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RNA Polymerase: Step-by-Step Kinetics and Mechanism of Transcription Initiation.

Henderson KL, Evensen CE, Molzahn CM, Felth LC, Dyke S, Liao G, Shkel IA, Record MT Jr.

Biochemistry. 2019 May 7;58(18):2339-2352. doi: 10.1021/acs.biochem.9b00049. Epub 2019 Apr 19.


Ultra-Thin Platinum Deposits by Surface-Limited Redox Replacement of Tellurium.

Haidar F, Maas M, Piarristeguy A, Pradel A, Cavaliere S, Record MC.

Nanomaterials (Basel). 2018 Oct 15;8(10). pii: E836. doi: 10.3390/nano8100836.


Correction to "Contributions of Coulombic and Hofmeister Effects to the Osmotic Activation of Escherichia coli Transporter ProP".

Culham DE, Shkel IA, Record MT Jr, Wood JM.

Biochemistry. 2018 Aug 21;57(33):5072. doi: 10.1021/acs.biochem.8b00791. Epub 2018 Aug 9. No abstract available.


Extracellular vesicles: lipids as key components of their biogenesis and functions.

Record M, Silvente-Poirot S, Poirot M, Wakelam MJO.

J Lipid Res. 2018 Aug;59(8):1316-1324. doi: 10.1194/jlr.E086173. Epub 2018 May 15. Review.


Introduction to the Thematic Review Series on Extracellular Vesicles: a focus on the role of lipids.

Record M.

J Lipid Res. 2018 Aug;59(8):1313-1315. doi: 10.1194/jlr.E086132. Epub 2018 May 15. No abstract available.


Quantifying Interactions of Nucleobase Atoms with Model Compounds for the Peptide Backbone and Glutamine and Asparagine Side Chains in Water.

Cheng X, Shkel IA, Molzahn C, Lambert D, Karim R, Record MT Jr.

Biochemistry. 2018 Apr 17;57(15):2227-2237. doi: 10.1021/acs.biochem.8b00087. Epub 2018 Apr 5.


Dendrogenin A drives LXR to trigger lethal autophagy in cancers.

Segala G, David M, de Medina P, Poirot MC, Serhan N, Vergez F, Mougel A, Saland E, Carayon K, Leignadier J, Caron N, Voisin M, Cherier J, Ligat L, Lopez F, Noguer E, Rives A, Payré B, Saati TA, Lamaziere A, Despres G, Lobaccaro JM, Baron S, Demur C, de Toni F, Larrue C, Boutzen H, Thomas F, Sarry JE, Tosolini M, Picard D, Record M, Récher C, Poirot M, Silvente-Poirot S.

Nat Commun. 2017 Dec 4;8(1):1903. doi: 10.1038/s41467-017-01948-9.


Identification of a tumor-promoter cholesterol metabolite in human breast cancers acting through the glucocorticoid receptor.

Voisin M, de Medina P, Mallinger A, Dalenc F, Huc-Claustre E, Leignadier J, Serhan N, Soules R, Ségala G, Mougel A, Noguer E, Mhamdi L, Bacquié E, Iuliano L, Zerbinati C, Lacroix-Triki M, Chaltiel L, Filleron T, Cavaillès V, Al Saati T, Rochaix P, Duprez-Paumier R, Franchet C, Ligat L, Lopez F, Record M, Poirot M, Silvente-Poirot S.

Proc Natl Acad Sci U S A. 2017 Oct 31;114(44):E9346-E9355. doi: 10.1073/pnas.1707965114. Epub 2017 Oct 12.


The mechanism and high-free-energy transition state of lac repressor-lac operator interaction.

Sengupta R, Capp MW, Shkel IA, Record MT Jr.

Nucleic Acids Res. 2017 Dec 15;45(22):12671-12680. doi: 10.1093/nar/gkx862.


Sex- and Estrus-Dependent Differences in Rat Basolateral Amygdala.

Blume SR, Freedberg M, Vantrease JE, Chan R, Padival M, Record MJ, DeJoseph MR, Urban JH, Rosenkranz JA.

J Neurosci. 2017 Nov 1;37(44):10567-10586. doi: 10.1523/JNEUROSCI.0758-17.2017. Epub 2017 Sep 27.


Microbe and host lipids.

Nigou J, Touqui L, Record M.

Biochimie. 2017 Oct;141:1-2. doi: 10.1016/j.biochi.2017.08.009. Epub 2017 Aug 19. No abstract available.


Experimental Atom-by-Atom Dissection of Amide-Amide and Amide-Hydrocarbon Interactions in H2O.

Cheng X, Shkel IA, O'Connor K, Henrich J, Molzahn C, Lambert D, Record MT Jr.

