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Best matches for Rappé MS[au]:

Viruses in the Oceanic Basement. Nigro OD et al. MBio. (2017)

The uncultured microbial majority. Rappé MS et al. Annu Rev Microbiol. (2003)

Metagenome sequencing and 98 microbial genomes from Juan de Fuca Ridge flank subsurface fluids. Jungbluth SP et al. Sci Data. (2017)

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Items: 1 to 50 of 51

1.

Elemental Composition, Phosphorous Uptake, and Characteristics of Growth of a SAR11 Strain in Batch and Continuous Culture.

Grant SR, Church MJ, Ferrón S, Laws EA, Rappé MS.

mSystems. 2019 May 21;4(4). pii: e00218-18. doi: 10.1128/mSystems.00218-18.

2.

Carboxydotrophy potential of uncultivated Hydrothermarchaeota from the subseafloor crustal biosphere.

Carr SA, Jungbluth SP, Eloe-Fadrosh EA, Stepanauskas R, Woyke T, Rappé MS, Orcutt BN.

ISME J. 2019 Jun;13(6):1457-1468. doi: 10.1038/s41396-019-0352-9. Epub 2019 Feb 7.

PMID:
30728468
3.

Divergent methyl-coenzyme M reductase genes in a deep-subseafloor Archaeoglobi.

Boyd JA, Jungbluth SP, Leu AO, Evans PN, Woodcroft BJ, Chadwick GL, Orphan VJ, Amend JP, Rappé MS, Tyson GW.

ISME J. 2019 May;13(5):1269-1279. doi: 10.1038/s41396-018-0343-2. Epub 2019 Jan 16.

4.

The importance of designating type material for uncultured taxa.

Chuvochina M, Rinke C, Parks DH, Rappé MS, Tyson GW, Yilmaz P, Whitman WB, Hugenholtz P.

Syst Appl Microbiol. 2019 Jan;42(1):15-21. doi: 10.1016/j.syapm.2018.07.003. Epub 2018 Jul 18.

5.

Author Correction: Nitrogen-fixing populations of Planctomycetes and Proteobacteria are abundant in surface ocean metagenomes.

Delmont TO, Quince C, Shaiber A, Esen ÖC, Lee ST, Rappé MS, McLellan SL, Lücker S, Eren AM.

Nat Microbiol. 2018 Aug;3(8):963. doi: 10.1038/s41564-018-0209-4.

PMID:
30042441
6.

Nitrogen-fixing populations of Planctomycetes and Proteobacteria are abundant in surface ocean metagenomes.

Delmont TO, Quince C, Shaiber A, Esen ÖC, Lee ST, Rappé MS, McLellan SL, Lücker S, Eren AM.

Nat Microbiol. 2018 Jul;3(7):804-813. doi: 10.1038/s41564-018-0176-9. Epub 2018 Jun 11. Erratum in: Nat Microbiol. 2018 Aug;3(8):963.

PMID:
29891866
7.

Expanded diversity of microbial groups that shape the dissimilatory sulfur cycle.

Anantharaman K, Hausmann B, Jungbluth SP, Kantor RS, Lavy A, Warren LA, Rappé MS, Pester M, Loy A, Thomas BC, Banfield JF.

ISME J. 2018 Jun;12(7):1715-1728. doi: 10.1038/s41396-018-0078-0. Epub 2018 Feb 21.

8.

Corrigendum: Metagenome sequencing and 98 microbial genomes from Juan de Fuca Ridge flank subsurface fluids.

Jungbluth SP, Amend JP, Rappé MS.

Sci Data. 2017 Jul 4;4:170080. doi: 10.1038/sdata.2017.80.

9.

Genomic comparisons of a bacterial lineage that inhabits both marine and terrestrial deep subsurface systems.

Jungbluth SP, Glavina Del Rio T, Tringe SG, Stepanauskas R, Rappé MS.

PeerJ. 2017 Apr 6;5:e3134. doi: 10.7717/peerj.3134. eCollection 2017.

10.

Metagenome sequencing and 98 microbial genomes from Juan de Fuca Ridge flank subsurface fluids.

Jungbluth SP, Amend JP, Rappé MS.

Sci Data. 2017 Mar 28;4:170037. doi: 10.1038/sdata.2017.37. Erratum in: Sci Data. 2017 Jul 04;4:170080.

11.

Viruses in the Oceanic Basement.

Nigro OD, Jungbluth SP, Lin HT, Hsieh CC, Miranda JA, Schvarcz CR, Rappé MS, Steward GF.

MBio. 2017 Mar 7;8(2). pii: e02129-16. doi: 10.1128/mBio.02129-16.

