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Items: 1 to 50 of 153

1.

Inverting family GH156 sialidases define an unusual catalytic motif for glycosidase action.

Bule P, Chuzel L, Blagova E, Wu L, Gray MA, Henrissat B, Rapp E, Bertozzi CR, Taron CH, Davies GJ.

Nat Commun. 2019 Oct 23;10(1):4816. doi: 10.1038/s41467-019-12684-7.

2.

NIST Interlaboratory Study on Glycosylation Analysis of Monoclonal Antibodies: Comparison of Results from Diverse Analytical Methods.

De Leoz MLA, Duewer DL, Fung A, Liu L, Yau HK, Potter O, Staples GO, Furuki K, Frenkel R, Hu Y, Sosic Z, Zhang P, Altmann F, Gruber C, Shao C, Zaia J, Evers W, Pangelley S, Suckau D, Wiechmann A, Resemann A, Jabs W, Beck A, Froehlich JW, Huang C, Li Y, Liu Y, Sun S, Wang Y, Seo Y, An HJ, Reichardt NC, Ruiz JE, Archer-Hartmann S, Azadi P, Bell L, Lakos Z, An Y, Cipollo JF, Pučić-Baković M, Štambuk J, Lauc G, Li X, Wang PG, Bock A, Hennig R, Rapp E, Creskey M, Cyr T, Nakano M, Sugiyama T, Leung PA, Link-Lenczowski P, Jaworek J, Yang SJ, Zhang H, Kelly T, Klapoetke S, Cao R, Kim JY, Lee HK, Lee J, Yoo JS, Kim SR, Suh SK, de Haan N, Falck D, Lageveen-Kammeijer GSM, Wuhrer M, Emery RJ, Kozak RP, Liew LP, Royle L, Urbanowicz PA, Packer N, Song X, Everest-Dass A, Lattová E, Cajic S, Alagesan K, Kolarich D, Kasali T, Lindo V, Chen Y, Goswami K, Gau B, Amunugama R, Jones R, Stroop CJM, Kato K, Yagi H, Kondo S, Yuen CT, Harazono A, Shi X, Magnelli P, Kasper BT, Mahal LK, Harvey DJ, O'Flaherty RM, Rudd PM, Saldova R, Hecht ES, Muddiman DC, Kang J, Bhoskar P, Menard D, Saati A, Merle C, Mast S, Tep S, Truong J, Nishikaze T, Sekiya S, Shafer A, Funaoka S, Toyoda M, de Vreugd P, Caron C, Pradhan P, Tan NC, Mechref Y, Patil S, Rohrer JS, Chakrabarti R, Dadke D, Lahori M, Zou C, Cairo CW, Reiz B, Whittal RM, Lebrilla C, Wu LD, Guttman A, Szigeti M, Kremkow BG, Lee K, Sihlbom C, Adamczyk B, Jin C, Karlsson NG, Örnros J, Larson G, Nilsson J, Meyer B, Wiegandt A, Komatsu E, Perreault H, Bodnar ED, Said N, Francois YN, Leize-Wagner E, Maier S, Zeck A, Heck AJR, Yang Y, Haselberg R, Yu YQ, Alley W, Leone JW, Yuan H, Stein SE.

Mol Cell Proteomics. 2019 Oct 7. pii: mcp.RA119.001677. doi: 10.1074/mcp.RA119.001677. [Epub ahead of print]

3.

Enzymatic Cascades for Tailored 13C6 and 15N Enriched Human Milk Oligosaccharides.

Fischöder T, Cajic S, Grote V, Heinzler R, Reichl U, Franzreb M, Rapp E, Elling L.

Molecules. 2019 Sep 25;24(19). pii: E3482. doi: 10.3390/molecules24193482.

4.

Approach for Profiling of Glycosphingolipid Glycosylation by Multiplexed Capillary Gel Electrophoresis Coupled to Laser-Induced Fluorescence Detection To Identify Cell-Surface Markers of Human Pluripotent Stem Cells and Derived Cardiomyocytes.