J Am Chem Soc. 2017 Jul 26;139(29):9885-9894. doi: 10.1021/jacs.7b03261. Epub 2017 Jul 17.


Mechanism of transcription initiation and promoter escape by E. coli RNA polymerase.

Henderson KL, Felth LC, Molzahn CM, Shkel I, Wang S, Chhabra M, Ruff EF, Bieter L, Kraft JE, Record MT Jr.

Proc Natl Acad Sci U S A. 2017 Apr 11;114(15):E3032-E3040. doi: 10.1073/pnas.1618675114. Epub 2017 Mar 27.


Strain-induced electronic band convergence: effect on the Seebeck coefficient of Mg2Si for thermoelectric applications.

Balout H, Boulet P, Record MC.

J Mol Model. 2017 Apr;23(4):130. doi: 10.1007/s00894-017-3304-1. Epub 2017 Mar 23.


Basis of Protein Stabilization by K Glutamate: Unfavorable Interactions with Carbon, Oxygen Groups.

Cheng X, Guinn EJ, Buechel E, Wong R, Sengupta R, Shkel IA, Record MT Jr.

Biophys J. 2016 Nov 1;111(9):1854-1865. doi: 10.1016/j.bpj.2016.08.050.


From tamoxifen to dendrogenin A: The discovery of a mammalian tumor suppressor and cholesterol metabolite.

Silvente-Poirot S, de Medina P, Record M, Poirot M.

Biochimie. 2016 Nov;130:109-114. doi: 10.1016/j.biochi.2016.05.016. Epub 2016 Jun 1. Review.


Positioning the Intracellular Salt Potassium Glutamate in the Hofmeister Series by Chemical Unfolding Studies of NTL9.

Sengupta R, Pantel A, Cheng X, Shkel I, Peran I, Stenzoski N, Raleigh DP, Record MT Jr.

Biochemistry. 2016 Apr 19;55(15):2251-9. doi: 10.1021/acs.biochem.6b00173. Epub 2016 Apr 7.


Fluorescence Resonance Energy Transfer Characterization of DNA Wrapping in Closed and Open Escherichia coli RNA Polymerase-λP(R) Promoter Complexes.

Sreenivasan R, Heitkamp S, Chhabra M, Saecker R, Lingeman E, Poulos M, McCaslin D, Capp MW, Artsimovitch I, Record MT Jr.

Biochemistry. 2016 Apr 12;55(14):2174-86. doi: 10.1021/acs.biochem.6b00125. Epub 2016 Mar 31.


Contributions of Coulombic and Hofmeister Effects to the Osmotic Activation of Escherichia coli Transporter ProP.

Culham DE, Shkel IA, Record MT Jr, Wood JM.

Biochemistry. 2016 Mar 8;55(9):1301-13. doi: 10.1021/acs.biochem.5b01169. Epub 2016 Feb 25. Erratum in: Biochemistry. 2018 Aug 21;57(33):5072.


E. coli RNA Polymerase Determinants of Open Complex Lifetime and Structure.

Ruff EF, Drennan AC, Capp MW, Poulos MA, Artsimovitch I, Record MT Jr.

J Mol Biol. 2015 Jul 31;427(15):2435-2450. doi: 10.1016/j.jmb.2015.05.024. Epub 2015 Jun 6.


Initial events in bacterial transcription initiation.

Ruff EF, Record MT Jr, Artsimovitch I.

Biomolecules. 2015 May 27;5(2):1035-62. doi: 10.3390/biom5021035. Review.


Chemical Interactions of Polyethylene Glycols (PEGs) and Glycerol with Protein Functional Groups: Applications to Effects of PEG and Glycerol on Protein Processes.

Knowles DB, Shkel IA, Phan NM, Sternke M, Lingeman E, Cheng X, Cheng L, O'Connor K, Record MT.

Biochemistry. 2015 Jun 9;54(22):3528-42. doi: 10.1021/acs.biochem.5b00246. Epub 2015 May 22.


Using solutes and kinetics to probe large conformational changes in the steps of transcription initiation.

Ruff EF, Kontur WS, Record MT Jr.

Methods Mol Biol. 2015;1276:241-61. doi: 10.1007/978-1-4939-2392-2_14.


Intercellular communication by exosomes in placenta: a possible role in cell fusion?

Record M.

Placenta. 2014 May;35(5):297-302. doi: 10.1016/j.placenta.2014.02.009. Epub 2014 Mar 3. Review.


Proteomic analysis of C2C12 myoblast and myotube exosome-like vesicles: a new paradigm for myoblast-myotube cross talk?

Forterre A, Jalabert A, Berger E, Baudet M, Chikh K, Errazuriz E, De Larichaudy J, Chanon S, Weiss-Gayet M, Hesse AM, Record M, Geloen A, Lefai E, Vidal H, Couté Y, Rome S.

