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Coordinating the real-time use of global influenza activity data for better public health planning.

Biggerstaff M, Dahlgren FS, Fitzner J, George D, Hammond A, Hall I, Haw D, Imai N, Johansson MA, Kramer S, McCaw JM, Moss R, Pebody R, Read JM, Reed C, Reich NG, Riley S, Vandemaele K, Viboud C, Wu JT.

Influenza Other Respir Viruses. 2020 Mar;14(2):105-110. doi: 10.1111/irv.12705. Epub 2019 Dec 3.


Childhood malaria case incidence in Malawi between 2004 and 2017: spatio-temporal modelling of climate and non-climate factors.

Chirombo J, Ceccato P, Lowe R, Terlouw DJ, Thomson MC, Gumbo A, Diggle PJ, Read JM.

Malar J. 2020 Jan 6;19(1):5. doi: 10.1186/s12936-019-3097-z.


Provider Preference in Exam Room Layout Design and Computing.

Read JM, Weiler DT, Satterly T, Soares C, Saleem JJ.

Appl Clin Inform. 2019 Oct;10(5):972-980. doi: 10.1055/s-0039-3401813. Epub 2019 Dec 25.


Patterns of human social contact and contact with animals in Shanghai, China.

Zhang J, Klepac P, Read JM, Rosello A, Wang X, Lai S, Li M, Song Y, Wei Q, Jiang H, Yang J, Lynn H, Flasche S, Jit M, Yu H.

Sci Rep. 2019 Oct 22;9(1):15141. doi: 10.1038/s41598-019-51609-8.


Reduction in hospitalisations for acute gastroenteritis-associated childhood seizures since introduction of rotavirus vaccination: a time-series and change-point analysis of hospital admissions in England.

Hungerford DJ, French N, Iturriza-Gómara M, Read JM, Cunliffe NA, Vivancos R.

J Epidemiol Community Health. 2019 Nov;73(11):1020-1025. doi: 10.1136/jech-2019-213055. Epub 2019 Sep 11.


The use and reporting of airline passenger data for infectious disease modelling: a systematic review.

Meslé MMI, Hall IM, Christley RM, Leach S, Read JM.

Euro Surveill. 2019 Aug;24(31). doi: 10.2807/1560-7917.ES.2019.24.31.1800216.


Domestic River Water Use and Risk of Typhoid Fever: Results From a Case-control Study in Blantyre, Malawi.

Gauld JS, Olgemoeller F, Nkhata R, Li C, Chirambo A, Morse T, Gordon MA, Read JM, Heyderman RS, Kennedy N, Diggle PJ, Feasey NA.

Clin Infect Dis. 2020 Mar 17;70(7):1278-1284. doi: 10.1093/cid/ciz405.


Differential mobility and local variation in infection attack rate.

Haw DJ, Cummings DAT, Lessler J, Salje H, Read JM, Riley S.

PLoS Comput Biol. 2019 Jan 22;15(1):e1006600. doi: 10.1371/journal.pcbi.1006600. eCollection 2019 Jan.


Who interacts with whom? Social mixing insights from a rural population in India.

Kumar S, Gosain M, Sharma H, Swetts E, Amarchand R, Kumar R, Lafond KE, Dawood FS, Jain S, Widdowson MA, Read JM, Krishnan A.

PLoS One. 2018 Dec 21;13(12):e0209039. doi: 10.1371/journal.pone.0209039. eCollection 2018.


Pneumococcal carriage in households in Karonga District, Malawi, before and after introduction of 13-valent pneumococcal conjugate vaccination.

Heinsbroek E, Tafatatha T, Phiri A, Swarthout TD, Alaerts M, Crampin AC, Chisambo C, Mwiba O, Read JM, French N.

Vaccine. 2018 Nov 19;36(48):7369-7376. doi: 10.1016/j.vaccine.2018.10.021. Epub 2018 Oct 21.


Prevalence and risk factors of community-associated methicillin-resistant Staphylococcus aureus carriage in Asia-Pacific region from 2000 to 2016: a systematic review and meta-analysis.

Wong JW, Ip M, Tang A, Wei VW, Wong SY, Riley S, Read JM, Kwok KO.

Clin Epidemiol. 2018 Oct 12;10:1489-1501. doi: 10.2147/CLEP.S160595. eCollection 2018. Review.


Mitigating bias in observational vaccine effectiveness studies using simulated comparator populations: Application to rotavirus vaccination in the UK.

