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Items: 1 to 50 of 350

1.

Asymptomatic Bacterial Vaginosis Is Associated With Depletion of Mature Superficial Cells Shed From the Vaginal Epithelium.

O'Hanlon DE, Gajer P, Brotman RM, Ravel J.

Front Cell Infect Microbiol. 2020 Mar 10;10:106. doi: 10.3389/fcimb.2020.00106. eCollection 2020.

2.

Authors' reply re: The vaginal metabolome and microbiota of cervical HPV-positive and HPV-negative women: a cross-sectional analysis.

Borgogna JC, Shardell MD, Santori EK, Nelson TM, Rath JM, Glover ED, Ravel J, Gravitt P, Yeoman CJ, Brotman RM.

BJOG. 2020 Mar 10. doi: 10.1111/1471-0528.16148. [Epub ahead of print] No abstract available.

PMID:
32154972
3.

Intermittent Lactobacilli-containing Vaginal Probiotic or Metronidazole Use to Prevent Bacterial Vaginosis Recurrence: A Pilot Study Incorporating Microscopy and Sequencing.

van de Wijgert JHHM, Verwijs MC, Agaba SK, Bronowski C, Mwambarangwe L, Uwineza M, Lievens E, Nivoliez A, Ravel J, Darby AC.

Sci Rep. 2020 Mar 3;10(1):3884. doi: 10.1038/s41598-020-60671-6.

4.

A comprehensive non-redundant gene catalog reveals extensive within-community intraspecies diversity in the human vagina.

Ma B, France MT, Crabtree J, Holm JB, Humphrys MS, Brotman RM, Ravel J.

Nat Commun. 2020 Feb 26;11(1):940. doi: 10.1038/s41467-020-14677-3.

5.

The association of Chlamydia trachomatis and Mycoplasma genitalium infection with the vaginal metabolome.

Borgogna JC, Shardell MD, Yeoman CJ, Ghanem KG, Kadriu H, Ulanov AV, Gaydos CA, Hardick J, Robinson CK, Bavoil PM, Ravel J, Brotman RM, Tuddenham S.

Sci Rep. 2020 Feb 25;10(1):3420. doi: 10.1038/s41598-020-60179-z.

6.

Dietary macronutrient intake and molecular-bacterial vaginosis: Role of fiber.

Shivakoti R, Tuddenham S, Caulfield LE, Murphy C, Robinson C, Ravel J, Ghanem KG, Brotman RM.

Clin Nutr. 2020 Jan 29. pii: S0261-5614(20)30031-5. doi: 10.1016/j.clnu.2020.01.011. [Epub ahead of print]

PMID:
32033845
7.

[Narcolepsy: From the discovery of a wake promoting peptide to autoimmune T cell biology and molecular mimicry with flu epitopes].

Ravel JM, Mignot EJM.

Biol Aujourdhui. 2019;213(3-4):87-108. doi: 10.1051/jbio/2019026. Epub 2019 Dec 12. French.

PMID:
31829930
8.

Cervicovaginal microbial communities deficient in Lactobacillus species are associated with second trimester short cervix.

Gerson KD, McCarthy C, Elovitz MA, Ravel J, Sammel MD, Burris HH.

Am J Obstet Gynecol. 2019 Dec 6. pii: S0002-9378(19)32704-8. doi: 10.1016/j.ajog.2019.11.1283. [Epub ahead of print]

PMID:
31816307
9.

The vaginal metabolome and microbiota of cervical HPV-positive and HPV-negative women: a cross-sectional analysis.

Borgogna JC, Shardell MD, Santori EK, Nelson TM, Rath JM, Glover ED, Ravel J, Gravitt PE, Yeoman CJ, Brotman RM.

BJOG. 2020 Jan;127(2):182-192. doi: 10.1111/1471-0528.15981. Epub 2019 Nov 20.

PMID:
31749298
10.

