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Items: 11

1.

Lying in Wait: Modeling the Control of Bacterial Infections via Antibiotic-Induced Proviruses.

Clifton SM, Kim T, Chandrashekhar JH, O'Toole GA, Rapti Z, Whitaker RJ.

mSystems. 2019 Oct 1;4(5). pii: e00221-19. doi: 10.1128/mSystems.00221-19.

2.

Indirect effects in a planktonic disease system.

Rapti Z, Stewart Merrill TE, Mueller-Brennan B, Kavouras JH, Cáceres CE.

Theor Popul Biol. 2019 Dec;130:132-142. doi: 10.1016/j.tpb.2019.07.009. Epub 2019 Jul 15.

PMID:
31319041
3.

Effects of Intrinsic and Extrinsic Host Mortality on Disease Spread.

Rapti Z, Cáceres CE.

Bull Math Biol. 2016 Feb;78(2):235-53. doi: 10.1007/s11538-016-0141-9. Epub 2016 Feb 8.

PMID:
26857380
4.

The Relationship between Gene Network Structure and Expression Variation among Individuals and Species.

Sears KE, Maier JA, Rivas-Astroza M, Poe R, Zhong S, Kosog K, Marcot JD, Behringer RR, Cretekos CJ, Rasweiler JJ 4th, Rapti Z.

PLoS Genet. 2015 Aug 28;11(8):e1005398. doi: 10.1371/journal.pgen.1005398. eCollection 2015 Aug.

5.

Effect of Larval Competition on Extrinsic Incubation Period and Vectorial Capacity of Aedes albopictus for Dengue Virus.

Bara J, Rapti Z, Cáceres CE, Muturi EJ.

PLoS One. 2015 May 7;10(5):e0126703. doi: 10.1371/journal.pone.0126703. eCollection 2015.

6.

Complex Daphnia interactions with parasites and competitors.

Cáceres CE, Davis G, Duple S, Hall SR, Koss A, Lee P, Rapti Z.

Math Biosci. 2014 Dec;258:148-61. doi: 10.1016/j.mbs.2014.10.002. Epub 2014 Oct 22.

PMID:
25445737
7.

Computing DNA duplex instability profiles efficiently with a two-state model: trends of promoters and binding sites.

Kantorovitz MR, Rapti Z, Gelev V, Usheva A.

BMC Bioinformatics. 2010 Dec 21;11:604. doi: 10.1186/1471-2105-11-604.

8.

Stationary solutions for a modified Peyrard-Bishop DNA model with up to third-neighbor interactions.

Rapti Z.

Eur Phys J E Soft Matter. 2010 Jun;32(2):209-16. doi: 10.1140/epje/i2010-10618-y. Epub 2010 Jun 17.

PMID:
20556463
9.

Profiling the thermodynamic softness of adenoviral promoters.

Choi CH, Rapti Z, Gelev V, Hacker MR, Alexandrov B, Park EJ, Park JS, Horikoshi N, Smerzi A, Rasmussen KØ, Bishop AR, Usheva A.

Biophys J. 2008 Jul;95(2):597-608. doi: 10.1529/biophysj.107.123471. Epub 2008 Apr 4.

10.

Healing length and bubble formation in DNA.

Rapti Z, Smerzi A, Rasmussen KO, Bishop AR, Choi CH, Usheva A.

Phys Rev E Stat Nonlin Soft Matter Phys. 2006 May;73(5 Pt 1):051902. Epub 2006 May 4.

PMID:
16802962
11.

Variational approach to the modulational instability.

Rapti Z, Kevrekidis PG, Smerzi A, Bishop AR.

Phys Rev E Stat Nonlin Soft Matter Phys. 2004 Jan;69(1 Pt 2):017601. Epub 2004 Jan 30.

PMID:
14995759

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