Hungerford D, Vivancos R, Read JM, Bonnett LJ, Bar-Zeev N, Iturriza-Gómara M, Cunliffe NA, French N.

Vaccine. 2018 Oct 29;36(45):6674-6682. doi: 10.1016/j.vaccine.2018.09.051. Epub 2018 Oct 4.


Case Series of Severe Neurologic Sequelae of Ebola Virus Disease during Epidemic, Sierra Leone.

Howlett PJ, Walder AR, Lisk DR, Fitzgerald F, Sevalie S, Lado M, N'jai A, Brown CS, Sahr F, Sesay F, Read JM, Steptoe PJ, Beare NAV, Dwivedi R, Solbrig M, Deen GF, Solomon T, Semple MG, Scott JT.

Emerg Infect Dis. 2018 Aug;24(8):1412-1421. doi: 10.3201/eid2408.171367.


Primary care influenza-like illness surveillance in Ho Chi Minh City, Vietnam 2013-2015.

Todd S, Huong NTC, Thanh NTL, Vy NHT, Hung NT, Thao TTN, Phuong HT, van Doorn R, Hang VTT, Chau NVV, Read JM, Lalloo DG, Boni MF.

Influenza Other Respir Viruses. 2018 Sep;12(5):623-631. doi: 10.1111/irv.12574. Epub 2018 Jul 7.


A systematic review of transmission dynamic studies of methicillin-resistant Staphylococcus aureus in non-hospital residential facilities.

Kwok KO, Read JM, Tang A, Chen H, Riley S, Kam KM.

BMC Infect Dis. 2018 Apr 18;18(1):188. doi: 10.1186/s12879-018-3060-6.


Rotavirus vaccine impact and socioeconomic deprivation: an interrupted time-series analysis of gastrointestinal disease outcomes across primary and secondary care in the UK.

Hungerford D, Vivancos R, Read JM, Iturriza-Gόmara M, French N, Cunliffe NA.

BMC Med. 2018 Jan 29;16(1):10. doi: 10.1186/s12916-017-0989-z.


Temporal variation of human encounters and the number of locations in which they occur: a longitudinal study of Hong Kong residents.

Kwok KO, Cowling B, Wei V, Riley S, Read JM.

J R Soc Interface. 2018 Jan;15(138). pii: 20170838. doi: 10.1098/rsif.2017.0838.


Prospective cohort study to investigate the burden and transmission of acute gastroenteritis in care homes: a study protocol.

Inns T, Pulawska-Czub A, Harris JP, Vivancos R, Read JM, Beeching NJ, Allen DJ, Iturriza-Gomara M, O'Brien SJ.

BMJ Open. 2017 Nov 3;7(11):e018867. doi: 10.1136/bmjopen-2017-018867.


A comparison of hemagglutination inhibition and neutralization assays for characterizing immunity to seasonal influenza A.

Truelove S, Zhu H, Lessler J, Riley S, Read JM, Wang S, Kwok KO, Guan Y, Jiang CQ, Cummings DA.

Influenza Other Respir Viruses. 2016 Nov;10(6):518-524. doi: 10.1111/irv.12408. Epub 2016 Aug 27.


Line Transect Surveys Underdetect Terrestrial Mammals: Implications for the Sustainability of Subsistence Hunting.

Fragoso JM, Levi T, Oliveira LF, Luzar JB, Overman H, Read JM, Silvius KM.

PLoS One. 2016 Apr 13;11(4):e0152659. doi: 10.1371/journal.pone.0152659. eCollection 2016.


Early impact of rotavirus vaccination in a large paediatric hospital in the UK.

Hungerford D, Read JM, Cooke RP, Vivancos R, Iturriza-Gómara M, Allen DJ, French N, Cunliffe N.

J Hosp Infect. 2016 Jun;93(2):117-20. doi: 10.1016/j.jhin.2015.12.010. Epub 2015 Dec 31.


Cohort Profile: A study of influenza immunity in the urban and rural Guangzhou region of China: the Fluscape Study.

Jiang CQ, Lessler J, Kim L, Kwok KO, Read JM, Wang S, Tan L, Hast M, Zhu H, Guan Y, Riley S, Cummings DA.

Int J Epidemiol. 2017 Apr 1;46(2):e16. doi: 10.1093/ije/dyv353. No abstract available.