12.

Biogeography of planktonic and coral-associated microorganisms across the Hawaiian Archipelago.

Salerno JL, Bowen BW, Rappé MS.

FEMS Microbiol Ecol. 2016 Aug;92(8). pii: fiw109. doi: 10.1093/femsec/fiw109. Epub 2016 May 23.

PMID:
27222221
13.

Nanocalorimetric Characterization of Microbial Activity in Deep Subsurface Oceanic Crustal Fluids.

Robador A, LaRowe DE, Jungbluth SP, Lin HT, Rappé MS, Nealson KH, Amend JP.

Front Microbiol. 2016 Apr 5;7:454. doi: 10.3389/fmicb.2016.00454. eCollection 2016.

14.

Novel microbial assemblages inhabiting crustal fluids within mid-ocean ridge flank subsurface basalt.

Jungbluth SP, Bowers RM, Lin HT, Cowen JP, Rappé MS.

ISME J. 2016 Aug;10(8):2033-47. doi: 10.1038/ismej.2015.248. Epub 2016 Feb 12.

15.

Needles in the blue sea: sub-species specificity in targeted protein biomarker analyses within the vast oceanic microbial metaproteome.

Saito MA, Dorsk A, Post AF, McIlvin MR, Rappé MS, DiTullio GR, Moran DM.

Proteomics. 2015 Oct;15(20):3521-31. doi: 10.1002/pmic.201400630. Epub 2015 Jul 22.

PMID:
26097212
16.

Activity and phylogenetic diversity of sulfate-reducing microorganisms in low-temperature subsurface fluids within the upper oceanic crust.

Robador A, Jungbluth SP, LaRowe DE, Bowers RM, Rappé MS, Amend JP, Cowen JP.

Front Microbiol. 2015 Jan 14;5:748. doi: 10.3389/fmicb.2014.00748. eCollection 2014.

17.

Draft genome sequence of marine alphaproteobacterial strain HIMB11, the first cultivated representative of a unique lineage within the Roseobacter clade possessing an unusually small genome.

Durham BP, Grote J, Whittaker KA, Bender SJ, Luo H, Grim SL, Brown JM, Casey JR, Dron A, Florez-Leiva L, Krupke A, Luria CM, Mine AH, Nigro OD, Pather S, Talarmin A, Wear EK, Weber TS, Wilson JM, Church MJ, DeLong EF, Karl DM, Steward GF, Eppley JM, Kyrpides NC, Schuster S, Rappé MS.

Stand Genomic Sci. 2014 Mar 15;9(3):632-45. doi: 10.4056/sigs.4998989. eCollection 2014 Jun 15.

18.

Phylogenetic diversity of microorganisms in subseafloor crustal fluids from Holes 1025C and 1026B along the Juan de Fuca Ridge flank.

Jungbluth SP, Lin HT, Cowen JP, Glazer BT, Rappé MS.

Front Microbiol. 2014 Mar 25;5:119. doi: 10.3389/fmicb.2014.00119. eCollection 2014.

19.

Stabilizing the foundation of the house that 'omics builds: the evolving value of cultured isolates to marine microbiology.

Rappé MS.

Curr Opin Microbiol. 2013 Oct;16(5):618-24. doi: 10.1016/j.mib.2013.09.009. Epub 2013 Oct 29. Review.

PMID:
24182948
20.

Coastal bacterioplankton community dynamics in response to a natural disturbance.

Yeo SK, Huggett MJ, Eiler A, Rappé MS.

PLoS One. 2013;8(2):e56207. doi: 10.1371/journal.pone.0056207. Epub 2013 Feb 7.

21.

Streamlining and core genome conservation among highly divergent members of the SAR11 clade.

Grote J, Thrash JC, Huggett MJ, Landry ZC, Carini P, Giovannoni SJ, Rappé MS.

MBio. 2012 Sep 18;3(5). pii: e00252-12. doi: 10.1128/mBio.00252-12. Print 2012.

22.

Specificity of associations between bacteria and the coral Pocillopora meandrina during early development.

Apprill A, Marlow HQ, Martindale MQ, Rappé MS.

Appl Environ Microbiol. 2012 Oct;78(20):7467-75. Epub 2012 Aug 17.

23.

Microbial diversity within basement fluids of the sediment-buried Juan de Fuca Ridge flank.

Jungbluth SP, Grote J, Lin HT, Cowen JP, Rappé MS.

ISME J. 2013 Jan;7(1):161-72. doi: 10.1038/ismej.2012.73. Epub 2012 Jul 12.

24.