Rossdam C, Konze SA, Oberbeck A, Rapp E, Gerardy-Schahn R, von Itzstein M, Buettner FFR.

Anal Chem. 2019 May 21;91(10):6413-6418. doi: 10.1021/acs.analchem.9b01114. Epub 2019 May 9.

PMID:
31058489
5.

Efficient influenza A virus production in high cell density using the novel porcine suspension cell line PBG.PK2.1.

Gränicher G, Coronel J, Pralow A, Marichal-Gallardo P, Wolff M, Rapp E, Karlas A, Sandig V, Genzel Y, Reichl U.

Vaccine. 2019 Nov 8;37(47):7019-7028. doi: 10.1016/j.vaccine.2019.04.030. Epub 2019 Apr 17.

6.

Post-Column Make-Up Flow (PCMF) Enhances the Performance of Capillary-Flow PGC-LC-MS/MS-Based Glycomics.

Hinneburg H, Chatterjee S, Schirmeister F, Nguyen-Khuong T, Packer NH, Rapp E, Thaysen-Andersen M.

Anal Chem. 2019 Apr 2;91(7):4559-4567. doi: 10.1021/acs.analchem.8b05720. Epub 2019 Mar 14.

PMID:
30810297
7.

The minimum information required for a glycomics experiment (MIRAGE) project: LC guidelines.

Campbell MP, Abrahams JL, Rapp E, Struwe WB, Costello CE, Novotny M, Ranzinger R, York WS, Kolarich D, Rudd PM, Kettner C.

Glycobiology. 2019 May 1;29(5):349-354. doi: 10.1093/glycob/cwz009.

PMID:
30778580
8.

Dr Yager and Colleagues Reply.

Yager J, Ganzini L, Nguyen DH, Rapp EK.

J Clin Psychiatry. 2018 Nov 27;79(6). pii: 18lr12566a. doi: 10.4088/JCP.18lr12566a. No abstract available.

PMID:
30549492
9.

Improvement of electrospray stability in negative ion mode for nano-PGC-LC-MS glycoanalysis via post-column make-up flow.

Nguyen-Khuong T, Pralow A, Reichl U, Rapp E.

Glycoconj J. 2018 Dec;35(6):499-509. doi: 10.1007/s10719-018-9848-1. Epub 2018 Nov 23.

PMID:
30467791
10.

The Fine Art of Destruction: A Guide to In-Depth Glycoproteomic Analyses-Exploiting the Diagnostic Potential of Fragment Ions.

Hoffmann M, Pioch M, Pralow A, Hennig R, Kottler R, Reichl U, Rapp E.

Proteomics. 2018 Dec;18(24):e1800282. doi: 10.1002/pmic.201800282.

PMID:
30427586
11.

Marijuana Use in the Era of Changing Cannabis Laws: What Are the Risks? Who is Most at Risk?

Stoecker WV, Rapp EE, Malters JM.

Mo Med. 2018 Sep-Oct;115(5):398-404. Review.

12.

The subcommissural organ and the Reissner fiber: old friends revisited.

Muñoz RI, Kähne T, Herrera H, Rodríguez S, Guerra MM, Vío K, Hennig R, Rapp E, Rodríguez E.

Cell Tissue Res. 2019 Feb;375(2):507-529. doi: 10.1007/s00441-018-2917-8. Epub 2018 Sep 26.

PMID:
30259139
13.

glyXtoolMS: An Open-Source Pipeline for Semiautomated Analysis of Glycopeptide Mass Spectrometry Data.

Pioch M, Hoffmann M, Pralow A, Reichl U, Rapp E.

Anal Chem. 2018 Oct 16;90(20):11908-11916. doi: 10.1021/acs.analchem.8b02087. Epub 2018 Sep 25.

PMID:
30252445
14.

Functional metagenomics identifies an exosialidase with an inverting catalytic mechanism that defines a new glycoside hydrolase family (GH156).