PLoS One. 2014 Jan 2;9(1):e84153. doi: 10.1371/journal.pone.0084153. eCollection 2014. Erratum in: PLoS One. 2014;9(1). doi:10.1371/annotation/ecd1e074-2618-4ad0-95c0-efdb467c714b.


Exosomes as new vesicular lipid transporters involved in cell-cell communication and various pathophysiologies.

Record M, Carayon K, Poirot M, Silvente-Poirot S.

Biochim Biophys Acta. 2014 Jan;1841(1):108-20. doi: 10.1016/j.bbalip.2013.10.004. Epub 2013 Oct 16. Review.


Probing the protein-folding mechanism using denaturant and temperature effects on rate constants.

Guinn EJ, Kontur WS, Tsodikov OV, Shkel I, Record MT Jr.

Proc Natl Acad Sci U S A. 2013 Oct 15;110(42):16784-9. doi: 10.1073/pnas.1311948110. Epub 2013 Sep 16.


Quantifying additive interactions of the osmolyte proline with individual functional groups of proteins: comparisons with urea and glycine betaine, interpretation of m-values.

Diehl RC, Guinn EJ, Capp MW, Tsodikov OV, Record MT Jr.

Biochemistry. 2013 Sep 3;52(35):5997-6010. doi: 10.1021/bi400683y. Epub 2013 Aug 21.


Emerging concepts on the role of exosomes in lipid metabolic diseases.

Record M, Poirot M, Silvente-Poirot S.

Biochimie. 2014 Jan;96:67-74. doi: 10.1016/j.biochi.2013.06.016. Epub 2013 Jul 1. Review.


Exosome-like nanoparticles from food: protective nanoshuttles for bioactive cargo.

Record M.

Mol Ther. 2013 Jul;21(7):1294-6. doi: 10.1038/mt.2013.130. No abstract available.


Progesterone and a phospholipase inhibitor increase the endosomal bis(monoacylglycero)phosphate content and block HIV viral particle intercellular transmission.

Chapuy-Regaud S, Subra C, Requena M, de Medina P, Amara S, Delton-Vandenbroucke I, Payre B, Cazabat M, Carriere F, Izopet J, Poirot M, Record M.

Biochimie. 2013 Sep;95(9):1677-88. doi: 10.1016/j.biochi.2013.05.019. Epub 2013 Jun 15.


Quantifying functional group interactions that determine urea effects on nucleic acid helix formation.

Guinn EJ, Schwinefus JJ, Cha HK, McDevitt JL, Merker WE, Ritzer R, Muth GW, Engelsgjerd SW, Mangold KE, Thompson PJ, Kerins MJ, Record MT Jr.

J Am Chem Soc. 2013 Apr 17;135(15):5828-38. doi: 10.1021/ja400965n. Epub 2013 Apr 3. Erratum in: J Am Chem Soc. 2013 Jun 19;135(24):9220.


5,6-Epoxy-cholesterols contribute to the anticancer pharmacology of tamoxifen in breast cancer cells.

Segala G, de Medina P, Iuliano L, Zerbinati C, Paillasse MR, Noguer E, Dalenc F, Payré B, Jordan VC, Record M, Silvente-Poirot S, Poirot M.

Biochem Pharmacol. 2013 Jul 1;86(1):175-89. doi: 10.1016/j.bcp.2013.02.031. Epub 2013 Mar 7.


Vesiclepedia: a compendium for extracellular vesicles with continuous community annotation.

Kalra H, Simpson RJ, Ji H, Aikawa E, Altevogt P, Askenase P, Bond VC, Borràs FE, Breakefield X, Budnik V, Buzas E, Camussi G, Clayton A, Cocucci E, Falcon-Perez JM, Gabrielsson S, Gho YS, Gupta D, Harsha HC, Hendrix A, Hill AF, Inal JM, Jenster G, Krämer-Albers EM, Lim SK, Llorente A, Lötvall J, Marcilla A, Mincheva-Nilsson L, Nazarenko I, Nieuwland R, Nolte-'t Hoen EN, Pandey A, Patel T, Piper MG, Pluchino S, Prasad TS, Rajendran L, Raposo G, Record M, Reid GE, Sánchez-Madrid F, Schiffelers RM, Siljander P, Stensballe A, Stoorvogel W, Taylor D, Thery C, Valadi H, van Balkom BW, Vázquez J, Vidal M, Wauben MH, Yáñez-Mó M, Zoeller M, Mathivanan S.

PLoS Biol. 2012;10(12):e1001450. doi: 10.1371/journal.pbio.1001450. Epub 2012 Dec 18.