Multiple-Ascending-Dose Phase 1 Clinical Study of the Safety, Tolerability, and Pharmacokinetics of CRS3123, a Narrow-Spectrum Agent with Minimal Disruption of Normal Gut Microbiota.

Lomeli BK, Galbraith H, Schettler J, Saviolakis GA, El-Amin W, Osborn B, Ravel J, Hazleton K, Lozupone CA, Evans RJ, Bell SJ, Ochsner UA, Jarvis TC, Baqar S, Janjic N.

Antimicrob Agents Chemother. 2019 Dec 20;64(1). pii: e01395-19. doi: 10.1128/AAC.01395-19. Print 2019 Dec 20.

11.

Chlamydia in adolescent/adult reproductive management trial study (CHARM): Clinical core protocol.

Mark KS, Brotman RM, Martinez-Greiwe S, Terplan M, Bavoil P, Ravel J.

Contemp Clin Trials Commun. 2019 Jul 19;16:100414. doi: 10.1016/j.conctc.2019.100414. eCollection 2019 Dec.

12.

Associations between dietary micronutrient intake and molecular-Bacterial Vaginosis.

Tuddenham S, Ghanem KG, Caulfield LE, Rovner AJ, Robinson C, Shivakoti R, Miller R, Burke A, Murphy C, Ravel J, Brotman RM.

Reprod Health. 2019 Oct 22;16(1):151. doi: 10.1186/s12978-019-0814-6.

13.

Nonoptimal Vaginal Microbiota After Azithromycin Treatment for Chlamydia trachomatis Infection.

Tamarelle J, Ma B, Gajer P, Humphrys MS, Terplan M, Mark KS, Thiébaut ACM, Forney LJ, Brotman RM, Delarocque-Astagneau E, Bavoil PM, Ravel J.

J Infect Dis. 2020 Feb 3;221(4):627-635. doi: 10.1093/infdis/jiz499.

PMID:
31573603
14.

The Vaginal Microbiota and Behavioral Factors Associated With Genital Candida albicans Detection in Reproductive-Age Women.

Brown SE, Schwartz JA, Robinson CK, OʼHanlon DE, Bradford LL, He X, Mark KS, Bruno VM, Ravel J, Brotman RM.

Sex Transm Dis. 2019 Nov;46(11):753-758. doi: 10.1097/OLQ.0000000000001066.

PMID:
31517769
15.

The Cervicovaginal Microbiota-Host Interaction Modulates Chlamydia trachomatis Infection.

Edwards VL, Smith SB, McComb EJ, Tamarelle J, Ma B, Humphrys MS, Gajer P, Gwilliam K, Schaefer AM, Lai SK, Terplan M, Mark KS, Brotman RM, Forney LJ, Bavoil PM, Ravel J.

mBio. 2019 Aug 13;10(4). pii: e01548-19. doi: 10.1128/mBio.01548-19.

16.

Crypt- and Mucosa-Associated Core Microbiotas in Humans and Their Alteration in Colon Cancer Patients.

Saffarian A, Mulet C, Regnault B, Amiot A, Tran-Van-Nhieu J, Ravel J, Sobhani I, Sansonetti PJ, Pédron T.

mBio. 2019 Jul 16;10(4). pii: e01315-19. doi: 10.1128/mBio.01315-19.

17.

Dynamics of Vaginal and Rectal Microbiota Over Several Menstrual Cycles in Female Cynomolgus Macaques.

Nugeyre MT, Tchitchek N, Adapen C, Cannou C, Contreras V, Benjelloun F, Ravel J, Le Grand R, Marlin R, Menu E.

Front Cell Infect Microbiol. 2019 Jun 12;9:188. doi: 10.3389/fcimb.2019.00188. eCollection 2019.

18.

Natural history, dynamics, and ecology of human papillomaviruses in genital infections of young women: protocol of the PAPCLEAR cohort study.