Chuzel L, Ganatra MB, Rapp E, Henrissat B, Taron CH.

J Biol Chem. 2018 Nov 23;293(47):18138-18150. doi: 10.1074/jbc.RA118.003302. Epub 2018 Sep 24.

15.

High-throughput Serum N-Glycomics: Method Comparison and Application to Study Rheumatoid Arthritis and Pregnancy-associated Changes.

Reiding KR, Bondt A, Hennig R, Gardner RA, O'Flaherty R, Trbojević-Akmačić I, Shubhakar A, Hazes JMW, Reichl U, Fernandes DL, Pučić-Baković M, Rapp E, Spencer DIR, Dolhain RJEM, Rudd PM, Lauc G, Wuhrer M.

Mol Cell Proteomics. 2019 Jan;18(1):3-15. doi: 10.1074/mcp.RA117.000454. Epub 2018 Sep 21.

PMID:
30242110
16.

Enzymatic Cascade Synthesis Provides Novel Linear Human Milk Oligosaccharides as Reference Standards for xCGE-LIF Based High-Throughput Analysis.

Fischöder T, Cajic S, Reichl U, Rapp E, Elling L.

Biotechnol J. 2019 Mar;14(3):e1800305. doi: 10.1002/biot.201800305. Epub 2018 Aug 23.

PMID:
30076755
17.

Establishment of a five-enzyme cell-free cascade for the synthesis of uridine diphosphate N-acetylglucosamine.

Mahour R, Klapproth J, Rexer TFT, Schildbach A, Klamt S, Pietzsch M, Rapp E, Reichl U.

J Biotechnol. 2018 Oct 10;283:120-129. doi: 10.1016/j.jbiotec.2018.07.027. Epub 2018 Jul 22.

PMID:
30044949
18.

Working With Decisionally Capable Patients Who Are Determined to End Their Own Lives.

Yager J, Ganzini L, Nguyen DH, Rapp EK.

J Clin Psychiatry. 2018 May 22;79(4). pii: 17r11767. doi: 10.4088/JCP.17r11767.

PMID:
29873952
19.

Plasma N-Glycan Signatures Are Associated With Features of Inflammatory Bowel Diseases.

Clerc F, Novokmet M, Dotz V, Reiding KR, de Haan N, Kammeijer GSM, Dalebout H, Bladergroen MR, Vukovic F, Rapp E; IBD-BIOM Consortium, Targan SR, Barron G, Manetti N, Latiano A, McGovern DPB, Annese V, Lauc G, Wuhrer M.

Gastroenterology. 2018 Sep;155(3):829-843. doi: 10.1053/j.gastro.2018.05.030. Epub 2018 May 21.

PMID:
29792883
20.

Malaria infection in mosquitoes decreases the personal protection offered by permethrin-treated bednets.

Thiévent K, Hofer L, Rapp E, Tambwe MM, Moore S, Koella JC.

Parasit Vectors. 2018 May 4;11(1):284. doi: 10.1186/s13071-018-2846-0.

21.

Alterations of the Human Skin N- and O-Glycome in Basal Cell Carcinoma and Squamous Cell Carcinoma.

Möginger U, Grunewald S, Hennig R, Kuo CW, Schirmeister F, Voth H, Rapp E, Khoo KH, Seeberger PH, Simon JC, Kolarich D.

Front Oncol. 2018 Mar 21;8:70. doi: 10.3389/fonc.2018.00070. eCollection 2018.

22.

Detection of carbapenemases with a newly developed commercial assay using Matrix Assisted Laser Desorption Ionization-Time of Flight.

Rapp E, Samuelsen Ø, Sundqvist M.

J Microbiol Methods. 2018 Mar;146:37-39. doi: 10.1016/j.mimet.2018.01.008. Epub 2018 Feb 3.

23.

MPA Portable: A Stand-Alone Software Package for Analyzing Metaproteome Samples on the Go.

