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Items: 1 to 50 of 295

1.

Collagen turnover profiles in chronic kidney disease.

Rasmussen DGK, Boesby L, Nielsen SH, Tepel M, Birot S, Karsdal MA, Kamper AL, Genovese F.

Sci Rep. 2019 Nov 5;9(1):16062. doi: 10.1038/s41598-019-51905-3.

2.

Entry of bunyaviruses into plants and vectors.

Chen Y, Dessau M, Rotenberg D, Rasmussen DA, Whitfield AE.

Adv Virus Res. 2019;104:65-96. doi: 10.1016/bs.aivir.2019.07.001. Epub 2019 Aug 9.

PMID:
31439153
3.

Coupling adaptive molecular evolution to phylodynamics using fitness-dependent birth-death models.

Rasmussen DA, Stadler T.

Elife. 2019 Aug 15;8. pii: e45562. doi: 10.7554/eLife.45562.

4.

Beta-blocker choice and exchangeability in patients with heart failure and chronic obstructive pulmonary disease: an Italian register-based cohort study.

Sessa M, Mascolo A, Rasmussen DB, Kragholm K, Jensen MT, Sportiello L, Rafaniello C, Tari GM, Pagliaro C, Andersen M, Rossi F, Capuano A.

Sci Rep. 2019 Aug 7;9(1):11465. doi: 10.1038/s41598-019-47967-y.

5.

The cost of endoscopic treatment for walled-off pancreatic necrosis.

Neermark S, Rasmussen D, Rysgaard S, Gluud LL, Novovic S, Schmidt PN.

Pancreatology. 2019 Sep;19(6):828-833. doi: 10.1016/j.pan.2019.07.042. Epub 2019 Jul 30.

PMID:
31383574
6.

Markers of Collagen Formation and Degradation Reflect Renal Function and Predict Adverse Outcomes in Patients With Type 1 Diabetes.

Pilemann-Lyberg S, Rasmussen DGK, Hansen TW, Tofte N, Winther SA, Holm Nielsen S, Theilade S, Karsdal MA, Genovese F, Rossing P.

Diabetes Care. 2019 Sep;42(9):1760-1768. doi: 10.2337/dc18-2599. Epub 2019 Jul 1.

PMID:
31262950
7.

COPD exacerbations: the impact of long versus short courses of oral corticosteroids on mortality and pneumonia: nationwide data on 67 000 patients with COPD followed for 12 months.

Sivapalan P, Ingebrigtsen TS, Rasmussen DB, Sørensen R, Rasmussen CM, Jensen CB, Allin KH, Eklöf J, Seersholm N, Vestbo J, Jensen JS.

BMJ Open Respir Res. 2019 Mar 30;6(1):e000407. doi: 10.1136/bmjresp-2019-000407. eCollection 2019.

8.

Estimating Epidemic Incidence and Prevalence from Genomic Data.

Vaughan TG, Leventhal GE, Rasmussen DA, Drummond AJ, Welch D, Stadler T.

Mol Biol Evol. 2019 Aug 1;36(8):1804-1816. doi: 10.1093/molbev/msz106.

9.

NengoDL: Combining Deep Learning and Neuromorphic Modelling Methods.

Rasmussen D.

Neuroinformatics. 2019 Oct;17(4):611-628. doi: 10.1007/s12021-019-09424-z.

PMID:
30972529
10.

BEAST 2.5: An advanced software platform for Bayesian evolutionary analysis.

Bouckaert R, Vaughan TG, Barido-Sottani J, Duchêne S, Fourment M, Gavryushkina A, Heled J, Jones G, Kühnert D, De Maio N, Matschiner M, Mendes FK, Müller NF, Ogilvie HA, du Plessis L, Popinga A, Rambaut A, Rasmussen D, Siveroni I, Suchard MA, Wu CH, Xie D, Zhang C, Stadler T, Drummond AJ.

PLoS Comput Biol. 2019 Apr 8;15(4):e1006650. doi: 10.1371/journal.pcbi.1006650. eCollection 2019 Apr.

11.

Primitive Old World monkey from the earliest Miocene of Kenya and the evolution of cercopithecoid bilophodonty.