Murall CL, Rahmoun M, Selinger C, Baldellou M, Bernat C, Bonneau M, Boué V, Buisson M, Christophe G, D'Auria G, Taroni F, Foulongne V, Froissart R, Graf C, Grasset S, Groc S, Hirtz C, Jaussent A, Lajoie J, Lorcy F, Picot E, Picot MC, Ravel J, Reynes J, Rousset T, Seddiki A, Teirlinck M, Tribout V, Tuaillon É, Waterboer T, Jacobs N, Bravo IG, Segondy M, Boulle N, Alizon S.

BMJ Open. 2019 Jun 11;9(6):e025129. doi: 10.1136/bmjopen-2018-025129.

19.

Vaginal microbiota and mucosal pharmacokinetics of tenofovir in healthy women using tenofovir and tenofovir/levonorgestrel vaginal rings.

Thurman AR, Schwartz JL, Ravel J, Gajer P, Marzinke MA, Yousefieh N, Anderson SM, Doncel GF.

PLoS One. 2019 May 20;14(5):e0217229. doi: 10.1371/journal.pone.0217229. eCollection 2019.

20.

Mammographic breast density and its association with urinary estrogens and the fecal microbiota in postmenopausal women.

Jones GS, Spencer Feigelson H, Falk RT, Hua X, Ravel J, Yu G, Flores R, Gail MH, Shi J, Xu X, Goedert JJ.

PLoS One. 2019 May 8;14(5):e0216114. doi: 10.1371/journal.pone.0216114. eCollection 2019.

21.

Consent insufficient for data release-Response.

Amann RI, Baichoo S, Blencowe BJ, Bork P, Borodovsky M, Brooksbank C, Chain PSG, Colwell RR, Daffonchio DG, Danchin A, de Lorenzo V, Dorrestein PC, Finn RD, Fraser CM, Gilbert JA, Hallam SJ, Hugenholtz P, Ioannidis JPA, Jansson JK, Kim JF, Klenk HP, Klotz MG, Knight R, Konstantinidis KT, Kyrpides NC, Mason CE, McHardy AC, Meyer F, Ouzounis CA, Patrinos AAN, Podar M, Pollard KS, Ravel J, Muñoz AR, Roberts RJ, Rosselló-Móra R, Sansone SA, Schloss PD, Schriml LM, Setubal JC, Sorek R, Stevens RL, Tiedje JM, Turjanski A, Tyson GW, Ussery DW, Weinstock GM, White O, Whitman WB, Xenarios I.

Science. 2019 May 3;364(6439):446. doi: 10.1126/science.aax7509. No abstract available.

PMID:
31048484
22.

Cervicovaginal microbiota and local immune response modulate the risk of spontaneous preterm delivery.

Elovitz MA, Gajer P, Riis V, Brown AG, Humphrys MS, Holm JB, Ravel J.

Nat Commun. 2019 Mar 21;10(1):1305. doi: 10.1038/s41467-019-09285-9.

23.

Ultrahigh-Throughput Multiplexing and Sequencing of >500-Base-Pair Amplicon Regions on the Illumina HiSeq 2500 Platform.

Holm JB, Humphrys MS, Robinson CK, Settles ML, Ott S, Fu L, Yang H, Gajer P, He X, McComb E, Gravitt PE, Ghanem KG, Brotman RM, Ravel J.

mSystems. 2019 Feb 19;4(1). pii: e00029-19. doi: 10.1128/mSystems.00029-19. eCollection 2019 Jan-Feb.

24.

Complete Genome Sequence of Lactobacillus crispatus CO3MRSI1.

McComb E, Holm J, Ma B, Ravel J.

Microbiol Resour Announc. 2019 Jan 31;8(5). pii: e01538-18. doi: 10.1128/MRA.01538-18. eCollection 2019 Jan.

25.

Toward unrestricted use of public genomic data.