Muth T, Kohrs F, Heyer R, Benndorf D, Rapp E, Reichl U, Martens L, Renard BY.

Anal Chem. 2018 Jan 2;90(1):685-689. doi: 10.1021/acs.analchem.7b03544. Epub 2017 Dec 19.

24.

One pot synthesis of GDP-mannose by a multi-enzyme cascade for enzymatic assembly of lipid-linked oligosaccharides.

Rexer TFT, Schildbach A, Klapproth J, Schierhorn A, Mahour R, Pietzsch M, Rapp E, Reichl U.

Biotechnol Bioeng. 2018 Jan;115(1):192-205. doi: 10.1002/bit.26454. Epub 2017 Oct 23.

25.

Improvement of the glycoproteomic toolbox with the discovery of a unique C-terminal cleavage specificity of flavastacin for N-glycosylated asparagine.

Pralow A, Hoffmann M, Nguyen-Khuong T, Rapp E, Reichl U.

Sci Rep. 2017 Sep 12;7(1):11419. doi: 10.1038/s41598-017-11668-1.

26.

A comparison of two non-invasive methods for measuring scapular orientation in functional positions.

Rapp EA, Richardson RT, Russo SA, Rose WC, Richards JG.

J Biomech. 2017 Aug 16;61:269-274. doi: 10.1016/j.jbiomech.2017.07.032. Epub 2017 Aug 10.

PMID:
28823505
27.

T2*-Weighted and Diffusion Magnetic Resonance Imaging Differentiation of Cerebral Fat Embolism From Diffuse Axonal Injury.

Rutman AM, Rapp EJ, Hippe DS, Vu B, Mossa-Basha M.

J Comput Assist Tomogr. 2017 Nov/Dec;41(6):877-883. doi: 10.1097/RCT.0000000000000635.

PMID:
28708729
28.

Errors Associated With Utilizing Prescribed Scapular Kinematics to Estimate Unconstrained, Natural Upper Extremity Motion in Musculoskeletal Modeling.

Richardson RT, Rapp EA, Quinton RG, Nicholson KF, Knarr BA, Russo SA, Higginson JS, Richards JG.

J Appl Biomech. 2017 Dec 1;33(6):469-473. doi: 10.1123/jab.2016-0346. Epub 2017 Oct 30.

29.

Acrylfentanyl: Another new psychoactive drug with fatal consequences.

Guerrieri D, Rapp E, Roman M, Thelander G, Kronstrand R.

Forensic Sci Int. 2017 Aug;277:e21-e29. doi: 10.1016/j.forsciint.2017.05.010. Epub 2017 May 22.

PMID:
28587915
30.

Quantitative Assessment of Sialo-Glycoproteins and N-Glycans during Cardiomyogenic Differentiation of Human Induced Pluripotent Stem Cells.

Konze SA, Cajic S, Oberbeck A, Hennig R, Pich A, Rapp E, Buettner FFR.

Chembiochem. 2017 Jul 4;18(13):1317-1331. doi: 10.1002/cbic.201700100. Epub 2017 Jun 13.

PMID:
28509371
31.

Sialylation Is Dispensable for Early Murine Embryonic Development in Vitro.

Abeln M, Borst KM, Cajic S, Thiesler H, Kats E, Albers I, Kuhn M, Kaever V, Rapp E, Münster-Kühnel A, Weinhold B.

Chembiochem. 2017 Jul 4;18(13):1305-1316. doi: 10.1002/cbic.201700083. Epub 2017 May 11.

32.

Validation of a mathematical approach to estimate dynamic scapular orientation.

Nicholson KF, Richardson RT, Rapp EA, Quinton RG, Anzilotti KF, Richards JG.

J Biomech. 2017 Mar 21;54:101-105. doi: 10.1016/j.jbiomech.2017.01.025. Epub 2017 Jan 31.

PMID:
28233555
33.

Proteotyping of laboratory-scale biogas plants reveals multiple steady-states in community composition.