In-season and out-of-season variation of rotavirus genotype distribution and age of infection across 12 European countries before the introduction of routine vaccination, 2007/08 to 2012/13.

Hungerford D, Vivancos R; EuroRotaNet network members, Read JM, Pitzer VE, Cunliffe N, French N, Iturriza-Gómara M.

Euro Surveill. 2016;21(2). doi: 10.2807/1560-7917.ES.2016.21.2.30106.


Pneumococcal Acquisition Among Infants Exposed to HIV in Rural Malawi: A Longitudinal Household Study.

Heinsbroek E, Tafatatha T, Chisambo C, Phiri A, Mwiba O, Ngwira B, Crampin AC, Read JM, French N.

Am J Epidemiol. 2016 Jan 1;183(1):70-8. doi: 10.1093/aje/kwv134. Epub 2015 Dec 1.


Disabling chronic conditions in childhood and socioeconomic disadvantage: a systematic review and meta-analyses of observational studies.

Spencer NJ, Blackburn CM, Read JM.

BMJ Open. 2015 Sep 3;5(9):e007062. doi: 10.1136/bmjopen-2014-007062. Review.


Persisting high prevalence of pneumococcal carriage among HIV-infected adults receiving antiretroviral therapy in Malawi: a cohort study.

Heinsbroek E, Tafatatha T, Phiri A, Ngwira B, Crampin AC, Read JM, French N.

AIDS. 2015 Sep 10;29(14):1837-44. doi: 10.1097/QAD.0000000000000755.


Estimating the life course of influenza A(H3N2) antibody responses from cross-sectional data.

Kucharski AJ, Lessler J, Read JM, Zhu H, Jiang CQ, Guan Y, Cummings DA, Riley S.

PLoS Biol. 2015 Mar 3;13(3):e1002082. doi: 10.1371/journal.pbio.1002082. eCollection 2015 Mar.


European red squirrel population dynamics driven by squirrelpox at a gray squirrel invasion interface.

Chantrey J, Dale TD, Read JM, White S, Whitfield F, Jones D, McInnes CJ, Begon M.

Ecol Evol. 2014 Oct;4(19):3788-99. doi: 10.1002/ece3.1216. Epub 2014 Sep 11.


Enhancing disease surveillance with novel data streams: challenges and opportunities.

Althouse BM, Scarpino SV, Meyers LA, Ayers JW, Bargsten M, Baumbach J, Brownstein JS, Castro L, Clapham H, Cummings DA, Del Valle S, Eubank S, Fairchild G, Finelli L, Generous N, George D, Harper DR, Hébert-Dufresne L, Johansson MA, Konty K, Lipsitch M, Milinovich G, Miller JD, Nsoesie EO, Olson DR, Paul M, Polgreen PM, Priedhorsky R, Read JM, Rodríguez-Barraquer I, Smith DJ, Stefansen C, Swerdlow DL, Thompson D, Vespignani A, Wesolowski A.

EPJ Data Sci. 2015;4. pii: 17. doi: 10.1140/epjds/s13688-015-0054-0. Epub 2015 Oct 16.


Testing the hypothesis of preferential attachment in social network formation.

House T, Read JM, Danon L, Keeling MJ.

EPJ Data Sci. 2015;4:13. Epub 2015 Oct 9.


Effectiveness of screening for Ebola at airports.

Read JM, Diggle PJ, Chirombo J, Solomon T, Baylis M.

Lancet. 2015 Jan 3;385(9962):23-24. doi: 10.1016/S0140-6736(14)61894-8. Epub 2014 Nov 13. No abstract available.


Risk factors for UK Plasmodium falciparum cases.

Pinsent A, Read JM, Griffin JT, Smith V, Gething PW, Ghani AC, Pasvol G, Hollingsworth TD.

Malar J. 2014 Aug 4;13:298. doi: 10.1186/1475-2875-13-298.


Social contacts and the locations in which they occur as risk factors for influenza infection.

Kwok KO, Cowling BJ, Wei VW, Wu KM, Read JM, Lessler J, Cummings DA, Peiris JS, Riley S.

Proc Biol Sci. 2014 Aug 22;281(1789):20140709. doi: 10.1098/rspb.2014.0709.


[An international collaborative study on influenza viruses antibody titers and contact patterns of individuals in rural and urban household of Guangzhou].

Kwok KO, Jiang C, Tan L, Justin L, Read JM, Zhu H, Guan Y, Cummings DA, Riley S.

