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Items: 18

1.

Multi-omic and multi-view clustering algorithms: review and cancer benchmark.

Rappoport N, Shamir R.

Nucleic Acids Res. 2018 Oct 8. doi: 10.1093/nar/gky889. [Epub ahead of print]

PMID:
30295871
2.

Spontaneous Changes in Ploidy Are Common in Yeast.

Harari Y, Ram Y, Rappoport N, Hadany L, Kupiec M.

Curr Biol. 2018 Mar 19;28(6):825-835.e4. doi: 10.1016/j.cub.2018.01.062. Epub 2018 Mar 1.

PMID:
29502947
3.

A genome-wide association study identifies only two ancestry specific variants associated with spontaneous preterm birth.

Rappoport N, Toung J, Hadley D, Wong RJ, Fujioka K, Reuter J, Abbott CW, Oh S, Hu D, Eng C, Huntsman S, Bodian DL, Niederhuber JE, Hong X, Zhang G, Sikora-Wohfeld W, Gignoux CR, Wang H, Oehlert J, Jelliffe-Pawlowski LL, Gould JB, Darmstadt GL, Wang X, Bustamante CD, Snyder MP, Ziv E, Patsopoulos NA, Muglia LJ, Burchard E, Shaw GM, O'Brodovich HM, Stevenson DK, Butte AJ, Sirota M.

Sci Rep. 2018 Jan 9;8(1):226. doi: 10.1038/s41598-017-18246-5.

4.

Overlooked Short Toxin-Like Proteins: A Shortcut to Drug Design.

Linial M, Rappoport N, Ofer D.

Toxins (Basel). 2017 Oct 29;9(11). pii: E350. doi: 10.3390/toxins9110350.

5.

[POST COLONOSCOPY AND POLYPECTOMY ENDOCARDITIS - A CASE CHALLENGING THE CURRENT AMERICAN GUIDELINES FOR ANTIMICROBIAL PROPHYLAXIS].

Rappoport N, Gotlieb N, Feld O, Livneh A.

Harefuah. 2016 Nov;155(11):650-652. Hebrew.

PMID:
28530064
6.

An expanded evaluation of protein function prediction methods shows an improvement in accuracy.

Jiang Y, Oron TR, Clark WT, Bankapur AR, D'Andrea D, Lepore R, Funk CS, Kahanda I, Verspoor KM, Ben-Hur A, Koo da CE, Penfold-Brown D, Shasha D, Youngs N, Bonneau R, Lin A, Sahraeian SM, Martelli PL, Profiti G, Casadio R, Cao R, Zhong Z, Cheng J, Altenhoff A, Skunca N, Dessimoz C, Dogan T, Hakala K, Kaewphan S, Mehryary F, Salakoski T, Ginter F, Fang H, Smithers B, Oates M, Gough J, Törönen P, Koskinen P, Holm L, Chen CT, Hsu WL, Bryson K, Cozzetto D, Minneci F, Jones DT, Chapman S, Bkc D, Khan IK, Kihara D, Ofer D, Rappoport N, Stern A, Cibrian-Uhalte E, Denny P, Foulger RE, Hieta R, Legge D, Lovering RC, Magrane M, Melidoni AN, Mutowo-Meullenet P, Pichler K, Shypitsyna A, Li B, Zakeri P, ElShal S, Tranchevent LC, Das S, Dawson NL, Lee D, Lees JG, Sillitoe I, Bhat P, Nepusz T, Romero AE, Sasidharan R, Yang H, Paccanaro A, Gillis J, Sedeño-Cortés AE, Pavlidis P, Feng S, Cejuela JM, Goldberg T, Hamp T, Richter L, Salamov A, Gabaldon T, Marcet-Houben M, Supek F, Gong Q, Ning W, Zhou Y, Tian W, Falda M, Fontana P, Lavezzo E, Toppo S, Ferrari C, Giollo M, Piovesan D, Tosatto SC, Del Pozo A, Fernández JM, Maietta P, Valencia A, Tress ML, Benso A, Di Carlo S, Politano G, Savino A, Rehman HU, Re M, Mesiti M, Valentini G, Bargsten JW, van Dijk AD, Gemovic B, Glisic S, Perovic V, Veljkovic V, Veljkovic N, Almeida-E-Silva DC, Vencio RZ, Sharan M, Vogel J, Kansakar L, Zhang S, Vucetic S, Wang Z, Sternberg MJ, Wass MN, Huntley RP, Martin MJ, O'Donovan C, Robinson PN, Moreau Y, Tramontano A, Babbitt PC, Brenner SE, Linial M, Orengo CA, Rost B, Greene CS, Mooney SD, Friedberg I, Radivojac P.