Amann RI, Baichoo S, Blencowe BJ, Bork P, Borodovsky M, Brooksbank C, Chain PSG, Colwell RR, Daffonchio DG, Danchin A, de Lorenzo V, Dorrestein PC, Finn RD, Fraser CM, Gilbert JA, Hallam SJ, Hugenholtz P, Ioannidis JPA, Jansson JK, Kim JF, Klenk HP, Klotz MG, Knight R, Konstantinidis KT, Kyrpides NC, Mason CE, McHardy AC, Meyer F, Ouzounis CA, Patrinos AAN, Podar M, Pollard KS, Ravel J, Muñoz AR, Roberts RJ, Rosselló-Móra R, Sansone SA, Schloss PD, Schriml LM, Setubal JC, Sorek R, Stevens RL, Tiedje JM, Turjanski A, Tyson GW, Ussery DW, Weinstock GM, White O, Whitman WB, Xenarios I.

Science. 2019 Jan 25;363(6425):350-352. doi: 10.1126/science.aaw1280. No abstract available.

PMID:
30679363
26.

The Evolving Facets of Bacterial Vaginosis: Implications for HIV Transmission.

McKinnon LR, Achilles SL, Bradshaw CS, Burgener A, Crucitti T, Fredricks DN, Jaspan HB, Kaul R, Kaushic C, Klatt N, Kwon DS, Marrazzo JM, Masson L, McClelland RS, Ravel J, van de Wijgert JHHM, Vodstrcil LA, Tachedjian G.

AIDS Res Hum Retroviruses. 2019 Mar;35(3):219-228. doi: 10.1089/AID.2018.0304.

27.

Host-targeted niclosamide inhibits C. difficile virulence and prevents disease in mice without disrupting the gut microbiota.

Tam J, Hamza T, Ma B, Chen K, Beilhartz GL, Ravel J, Feng H, Melnyk RA.

Nat Commun. 2018 Dec 7;9(1):5233. doi: 10.1038/s41467-018-07705-w.

28.

Microbial Biomarkers of Intestinal Barrier Maturation in Preterm Infants.

Ma B, McComb E, Gajer P, Yang H, Humphrys M, Okogbule-Wonodi AC, Fasano A, Ravel J, Viscardi RM.

Front Microbiol. 2018 Nov 14;9:2755. doi: 10.3389/fmicb.2018.02755. eCollection 2018.

29.

The Microbiome and Men's Health.

Platz EA, Liu CM, Michaud DS, Mueller NT, Ravel J.

Clin Chem. 2019 Jan;65(1):28-35. doi: 10.1373/clinchem.2018.287284. Epub 2018 Nov 20. No abstract available.

PMID:
30459165
30.

Impact of Standard Bacterial Vaginosis Treatment on the Genital Microbiota, Immune Milieu, and Ex Vivo Human Immunodeficiency Virus Susceptibility.

Joag V, Obila O, Gajer P, Scott MC, Dizzell S, Humphrys M, Shahabi K, Huibner S, Shannon B, Tharao W, Mureithi M, Oyugi J, Kimani J, Kaushic C, Ravel J, Anzala O, Kaul R.

Clin Infect Dis. 2019 May 2;68(10):1675-1683. doi: 10.1093/cid/ciy762.

31.

A high-throughput sequencing assay to comprehensively detect and characterize unicellular eukaryotes and helminths from biological and environmental samples.

Cannon MV, Bogale H, Rutt L, Humphrys M, Korpe P, Duggal P, Ravel J, Serre D.

Microbiome. 2018 Oct 29;6(1):195. doi: 10.1186/s40168-018-0581-6.

32.

Association between the vaginal microbiota, menopause status, and signs of vulvovaginal atrophy.

Brotman RM, Shardell MD, Gajer P, Fadrosh D, Chang K, Silver MI, Viscidi RP, Burke AE, Ravel J, Gravitt PE.

Menopause. 2018 Nov;25(11):1321-1330. doi: 10.1097/GME.0000000000001236.

PMID:
30358729
33.

