrosis.

Reid DW, Latham R, Lamont IL, Camara M, Roddam LF.

J Cyst Fibros. 2013 Dec;12(6):688-99. doi: 10.1016/j.jcf.2013.03.008. Epub 2013 May 22.


Pseudomonas aeruginosa uses multiple pathways to acquire iron during chronic infection in cystic fibrosis lungs.

Konings AF, Martin LW, Sharples KJ, Roddam LF, Latham R, Reid DW, Lamont IL.

Infect Immun. 2013 Aug;81(8):2697-704. doi: 10.1128/IAI.00418-13. Epub 2013 May 20.


ICU outcomes in cystic fibrosis following invasive ventilation.

Reid DW, Bell SC.

Respirology. 2013 May;18(4):585-6. doi: 10.1111/resp.12077. No abstract available.


Supporting cystic fibrosis with ICT.

Roehrer E, Cummings E, Turner P, Hauser J, Cameron-Tucker H, Beggs SA, Micallef NA, Wainwright C, Cheney J, Jessup M, Saddington H, Ellis L, Walters H, Reid DW.

Stud Health Technol Inform. 2013;183:137-41.


Sputum neutrophils in cystic fibrosis patients display a reduced respiratory burst.

Houston N, Stewart N, Smith DS, Bell SC, Champion AC, Reid DW.

J Cyst Fibros. 2013 Jul;12(4):352-62. doi: 10.1016/j.jcf.2012.11.004. Epub 2012 Dec 23.


Premature translational termination products are rapidly degraded substrates for MHC class I presentation.

Lacsina JR, Marks OA, Liu X, Reid DW, Jagannathan S, Nicchitta CV.

PLoS One. 2012;7(12):e51968. doi: 10.1371/journal.pone.0051968. Epub 2012 Dec 14.


Targeting iron uptake to control Pseudomonas aeruginosa infections in cystic fibrosis.

Smith DJ, Lamont IL, Anderson GJ, Reid DW.

Eur Respir J. 2013 Dec;42(6):1723-36. doi: 10.1183/09031936.00124012. Epub 2012 Nov 8. Review.


Accurate assessment of systemic iron status in cystic fibrosis will avoid the hazards of inappropriate iron supplementation.

Smith DJ, Anderson GJ, Lamont IL, Masel P, Bell SC, Reid DW.

J Cyst Fibros. 2013 May;12(3):303-4. doi: 10.1016/j.jcf.2012.10.001. Epub 2012 Oct 22. No abstract available.


Identification of genetic modifiers of CagA-induced epithelial disruption in Drosophila.

Reid DW, Muyskens JB, Neal JT, Gaddini GW, Cho LY, Wandler AM, Botham CM, Guillemin K.

Front Cell Infect Microbiol. 2012 Mar 13;2:24. doi: 10.3389/fcimb.2012.00024. eCollection 2012.


Cigarette smoke and platelet-activating factor receptor dependent adhesion of Streptococcus pneumoniae to lower airway cells.

Grigg J, Walters H, Sohal SS, Wood-Baker R, Reid DW, Xu CB, Edvinsson L, Morissette MC, Stämpfli MR, Kirwan M, Koh L, Suri R, Mushtaq N.

Thorax. 2012 Oct;67(10):908-13. doi: 10.1136/thoraxjnl-2011-200835. Epub 2012 May 1.


The enduring enigma of nuclear translation.

Reid DW, Nicchitta CV.

J Cell Biol. 2012 Apr 2;197(1):7-9. doi: 10.1083/jcb.201202140.


Distinctive characteristics of bronchial reticular basement membrane and vessel remodelling in chronic obstructive pulmonary disease (COPD) and in asthma: they are not the same disease.

Soltani A, Muller HK, Sohal SS, Reid DW, Weston S, Wood-Baker R, Walters EH.

Histopathology. 2012 May;60(6):964-70. doi: 10.1111/j.1365-2559.2011.04147.x. Epub 2012 Feb 9.


Primary role for endoplasmic reticulum-bound ribosomes in cellular translation identified by ribosome profiling.

Reid DW, Nicchitta CV.

J Biol Chem. 2012 Feb 17;287(8):5518-27. doi: 10.1074/jbc.M111.312280. Epub 2011 Dec 23.


Lung health care for Aboriginal and Torres Strait Islander Queenslanders: breathing easy is not so easy.

O'Grady KA, Revell A, Maguire GP, Millonig R, Newman MA, Reid DW, Hill DC, Chang AB.

Aust Health Rev. 2011 Nov;35(4):512-9. doi: 10.1071/AH10973.


Changes in cystic fibrosis mortality in Australia, 1979-2005.

Reid DW, Blizzard CL, Shugg DM, Flowers C, Cash C, Greville HM.

Med J Aust. 2011 Oct 3;195(7):392-5.


Integrative regulatory mapping indicates that the RNA-binding protein HuR couples pre-mRNA processing and mRNA stability.

Mukherjee N, Corcoran DL, Nusbaum JD, Reid DW, Georgiev S, Hafner M, Ascano M Jr, Tuschl T, Ohler U, Keene JD.

Mol Cell. 2011 Aug 5;43(3):327-39. doi: 10.1016/j.molcel.2011.06.007. Epub 2011 Jun 30.

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