Rasmussen DT, Friscia AR, Gutierrez M, Kappelman J, Miller ER, Muteti S, Reynoso D, Rossie JB, Spell TL, Tabor NJ, Gierlowski-Kordesch E, Jacobs BF, Kyongo B, Macharwas M, Muchemi F.

Proc Natl Acad Sci U S A. 2019 Mar 26;116(13):6051-6056. doi: 10.1073/pnas.1815423116. Epub 2019 Mar 11. Erratum in: Proc Natl Acad Sci U S A. 2019 Jun 11;116(24):12109.

12.

A marker of type VI collagen formation (PRO-C6) is associated with higher arterial stiffness in type 1 diabetes.

Frimodt-Møller M, Hansen TW, Rasmussen DGK, Theilade S, Nielsen SH, Karsdal MA, Genovese F, Rossing P.

Acta Diabetol. 2019 Jun;56(6):711-712. doi: 10.1007/s00592-019-01306-9. Epub 2019 Mar 9. No abstract available.

PMID:
30852680
13.

Correction: Political instability and supply-side barriers undermine the potential for high participation in HIV testing for the prevention of mother-to-child transmission in Guinea-Bissau: A retrospective cross-sectional study.

Rasmussen DN, Unger HW, Bjerregaard-Andersen M, da Silva Té D, Vieira N, Oliveira I, Hønge BL, Jespersen S, Gomes MA, Aaby P, Wejse C, Sodemann M.

PLoS One. 2019 Feb 7;14(2):e0212240. doi: 10.1371/journal.pone.0212240. eCollection 2019.

14.

NIV for acute respiratory failure in COPD: high in-hospital mortality is determined by patient selection.

Hedsund C, Ankjærgaard KL, Rasmussen DB, Schwaner SH, Andreassen HF, Hansen EF, Wilcke JT.

Eur Clin Respir J. 2019 Jan 29;6(1):1571332. doi: 10.1080/20018525.2019.1571332. eCollection 2019.

15.

Beta-blocker, aspirin and statin usage after first-time myocardial infarction in patients with chronic obstructive pulmonary disease: a nationwide analysis from 1995 to 2015 in Denmark.

Rasmussen DB, Bodtger U, Lamberts M, Nicolaisen SK, Sessa M, Capuano A, Torp-Pedersen C, Gislason G, Lange P, Jensen MT.

Eur Heart J Qual Care Clin Outcomes. 2019 Jan 4. doi: 10.1093/ehjqcco/qcy063. [Epub ahead of print]

PMID:
30608575
16.

Tracking external introductions of HIV using phylodynamics reveals a major source of infections in rural KwaZulu-Natal, South Africa.

Rasmussen DA, Wilkinson E, Vandormael A, Tanser F, Pillay D, Stadler T, de Oliveira T.

Virus Evol. 2018 Dec 11;4(2):vey037. doi: 10.1093/ve/vey037. eCollection 2018 Jul.

17.

A non-invasive biomarker of type III collagen degradation reflects ischaemia reperfusion injury in rats.

Rasmussen DGK, Nielsen PM, Kasab-Oglo ÖY, Nielsen SH, Kierulf-Lassen C, Karsdal MA, Genovese F, Nørregaard R.

Nephrol Dial Transplant. 2018 Dec 7. doi: 10.1093/ndt/gfy345. [Epub ahead of print]

PMID:
30535162
18.

Quantitative conformational profiling of kinase inhibitors reveals origins of selectivity for Aurora kinase activation states.

Lake EW, Muretta JM, Thompson AR, Rasmussen DM, Majumdar A, Faber EB, Ruff EF, Thomas DD, Levinson NM.

Proc Natl Acad Sci U S A. 2018 Dec 18;115(51):E11894-E11903. doi: 10.1073/pnas.1811158115. Epub 2018 Dec 5.

19.

Comparison of Long-Term Clinical Implications of Beta-Blockade in Patients With Obstructive Airway Diseases Exposed to Beta-Blockers With Different β1-Adrenoreceptor Selectivity: An Italian Population-Based Cohort Study.

Sessa M, Mascolo A, Scavone C, Perone I, Di Giorgio A, Tari M, Fucile A, De Angelis A, Rasmussen DB, Jensen MT, Kragholm K, Rossi F, Capuano A, Sportiello L.