The authors reply.

von Rosenvinge EC, Palumbo F, Ravel J, Rowthorn V, Hoffmann D.

Gut Microbes. 2019;10(2):113-114. doi: 10.1080/19490976.2018.1516980. Epub 2018 Oct 5.

34.

Anal Microbial Patterns and Oncogenic Human Papillomavirus in a Pilot Study of Nigerian Men Who Have Sex with Men at Risk for or Living with HIV.

Nowak RG, Bentzen SM, Ravel J, Crowell TA, Dauda W, Ma B, Liu H, Blattner WA, Baral SD, Charurat ME; TRUST/RV368 Study Group.

AIDS Res Hum Retroviruses. 2019 Mar;35(3):267-275. doi: 10.1089/AID.2018.0158. Epub 2018 Oct 17.

35.

Ruthenium(II) Polypyridyl Complexes as Photosensitizers for Antibacterial Photodynamic Therapy: A Structure-Activity Study on Clinical Bacterial Strains.

Le Gall T, Lemercier G, Chevreux S, Tücking KS, Ravel J, Thétiot F, Jonas U, Schönherr H, Montier T.

ChemMedChem. 2018 Oct 22;13(20):2229-2239. doi: 10.1002/cmdc.201800392. Epub 2018 Oct 9.

PMID:
30157309
36.

Cervicovaginal microbiota, women's health, and reproductive outcomes.

Kroon SJ, Ravel J, Huston WM.

Fertil Steril. 2018 Aug;110(3):327-336. doi: 10.1016/j.fertnstert.2018.06.036. Review.

PMID:
30098679
37.

Comparative phase I randomized open-label pilot clinical trial of Gynophilus® (Lcr regenerans®) immediate release capsules versus slow release muco-adhesive tablets.

Dausset C, Patrier S, Gajer P, Thoral C, Lenglet Y, Cardot JM, Judlin P, Ravel J, Nivoliez A.

Eur J Clin Microbiol Infect Dis. 2018 Oct;37(10):1869-1880. doi: 10.1007/s10096-018-3321-8. Epub 2018 Jul 21.

38.

Herpes simplex virus-binding IgG traps HSV in human cervicovaginal mucus across the menstrual cycle and diverse vaginal microbial composition.

Schroeder HA, Nunn KL, Schaefer A, Henry CE, Lam F, Pauly MH, Whaley KJ, Zeitlin L, Humphrys MS, Ravel J, Lai SK.

Mucosal Immunol. 2018 Sep;11(5):1477-1486. doi: 10.1038/s41385-018-0054-z. Epub 2018 Jul 9.

39.

Anti-HIV-1 Activity of Lactic Acid in Human Cervicovaginal Fluid.

Tyssen D, Wang YY, Hayward JA, Agius PA, DeLong K, Aldunate M, Ravel J, Moench TR, Cone RA, Tachedjian G.

mSphere. 2018 Jul 5;3(4). pii: e00055-18. doi: 10.1128/mSphere.00055-18.

40.

Impact of the griffithsin anti-HIV microbicide and placebo gels on the rectal mucosal proteome and microbiome in non-human primates.

Girard L, Birse K, Holm JB, Gajer P, Humphrys MS, Garber D, Guenthner P, Noël-Romas L, Abou M, McCorrister S, Westmacott G, Wang L, Rohan LC, Matoba N, McNicholl J, Palmer KE, Ravel J, Burgener AD.

Sci Rep. 2018 May 23;8(1):8059. doi: 10.1038/s41598-018-26313-8.

41.

The vaginal microbiota and its association with human papillomavirus, Chlamydia trachomatis, Neisseria gonorrhoeae and Mycoplasma genitalium infections: a systematic review and meta-analysis.

Tamarelle J, Thiébaut ACM, de Barbeyrac B, Bébéar C, Ravel J, Delarocque-Astagneau E.

Clin Microbiol Infect. 2019 Jan;25(1):35-47. doi: 10.1016/j.cmi.2018.04.019. Epub 2018 May 3.

