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Items: 20

1.

The engineering principles of combining a transcriptional incoherent feedforward loop with negative feedback.

Reeves GT.

J Biol Eng. 2019 Jul 10;13:62. doi: 10.1186/s13036-019-0190-3. eCollection 2019.

2.

A facilitated diffusion mechanism establishes the Drosophila Dorsal gradient.

Carrell SN, O'Connell MD, Jacobsen T, Pomeroy AE, Hayes SM, Reeves GT.

Development. 2017 Dec 1;144(23):4450-4461. doi: 10.1242/dev.155549. Epub 2017 Nov 2.

3.

Analyzing negative feedback using a synthetic gene network expressed in the Drosophila melanogaster embryo.

Jermusyk AA, Murphy NP, Reeves GT.

BMC Syst Biol. 2016 Aug 31;10(1):85. doi: 10.1186/s12918-016-0330-z.

4.

The presence of nuclear cactus in the early Drosophila embryo may extend the dynamic range of the dorsal gradient.

O'Connell MD, Reeves GT.

PLoS Comput Biol. 2015 Apr 16;11(4):e1004159. doi: 10.1371/journal.pcbi.1004159. eCollection 2015 Apr.

5.

Imaging the dorsal-ventral axis of live and fixed Drosophila melanogaster embryos.

Carrell SN, Reeves GT.

Methods Mol Biol. 2015;1189:63-78. doi: 10.1007/978-1-4939-1164-6_5.

PMID:
25245687
6.

Size-dependent regulation of dorsal-ventral patterning in the early Drosophila embryo.

Garcia M, Nahmad M, Reeves GT, Stathopoulos A.

Dev Biol. 2013 Sep 1;381(1):286-99. doi: 10.1016/j.ydbio.2013.06.020. Epub 2013 Jun 22.

7.

Image analysis and empirical modeling of gene and protein expression.

Trisnadi N, Altinok A, Stathopoulos A, Reeves GT.

Methods. 2013 Jul 15;62(1):68-78. doi: 10.1016/j.ymeth.2012.09.016. Epub 2012 Oct 24.

8.

Dorsal-ventral gene expression in the Drosophila embryo reflects the dynamics and precision of the dorsal nuclear gradient.

Reeves GT, Trisnadi N, Truong TV, Nahmad M, Katz S, Stathopoulos A.

Dev Cell. 2012 Mar 13;22(3):544-57. doi: 10.1016/j.devcel.2011.12.007. Epub 2012 Feb 16.

9.

Mesoderm migration in Drosophila is a multi-step process requiring FGF signaling and integrin activity.

McMahon A, Reeves GT, Supatto W, Stathopoulos A.

Development. 2010 Jul;137(13):2167-75. doi: 10.1242/dev.051573.

10.

Graded dorsal and differential gene regulation in the Drosophila embryo.

Reeves GT, Stathopoulos A.

Cold Spring Harb Perspect Biol. 2009 Oct;1(4):a000836. doi: 10.1101/cshperspect.a000836. Review.

11.

Quantitative imaging of the Dorsal nuclear gradient reveals limitations to threshold-dependent patterning in Drosophila.

Liberman LM, Reeves GT, Stathopoulos A.

Proc Natl Acad Sci U S A. 2009 Dec 29;106(52):22317-22. doi: 10.1073/pnas.0906227106. Epub 2009 Dec 16.

12.

Biological systems from an engineer's point of view.

Reeves GT, Fraser SE.

PLoS Biol. 2009 Jan 20;7(1):e21. doi: 10.1371/journal.pbio.1000021. No abstract available.

13.

Quantitative models of developmental pattern formation.

Reeves GT, Muratov CB, Schüpbach T, Shvartsman SY.

Dev Cell. 2006 Sep;11(3):289-300. Review.

14.

Quantifying the Gurken morphogen gradient in Drosophila oogenesis.

Goentoro LA, Reeves GT, Kowal CP, Martinelli L, Schüpbach T, Shvartsman SY.

Dev Cell. 2006 Aug;11(2):263-72.

15.

Computational analysis of EGFR inhibition by Argos.

Reeves GT, Kalifa R, Klein DE, Lemmon MA, Shvartsman SY.

Dev Biol. 2005 Aug 15;284(2):523-35.

16.

Predicting stability of mixed microbial cultures from single species experiments: 2. Physiological model.

Pilyugin SS, Reeves GT, Narang A.

Math Biosci. 2004 Dec;192(2):111-36. Epub 2004 Dec 8.

PMID:
15627489
17.

Predicting stability of mixed microbial cultures from single species experiments: 1. Phenomenological model.

Pilyugin SS, Reeves GT, Narang A.

Math Biosci. 2004 Dec;192(2):85-109. Epub 2004 Dec 8.

PMID:
15627488
18.

Argos inhibits epidermal growth factor receptor signalling by ligand sequestration.

Klein DE, Nappi VM, Reeves GT, Shvartsman SY, Lemmon MA.

Nature. 2004 Aug 26;430(7003):1040-4.

19.

Growth of mixed cultures on mixtures of substitutable substrates: the operating diagram for a structured model.

Reeves GT, Narang A, Pilyugin SS.

J Theor Biol. 2004 Jan 21;226(2):143-57.

PMID:
14643184
20.

The dynamics of single-substrate continuous cultures: the role of transport enzymes.

Shoemaker J, Reeves GT, Gupta S, Pilyugin SS, Egli T, Narang A.

J Theor Biol. 2003 Jun 7;222(3):307-22.

PMID:
12732477

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