Kohrs F, Heyer R, Bissinger T, Kottler R, Schallert K, Püttker S, Behne A, Rapp E, Benndorf D, Reichl U.

Anaerobe. 2017 Aug;46:56-68. doi: 10.1016/j.anaerobe.2017.02.005. Epub 2017 Feb 9.

PMID:
28189830
34.

Postmortem and Toxicological Findings in a Series of Furanylfentanyl-Related Deaths.

Guerrieri D, Rapp E, Roman M, Druid H, Kronstrand R.

J Anal Toxicol. 2017 Apr 1;41(3):242-249. doi: 10.1093/jat/bkw129.

PMID:
28096302
35.

The minimum information required for a glycomics experiment (MIRAGE) project: improving the standards for reporting glycan microarray-based data.

Liu Y, McBride R, Stoll M, Palma AS, Silva L, Agravat S, Aoki-Kinoshita KF, Campbell MP, Costello CE, Dell A, Haslam SM, Karlsson NG, Khoo KH, Kolarich D, Novotny MV, Packer NH, Ranzinger R, Rapp E, Rudd PM, Struwe WB, Tiemeyer M, Wells L, York WS, Zaia J, Kettner C, Paulson JC, Feizi T, Smith DF.

Glycobiology. 2016 Nov 22. [Epub ahead of print]

36.

Tandem Mass Spectrum Sequencing: An Alternative to Database Search Engines in Shotgun Proteomics.

Muth T, Rapp E, Berven FS, Barsnes H, Vaudel M.

Adv Exp Med Biol. 2016;919:217-226. Review.

PMID:
27975219
37.

Bilateral carpal tunnel surgery in one operation: Retrospective study.

Herisson O, Dury M, Rapp E, Marin-Braun F.

Hand Surg Rehabil. 2016 Jun;35(3):199-202. doi: 10.1016/j.hansur.2015.12.012. Epub 2016 Mar 22.

PMID:
27740462
38.

The impact of sequence database choice on metaproteomic results in gut microbiota studies.

Tanca A, Palomba A, Fraumene C, Pagnozzi D, Manghina V, Deligios M, Muth T, Rapp E, Martens L, Addis MF, Uzzau S.

Microbiome. 2016 Sep 27;4(1):51.

39.

The minimum information required for a glycomics experiment (MIRAGE) project: sample preparation guidelines for reliable reporting of glycomics datasets.

Struwe WB, Agravat S, Aoki-Kinoshita KF, Campbell MP, Costello CE, Dell A, Ten Feizi, Haslam SM, Karlsson NG, Khoo KH, Kolarich D, Liu Y, McBride R, Novotny MV, Packer NH, Paulson JC, Rapp E, Ranzinger R, Rudd PM, Smith DF, Tiemeyer M, Wells L, York WS, Zaia J, Kettner C.

Glycobiology. 2016 Sep;26(9):907-910. Epub 2016 Sep 21.

40.

Ezrin and HNRNP expression correlate with increased virus release rate and early onset of virus-induced apoptosis of MDCK suspension cells.

Kluge S, Genzel Y, Laus K, Serve A, Pflugmacher A, Peschel B, Rapp E, Reichl U.

Biotechnol J. 2016 Oct;11(10):1332-1342. doi: 10.1002/biot.201600384.

PMID:
27581796
41.

Proteotyping of biogas plant microbiomes separates biogas plants according to process temperature and reactor type.

Heyer R, Benndorf D, Kohrs F, De Vrieze J, Boon N, Hoffmann M, Rapp E, Schlüter A, Sczyrba A, Reichl U.

Biotechnol Biofuels. 2016 Jul 26;9:155. doi: 10.1186/s13068-016-0572-4. eCollection 2016.

42.

Towards personalized diagnostics via longitudinal study of the human plasma N-glycome.

Hennig R, Cajic S, Borowiak M, Hoffmann M, Kottler R, Reichl U, Rapp E.

Biochim Biophys Acta. 2016 Aug;1860(8):1728-38. doi: 10.1016/j.bbagen.2016.03.035. Epub 2016 Mar 31.