Front Pharmacol. 2018 Oct 25;9:1212. doi: 10.3389/fphar.2018.01212. eCollection 2018.

20.

The structure of DcrB, a lipoprotein from Salmonella enterica, reveals flexibility in the N-terminal segment of the Mog1p/PsbP-like fold.

Rasmussen DM, Soens RW, Davie TJ, Vaneerd CK, Bhattacharyya B, May JF.

J Struct Biol. 2018 Dec;204(3):513-518. doi: 10.1016/j.jsb.2018.10.005. Epub 2018 Oct 16.

PMID:
30339832
21.

Colorectal cancer screening use among insured adults: Is out-of-pocket cost a barrier to routine screening?

Perisetti A, Khan H, George NE, Yendala R, Rafiq A, Blakely S, Rasmussen D, Villalpando N, Goyal H.

World J Gastrointest Pharmacol Ther. 2018 Sep 5;9(4):31-38. doi: 10.4292/wjgpt.v9.i4.31.

22.

Assessment of liver fibrosis progression and regression by a serological collagen turnover profile.

Karsdal MA, Hjuler ST, Luo Y, Rasmussen DGK, Nielsen MJ, Holm Nielsen S, Leeming DJ, Goodman Z, Arch RH, Patel K, Schuppan D.

Am J Physiol Gastrointest Liver Physiol. 2019 Jan 1;316(1):G25-G31. doi: 10.1152/ajpgi.00158.2018. Epub 2018 Aug 30.

PMID:
30160980
23.

Political instability and supply-side barriers undermine the potential for high participation in HIV testing for the prevention of mother-to-child transmission in Guinea-Bissau: A retrospective cross-sectional study.

Rasmussen DN, Unger HW, Bjerregaard-Andersen M, da Silva Té D, Vieira N, Oliveira I, Hønge BL, Jespersen S, Gomes MA, Aaby P, Wejse C, Sodemann M.

PLoS One. 2018 Aug 1;13(8):e0199819. doi: 10.1371/journal.pone.0199819. eCollection 2018. Erratum in: PLoS One. 2019 Feb 7;14(2):e0212240.

24.

Fewer adverse effects associated with a modified two-bag intravenous acetylcysteine protocol compared to traditional three-bag regimen in paracetamol overdose.

Schmidt LE, Rasmussen DN, Petersen TS, Macias-Perez IM, Pavliv L, Kaelin B, Dart RC, Dalhoff K.

Clin Toxicol (Phila). 2018 Nov;56(11):1128-1134. doi: 10.1080/15563650.2018.1475672. Epub 2018 May 24.

PMID:
29792347
25.

MASCOT: parameter and state inference under the marginal structured coalescent approximation.

Müller NF, Rasmussen D, Stadler T.

Bioinformatics. 2018 Nov 15;34(22):3843-3848. doi: 10.1093/bioinformatics/bty406.

26.

Higher Collagen VI Formation Is Associated With All-Cause Mortality in Patients With Type 2 Diabetes and Microalbuminuria.

Rasmussen DGK, Hansen TW, von Scholten BJ, Nielsen SH, Reinhard H, Parving HH, Tepel M, Karsdal MA, Jacobsen PK, Genovese F, Rossing P.

Diabetes Care. 2018 Jul;41(7):1493-1500. doi: 10.2337/dc17-2392. Epub 2018 Apr 11.

PMID:
29643059
27.

Urinary endotrophin predicts disease progression in patients with chronic kidney disease.

Rasmussen DGK, Fenton A, Jesky M, Ferro C, Boor P, Tepel M, Karsdal MA, Genovese F, Cockwell P.

Sci Rep. 2017 Dec 11;7(1):17328. doi: 10.1038/s41598-017-17470-3.

28.

An integrated digital/clinical approach to smoking cessation in lung cancer screening: study protocol for a randomized controlled trial.

Graham AL, Burke MV, Jacobs MA, Cha S, Croghan IT, Schroeder DR, Moriarty JP, Borah BJ, Rasmussen DF, Brookover MJ, Suesse DB, Midthun DE, Hays JT.

Trials. 2017 Nov 28;18(1):568. doi: 10.1186/s13063-017-2312-x.