Zhonghua Liu Xing Bing Xue Za Zhi. 2014 Apr;35(4):433-6. Chinese.


The contribution of social behaviour to the transmission of influenza A in a human population.

Kucharski AJ, Kwok KO, Wei VW, Cowling BJ, Read JM, Lessler J, Cummings DA, Riley S.

PLoS Pathog. 2014 Jun 26;10(6):e1004206. doi: 10.1371/journal.ppat.1004206. eCollection 2014 Jun.


Social mixing patterns in rural and urban areas of southern China.

Read JM, Lessler J, Riley S, Wang S, Tan LJ, Kwok KO, Guan Y, Jiang CQ, Cummings DA.

Proc Biol Sci. 2014 Apr 30;281(1785):20140268. doi: 10.1098/rspb.2014.0268. Print 2014 Jun 22.


The spatiotemporal association of non-prescription retail sales with cases during the 2009 influenza pandemic in Great Britain.

Todd S, Diggle PJ, White PJ, Fearne A, Read JM.

BMJ Open. 2014 Apr 29;4(4):e004869. doi: 10.1136/bmjopen-2014-004869.


Social encounter networks: characterizing Great Britain.

Danon L, Read JM, House TA, Vernon MC, Keeling MJ.

Proc Biol Sci. 2013 Jun 26;280(1765):20131037. doi: 10.1098/rspb.2013.1037. Print 2013 Aug 22.


Evidence for antigenic seniority in influenza A (H3N2) antibody responses in southern China.

Lessler J, Riley S, Read JM, Wang S, Zhu H, Smith GJ, Guan Y, Jiang CQ, Cummings DA.

PLoS Pathog. 2012;8(7):e1002802. doi: 10.1371/journal.ppat.1002802. Epub 2012 Jul 19.


Social encounter networks: collective properties and disease transmission.

Danon L, House TA, Read JM, Keeling MJ.

J R Soc Interface. 2012 Nov 7;9(76):2826-33. Epub 2012 Jun 20.


Close encounters of the infectious kind: methods to measure social mixing behaviour.

Read JM, Edmunds WJ, Riley S, Lessler J, Cummings DA.

Epidemiol Infect. 2012 Dec;140(12):2117-30. doi: 10.1017/S0950268812000842. Epub 2012 Jun 12. Review.


Childhood disability and socio-economic circumstances in low and middle income countries: systematic review.

Simkiss DE, Blackburn CM, Mukoro FO, Read JM, Spencer NJ.

BMC Pediatr. 2011 Dec 21;11:119. doi: 10.1186/1471-2431-11-119. Review.


Location-specific patterns of exposure to recent pre-pandemic strains of influenza A in southern China.

Lessler J, Cummings DA, Read JM, Wang S, Zhu H, Smith GJ, Guan Y, Jiang CQ, Riley S.

Nat Commun. 2011 Aug 9;2:423. doi: 10.1038/ncomms1432.


Modelling the impact of local reactive school closures on critical care provision during an influenza pandemic.

House T, Baguelin M, Van Hoek AJ, White PJ, Sadique Z, Eames K, Read JM, Hens N, Melegaro A, Edmunds WJ, Keeling MJ.

Proc Biol Sci. 2011 Sep 22;278(1719):2753-60. doi: 10.1098/rspb.2010.2688. Epub 2011 Feb 2.


Prevalence and social patterning of limiting long-term illness/disability in children and young people under the age of 20 years in 2001: UK census-based cross-sectional study.

Spencer NJ, Blackburn CM, Read JM.

Child Care Health Dev. 2010 Jul;36(4):566-73. doi: 10.1111/j.1365-2214.2009.01053.x. Epub 2009 Dec 29. No abstract available.


Epidemic prediction and control in weighted networks.

Eames KT, Read JM, Edmunds WJ.

Epidemics. 2009 Mar;1(1):70-6. doi: 10.1016/j.epidem.2008.12.001. Epub 2008 Dec 25.


The spatial pattern of nitrogen cycling in the Adirondack Park, New York.

McNeil BE, Read JM, Sullivan TJ, McDonnell TC, Fernandez IJ, Driscoll CT.

Ecol Appl. 2008 Mar;18(2):438-52.


Dynamic social networks and the implications for the spread of infectious disease.

Read JM, Eames KT, Edmunds WJ.

J R Soc Interface. 2008 Sep 6;5(26):1001-7. doi: 10.1098/rsif.2008.0013.

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