Key roles of the downstream mobile jaw of Escherichia coli RNA polymerase in transcription initiation.

Drennan A, Kraemer M, Capp M, Gries T, Ruff E, Sheppard C, Wigneshweraraj S, Artsimovitch I, Record MT Jr.

Biochemistry. 2012 Nov 27;51(47):9447-59. doi: 10.1021/bi301260u. Epub 2012 Nov 14.


Inhibition of phospholipase A1, lipase and galactolipase activities of pancreatic lipase-related protein 2 by methyl arachidonyl fluorophosphonate (MAFP).

Amara S, Delorme V, Record M, Carrière F.

Biochim Biophys Acta. 2012 Nov;1821(11):1379-85. doi: 10.1016/j.bbalip.2012.07.014. Epub 2012 Jul 24.


Influence of the modified Becke-Johnson exchange potential on thermoelectric properties: application to Mg2Si.

Boulet P, Record MC.

J Chem Phys. 2011 Dec 21;135(23):234702. doi: 10.1063/1.3666851.


Quantifying why urea is a protein denaturant, whereas glycine betaine is a protein stabilizer.

Guinn EJ, Pegram LM, Capp MW, Pollock MN, Record MT Jr.

Proc Natl Acad Sci U S A. 2011 Oct 11;108(41):16932-7. doi: 10.1073/pnas.1109372108. Epub 2011 Sep 19.


Separation of preferential interaction and excluded volume effects on DNA duplex and hairpin stability.

Knowles DB, LaCroix AS, Deines NF, Shkel I, Record MT Jr.

Proc Natl Acad Sci U S A. 2011 Aug 2;108(31):12699-704. doi: 10.1073/pnas.1103382108. Epub 2011 Jul 8.


Importance of cholesterol and oxysterols metabolism in the pharmacology of tamoxifen and other AEBS ligands.

de Medina P, Paillasse MR, Ségala G, Khallouki F, Brillouet S, Dalenc F, Courbon F, Record M, Poirot M, Silvente-Poirot S.

Chem Phys Lipids. 2011 Sep;164(6):432-7. doi: 10.1016/j.chemphyslip.2011.05.005. Epub 2011 May 27. Review.


Bis (monoacylglycero) phosphate interfacial properties and lipolysis by pancreatic lipase-related protein 2, an enzyme present in THP-1 human monocytes.

Record M, Amara S, Subra C, Jiang G, Prestwich GD, Ferrato F, Carrière F.

Biochim Biophys Acta. 2011 Jul-Aug;1811(7-8):419-30. doi: 10.1016/j.bbalip.2011.04.008. Epub 2011 Apr 30.


Nonspecific DNA binding and bending by HUαβ: interfaces of the three binding modes characterized by salt-dependent thermodynamics.

Koh J, Shkel I, Saecker RM, Record MT Jr.

J Mol Biol. 2011 Jul 8;410(2):241-67. doi: 10.1016/j.jmb.2011.04.001. Epub 2011 Apr 12.


Mechanism of bacterial transcription initiation: RNA polymerase - promoter binding, isomerization to initiation-competent open complexes, and initiation of RNA synthesis.

Saecker RM, Record MT Jr, Dehaseth PL.

J Mol Biol. 2011 Oct 7;412(5):754-71. doi: 10.1016/j.jmb.2011.01.018. Epub 2011 Mar 1.


Exosomes as intercellular signalosomes and pharmacological effectors.

Record M, Subra C, Silvente-Poirot S, Poirot M.

Biochem Pharmacol. 2011 May 15;81(10):1171-82. doi: 10.1016/j.bcp.2011.02.011. Epub 2011 Mar 1. Review.


Protein diffusion in the periplasm of E. coli under osmotic stress.

Sochacki KA, Shkel IA, Record MT, Weisshaar JC.

Biophys J. 2011 Jan 5;100(1):22-31. doi: 10.1016/j.bpj.2010.11.044.


One-step DNA melting in the RNA polymerase cleft opens the initiation bubble to form an unstable open complex.

Gries TJ, Kontur WS, Capp MW, Saecker RM, Record MT Jr.

Proc Natl Acad Sci U S A. 2010 Jun 8;107(23):10418-23. doi: 10.1073/pnas.1000967107. Epub 2010 May 18.


Exosomes account for vesicle-mediated transcellular transport of activatable phospholipases and prostaglandins.

Subra C, Grand D, Laulagnier K, Stella A, Lambeau G, Paillasse M, De Medina P, Monsarrat B, Perret B, Silvente-Poirot S, Poirot M, Record M.

J Lipid Res. 2010 Aug;51(8):2105-20. doi: 10.1194/jlr.M003657. Epub 2010 Apr 27.

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