29.

Silicon Photonics Transmitter with SOA and Semiconductor Mode-Locked Laser.

Moscoso-Mártir A, Müller J, Hauck J, Chimot N, Setter R, Badihi A, Rasmussen DE, Garreau A, Nielsen M, Islamova E, Romero-García S, Shen B, Sandomirsky A, Rockman S, Li C, Sharif Azadeh S, Lo GQ, Mentovich E, Merget F, Lelarge F, Witzens J.

Sci Rep. 2017 Oct 24;7(1):13857. doi: 10.1038/s41598-017-14347-3.

30.

Awareness, attitudes and perceptions regarding HIV and PMTCT amongst pregnant women in Guinea-Bissau- a qualitative study.

Vieira N, Rasmussen DN, Oliveira I, Gomes A, Aaby P, Wejse C, Sodemann M, Reynolds L, Unger HW.

BMC Womens Health. 2017 Sep 4;17(1):71. doi: 10.1186/s12905-017-0427-6.

31.

A51 Dengue virus multi-strain models as hypotheses for serotype interaction.

Souto-Maior C, Rasmussen DA, De Freitas M, Gomes MGM.

Virus Evol. 2017 Mar 5;3(Suppl 1). pii: vew036.050. doi: 10.1093/ve/vew036.050. eCollection 2017 Mar. No abstract available.

32.

"Caught in a Generation Gap": A Generation Perspective on Refugees Getting Old in Denmark-A Qualitative Study.

Nielsen DS, Minet L, Zeraig L, Rasmussen DN, Sodemann M.

J Transcult Nurs. 2018 May;29(3):265-273. doi: 10.1177/1043659617718064. Epub 2017 Jul 8.

PMID:
28826349
33.

A neural model of hierarchical reinforcement learning.

Rasmussen D, Voelker A, Eliasmith C.

PLoS One. 2017 Jul 6;12(7):e0180234. doi: 10.1371/journal.pone.0180234. eCollection 2017.

34.

Taming the BEAST-A Community Teaching Material Resource for BEAST 2.

Barido-Sottani J, Bošková V, Plessis LD, Kühnert D, Magnus C, Mitov V, Müller NF, PecErska J, Rasmussen DA, Zhang C, Drummond AJ, Heath TA, Pybus OG, Vaughan TG, Stadler T.

Syst Biol. 2018 Jan 1;67(1):170-174. doi: 10.1093/sysbio/syx060.

35.

The Structured Coalescent and Its Approximations.

Müller NF, Rasmussen DA, Stadler T.

Mol Biol Evol. 2017 Nov 1;34(11):2970-2981. doi: 10.1093/molbev/msx186.

36.

Prevalence and correlation of cytokine-specific autoantibodies with epidemiological factors and C-reactive protein in 8,972 healthy individuals: Results from the Danish Blood Donor Study.

von Stemann JH, Rigas AS, Thørner LW, Rasmussen DGK, Pedersen OB, Rostgaard K, Erikstrup C, Ullum H, Hansen MB.

PLoS One. 2017 Jun 30;12(6):e0179981. doi: 10.1371/journal.pone.0179981. eCollection 2017.

37.

Estimating economic damage from climate change in the United States.

Hsiang S, Kopp R, Jina A, Rising J, Delgado M, Mohan S, Rasmussen DJ, Muir-Wood R, Wilson P, Oppenheimer M, Larsen K, Houser T.

Science. 2017 Jun 30;356(6345):1362-1369. doi: 10.1126/science.aal4369.

38.

Effect of overweight and obesity on weight loss and length of stay in patients with walled-off pancreatic necrosis.

Rysgaard S, Rasmussen D, Novovic S, Schmidt PN, Gluud LL.

Nutrition. 2017 Jun;38:109-112. doi: 10.1016/j.nut.2017.01.006. Epub 2017 Feb 3.

PMID:
28526375
39.

Older migrants in exile: the past holding hands with the present - a qualitative study.

Nielsen D, Minet L, Zeraiq L, Rasmussen DN, Sodemann M.

Scand J Caring Sci. 2017 Dec;31(4):1031-1038. doi: 10.1111/scs.12428. Epub 2017 Apr 24.