42.

Application of Atlas of Cancer Signalling Network in preclinical studies.

Monraz Gomez LC, Kondratova M, Ravel JM, Barillot E, Zinovyev A, Kuperstein I.

Brief Bioinform. 2019 Mar 25;20(2):701-716. doi: 10.1093/bib/bby031. Review.

PMID:
29726961
43.

A Community-Level Initiative to Prevent Obesity: Results From Kaiser Permanente's Healthy Eating Active Living Zones Initiative in California.

Cheadle A, Atiedu A, Rauzon S, Schwartz PM, Keene L, Davoudi M, Spring R, Molina M, Lee L, Boyle K, Williamson D, Steimberg C, Tinajero R, Ravel J, Nudelman J, Azuma AM, Kuo ES, Solomon L.

Am J Prev Med. 2018 May;54(5 Suppl 2):S150-S159. doi: 10.1016/j.amepre.2018.01.024.

44.

Differential immune responses and microbiota profiles in children with autism spectrum disorders and co-morbid gastrointestinal symptoms.

Rose DR, Yang H, Serena G, Sturgeon C, Ma B, Careaga M, Hughes HK, Angkustsiri K, Rose M, Hertz-Picciotto I, Van de Water J, Hansen RL, Ravel J, Fasano A, Ashwood P.

Brain Behav Immun. 2018 May;70:354-368. doi: 10.1016/j.bbi.2018.03.025. Epub 2018 Mar 20.

45.

Higher Levels of a Cytotoxic Protein, Vaginolysin, in Lactobacillus-Deficient Community State Types at the Vaginal Mucosa.

Nowak RG, Randis TM, Desai P, He X, Robinson CK, Rath JM, Glover ED, Ratner AJ, Ravel J, Brotman RM.

Sex Transm Dis. 2018 Apr;45(4):e14-e17. doi: 10.1097/OLQ.0000000000000774.

46.

The implausible "in vivo" role of hydrogen peroxide as an antimicrobial factor produced by vaginal microbiota.

Tachedjian G, O'Hanlon DE, Ravel J.

Microbiome. 2018 Feb 6;6(1):29. doi: 10.1186/s40168-018-0418-3.

47.

Associations between sexual habits, menstrual hygiene practices, demographics and the vaginal microbiome as revealed by Bayesian network analysis.

Noyes N, Cho KC, Ravel J, Forney LJ, Abdo Z.

PLoS One. 2018 Jan 24;13(1):e0191625. doi: 10.1371/journal.pone.0191625. eCollection 2018.

48.

Postmenopausal breast cancer and oestrogen associations with the IgA-coated and IgA-noncoated faecal microbiota.

Goedert JJ, Hua X, Bielecka A, Okayasu I, Milne GL, Jones GS, Fujiwara M, Sinha R, Wan Y, Xu X, Ravel J, Shi J, Palm NW, Feigelson HS.

Br J Cancer. 2018 Feb 20;118(4):471-479. doi: 10.1038/bjc.2017.435. Epub 2018 Jan 23.

49.

Vaginal microbiota composition and association with prevalent Chlamydia trachomatis infection: a cross-sectional study of young women attending a STI clinic in France.

Tamarelle J, de Barbeyrac B, Le Hen I, Thiébaut A, Bébéar C, Ravel J, Delarocque-Astagneau E.

Sex Transm Infect. 2018 Dec;94(8):616-618. doi: 10.1136/sextrans-2017-053346. Epub 2018 Jan 22.

PMID:
29358524
50.

Cigarette smoking is associated with an altered vaginal tract metabolomic profile.

Nelson TM, Borgogna JC, Michalek RD, Roberts DW, Rath JM, Glover ED, Ravel J, Shardell MD, Yeoman CJ, Brotman RM.

Sci Rep. 2018 Jan 16;8(1):852. doi: 10.1038/s41598-017-14943-3.

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