43.

A comparison of acromion marker cluster calibration methods for estimating scapular kinematics during upper extremity ergometry.

Richardson RT, Nicholson KF, Rapp EA, Johnston TE, Richards JG.

J Biomech. 2016 May 3;49(7):1255-1258. doi: 10.1016/j.jbiomech.2016.02.052. Epub 2016 Mar 4.

PMID:
26976228
44.

Sialic acid-specific affinity chromatography for the separation of erythropoietin glycoforms using serotonin as a ligand.

Meininger M, Stepath M, Hennig R, Cajic S, Rapp E, Rotering H, Wolff MW, Reichl U.

J Chromatogr B Analyt Technol Biomed Life Sci. 2016 Feb 15;1012-1013:193-203. doi: 10.1016/j.jchromb.2016.01.005. Epub 2016 Jan 11.

45.

Glycomic Characterization of Induced Pluripotent Stem Cells Derived from a Patient Suffering from Phosphomannomutase 2 Congenital Disorder of Glycosylation (PMM2-CDG).

Thiesler CT, Cajic S, Hoffmann D, Thiel C, van Diepen L, Hennig R, Sgodda M, Weiβmann R, Reichl U, Steinemann D, Diekmann U, Huber NM, Oberbeck A, Cantz T, Kuss AW, Körner C, Schambach A, Rapp E, Buettner FF.

Mol Cell Proteomics. 2016 Apr;15(4):1435-52. doi: 10.1074/mcp.M115.054122. Epub 2016 Jan 19.

46.

Site-specific O-Glycosylation Analysis of Human Blood Plasma Proteins.

Hoffmann M, Marx K, Reichl U, Wuhrer M, Rapp E.

Mol Cell Proteomics. 2016 Feb;15(2):624-41. doi: 10.1074/mcp.M115.053546. Epub 2015 Nov 23.

47.

Is phosphorylated tau unique to chronic traumatic encephalopathy? Phosphorylated tau in epileptic brain and chronic traumatic encephalopathy.

Puvenna V, Engeler M, Banjara M, Brennan C, Schreiber P, Dadas A, Bahrami A, Solanki J, Bandyopadhyay A, Morris JK, Bernick C, Ghosh C, Rapp E, Bazarian JJ, Janigro D.

Brain Res. 2016 Jan 1;1630:225-40. doi: 10.1016/j.brainres.2015.11.007. Epub 2015 Nov 7.

48.

Comparison of Influenza Virus Particle Purification Using Magnetic Sulfated Cellulose Particles with an Established Centrifugation Method for Analytics.

Serve A, Pieler MM, Benndorf D, Rapp E, Wolff MW, Reichl U.

Anal Chem. 2015 Nov 3;87(21):10708-11. doi: 10.1021/acs.analchem.5b02681. Epub 2015 Oct 14.

PMID:
26447768
49.

Exclusive Decoration of Simian Immunodeficiency Virus Env with High-Mannose Type N-Glycans Is Not Compatible with Mucosal Transmission in Rhesus Macaques.

Karsten CB, Buettner FF, Cajic S, Nehlmeier I, Neumann B, Klippert A, Sauermann U, Reichl U, Gerardy-Schahn R, Rapp E, Stahl-Hennig C, Pöhlmann S.

J Virol. 2015 Nov;89(22):11727-33. doi: 10.1128/JVI.01358-15. Epub 2015 Sep 9.

50.

Colonic metaproteomic signatures of active bacteria and the host in obesity.

Kolmeder CA, Ritari J, Verdam FJ, Muth T, Keskitalo S, Varjosalo M, Fuentes S, Greve JW, Buurman WA, Reichl U, Rapp E, Martens L, Palva A, Salonen A, Rensen SS, de Vos WM.

Proteomics. 2015 Oct;15(20):3544-52. doi: 10.1002/pmic.201500049. Epub 2015 Sep 11.

PMID:
26255997

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