PMID:
28439912
40.

Phylodynamics on local sexual contact networks.

Rasmussen DA, Kouyos R, Günthard HF, Stadler T.

PLoS Comput Biol. 2017 Mar 28;13(3):e1005448. doi: 10.1371/journal.pcbi.1005448. eCollection 2017 Mar.

41.

Urinary collagen degradation products as early markers of progressive renal fibrosis.

Hijmans RS, Rasmussen DG, Yazdani S, Navis G, van Goor H, Karsdal MA, Genovese F, van den Born J.

J Transl Med. 2017 Mar 20;15(1):63. doi: 10.1186/s12967-017-1163-2.

42.

Evaluating and treating mammalian bites.

Rasmussen D, Landon A, Powell J, Brown GR.

JAAPA. 2017 Mar;30(3):32-36. doi: 10.1097/01.JAA.0000512233.61549.2b. Review.

PMID:
28221318
43.

Description and characterization of a unique human immunoglobulin G1 kappa idiotype found in placental tissue.

Scoville CD, Rasmussen D.

Placenta. 2017 Feb;50:84-93. doi: 10.1016/j.placenta.2016.12.027. Epub 2016 Dec 27.

PMID:
28161067
44.

Effects of prenatal low protein and postnatal high fat diets on visceral adipose tissue macrophage phenotypes and IL-6 expression in Sprague Dawley rat offspring.

Xie L, Zhang K, Rasmussen D, Wang J, Wu D, Roemmich JN, Bundy A, Johnson WT, Claycombe K.

PLoS One. 2017 Jan 31;12(1):e0169581. doi: 10.1371/journal.pone.0169581. eCollection 2017.

45.
46.

Phylogenetic Tools for Generalized HIV-1 Epidemics: Findings from the PANGEA-HIV Methods Comparison.

Ratmann O, Hodcroft EB, Pickles M, Cori A, Hall M, Lycett S, Colijn C, Dearlove B, Didelot X, Frost S, Hossain AS, Joy JB, Kendall M, Kühnert D, Leventhal GE, Liang R, Plazzotta G, Poon AF, Rasmussen DA, Stadler T, Volz E, Weis C, Leigh Brown AJ, Fraser C; PANGEA-HIV Consortium.

Mol Biol Evol. 2017 Jan;34(1):185-203. doi: 10.1093/molbev/msw217. Epub 2016 Oct 7.

47.

Prazosin Prevents Increased Anxiety Behavior That Occurs in Response to Stress During Alcohol Deprivations.

Rasmussen DD, Kincaid CL, Froehlich JC.

Alcohol Alcohol. 2017 Jan;52(1):5-11. doi: 10.1093/alcalc/agw082. Epub 2016 Oct 26.

48.

COPD: Mortality and Readmissions in Relation to Number of Admissions with Noninvasive Ventilation.

Ankjærgaard KL, Rasmussen DB, Schwaner SH, Andreassen HF, Hansen EF, Wilcke JT.

COPD. 2017 Feb;14(1):30-36. doi: 10.1080/15412555.2016.1181160. Epub 2016 Oct 10.

PMID:
27723369
49.

Health Care Infrastructure for Financially Sustainable Clinical Genomics.

Lennerz JK, McLaughlin HM, Baron JM, Rasmussen D, Sumbada Shin M, Berners-Lee N, Miller Batten J, Swoboda KJ, Gala MK, Winter HS, Schmahmann JD, Sweetser DA, Boswell M, Pacula M, Stenzinger A, Le LP, Hynes W, Rehm HL, Klibanski A, Black-Schaffer SW, Golden JA, Louis DN, Weiss ST, Iafrate AJ.

J Mol Diagn. 2016 Sep;18(5):697-706. doi: 10.1016/j.jmoldx.2016.04.003. Epub 2016 Jul 25.

50.

Origin, imports and exports of HIV-1 subtype C in South Africa: A historical perspective.

Wilkinson E, Rasmussen D, Ratmann O, Stadler T, Engelbrecht S, de Oliveira T.

Infect Genet Evol. 2016 Dec;46:200-208. doi: 10.1016/j.meegid.2016.07.008. Epub 2016 Jul 12.

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