Genome Biol. 2016 Sep 7;17(1):184. doi: 10.1186/s13059-016-1037-6.

7.

Trends in genome dynamics among major orders of insects revealed through variations in protein families.

Rappoport N, Linial M.

BMC Genomics. 2015 Aug 7;16:583. doi: 10.1186/s12864-015-1771-2.

8.

ProtoBug: functional families from the complete proteomes of insects.

Rappoport N, Linial M.

Database (Oxford). 2015 Apr 24;2015:bau122. doi: 10.1093/database/bau122. Print 2015.

9.

Correlation between 'ACKR1/DARC null' polymorphism and benign neutropenia in Yemenite Jews.

Rappoport N, Simon AJ, Lev A, Yacobi M, Kaplinsky C, Weingarten M, Somech R, Amariglio N, Rechavi G.

Br J Haematol. 2015 Sep;170(6):892-5. doi: 10.1111/bjh.13345. Epub 2015 Mar 26. No abstract available.

PMID:
25817587
10.

Entropy-driven partitioning of the hierarchical protein space.

Rappoport N, Stern A, Linial N, Linial M.

Bioinformatics. 2014 Sep 1;30(17):i624-30. doi: 10.1093/bioinformatics/btu478.

11.

NeuroPID: a classifier of neuropeptide precursors.

Karsenty S, Rappoport N, Ofer D, Zair A, Linial M.

Nucleic Acids Res. 2014 Jul;42(Web Server issue):W182-6. doi: 10.1093/nar/gku363. Epub 2014 May 3.

12.

ProtoNet: charting the expanding universe of protein sequences.

Rappoport N, Linial N, Linial M.

Nat Biotechnol. 2013 Apr;31(4):290-2. doi: 10.1038/nbt.2553. No abstract available.

PMID:
23563419
13.

Functional inference by ProtoNet family tree: the uncharacterized proteome of Daphnia pulex.

Rappoport N, Linial M.

BMC Bioinformatics. 2013;14 Suppl 3:S11. doi: 10.1186/1471-2105-14-S3-S11. Epub 2013 Feb 28.

14.

Viral proteins acquired from a host converge to simplified domain architectures.

Rappoport N, Linial M.

PLoS Comput Biol. 2012 Feb;8(2):e1002364. doi: 10.1371/journal.pcbi.1002364. Epub 2012 Feb 2.

15.

ProtoNet 6.0: organizing 10 million protein sequences in a compact hierarchical family tree.

Rappoport N, Karsenty S, Stern A, Linial N, Linial M.

Nucleic Acids Res. 2012 Jan;40(Database issue):D313-20. doi: 10.1093/nar/gkr1027. Epub 2011 Nov 25.

16.

PANDORA: analysis of protein and peptide sets through the hierarchical integration of annotations.

Rappoport N, Fromer M, Schweiger R, Linial M.

Nucleic Acids Res. 2010 Jul;38(Web Server issue):W84-9. doi: 10.1093/nar/gkq320. Epub 2010 May 5.

17.

Fluctuating peroneal nerve palsy caused by an intraneural cyst.

Petit-Lacour MC, Pico F, Rappoport N, Gagey O, Said G.

J Neurol. 2002 Apr;249(4):490-1. No abstract available.

PMID:
11967662
18.

[Results of treatment of patients with trochanteric fractures of the femoral bone].

Iumashev GS, Kriukov BN, Rappoport NIa.

Sov Med. 1977 Mar;(3):37-41. Russian. No abstract available.

PMID:
867096

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