Genome sequence of strain HIMB624, a cultured representative from the OM43 clade of marine Betaproteobacteria.

Huggett MJ, Hayakawa DH, Rappé MS.

Stand Genomic Sci. 2012 Mar 19;6(1):11-20. doi: 10.4056/sigs.2305090. Epub 2012 Mar 3. No abstract available.

25.

Draft genome sequence of strain HIMB100, a cultured representative of the SAR116 clade of marine Alphaproteobacteria.

Grote J, Bayindirli C, Bergauer K, Carpintero de Moraes P, Chen H, D'Ambrosio L, Edwards B, Fernández-Gómez B, Hamisi M, Logares R, Nguyen D, Rii YM, Saeck E, Schutte C, Widner B, Church MJ, Steward GF, Karl DM, Delong EF, Eppley JM, Schuster SC, Kyrpides NC, Rappé MS.

Stand Genomic Sci. 2011 Dec 31;5(3):269-78. doi: 10.4056/sigs.1854551. Epub 2011 Dec 23.

26.

Genome sequence of strain HIMB55, a novel marine gammaproteobacterium of the OM60/NOR5 clade.

Huggett MJ, Rappé MS.

J Bacteriol. 2012 May;194(9):2393-4. doi: 10.1128/JB.00171-12.

27.

Phylogenomic evidence for a common ancestor of mitochondria and the SAR11 clade.

Thrash JC, Boyd A, Huggett MJ, Grote J, Carini P, Yoder RJ, Robbertse B, Spatafora JW, Rappé MS, Giovannoni SJ.

Sci Rep. 2011;1:13. doi: 10.1038/srep00013. Epub 2011 Jun 14.

28.

Genome sequence of strain HIMB30, a novel member of the marine Gammaproteobacteria.

Huggett MJ, Rappé MS.

J Bacteriol. 2012 Feb;194(3):732-3. doi: 10.1128/JB.06506-11.

29.

Non-random assembly of bacterioplankton communities in the subtropical north pacific ocean.

Eiler A, Hayakawa DH, Rappé MS.

Front Microbiol. 2011 Jul 1;2:140. doi: 10.3389/fmicb.2011.00140. eCollection 2011.

30.

Humpback whales harbour a combination of specific and variable skin bacteria.

Apprill A, Mooney TA, Lyman E, Stimpert AK, Rappé MS.

Environ Microbiol Rep. 2011 Apr;3(2):223-32. doi: 10.1111/j.1758-2229.2010.00213.x. Epub 2010 Sep 27.

PMID:
23761254
31.

Dynamics of the SAR11 bacterioplankton lineage in relation to environmental conditions in the oligotrophic North Pacific subtropical gyre.

Eiler A, Hayakawa DH, Church MJ, Karl DM, Rappé MS.

Environ Microbiol. 2009 Sep;11(9):2291-300. doi: 10.1111/j.1462-2920.2009.01954.x. Epub 2009 Jun 1.

PMID:
19490029
32.

The onset of microbial associations in the coral Pocillopora meandrina.

Apprill A, Marlow HQ, Martindale MQ, Rappé MS.

ISME J. 2009 Jun;3(6):685-99. doi: 10.1038/ismej.2009.3. Epub 2009 Feb 26.

PMID:
19242535
33.

Phytoplankton in the ocean use non-phosphorus lipids in response to phosphorus scarcity.

Van Mooy BA, Fredricks HF, Pedler BE, Dyhrman ST, Karl DM, Koblízek M, Lomas MW, Mincer TJ, Moore LR, Moutin T, Rappé MS, Webb EA.

Nature. 2009 Mar 5;458(7234):69-72. doi: 10.1038/nature07659.

PMID:
19182781
34.

The small genome of an abundant coastal ocean methylotroph.

Giovannoni SJ, Hayakawa DH, Tripp HJ, Stingl U, Givan SA, Cho JC, Oh HM, Kitner JB, Vergin KL, Rappé MS.

Environ Microbiol. 2008 Jul;10(7):1771-82. doi: 10.1111/j.1462-2920.2008.01598.x. Epub 2008 Apr 3.

PMID:
18393994
35.

What's the 'meta' with metagenomics?

Steward GF, Rappé MS.

ISME J. 2007 Jun;1(2):100-2. Epub 2007 May 17. No abstract available.

PMID:
18043619
36.

High intraspecific recombination rate in a native population of Candidatus pelagibacter ubique (SAR11).

Vergin KL, Tripp HJ, Wilhelm LJ, Denver DR, Rappé MS, Giovannoni SJ.

Environ Microbiol. 2007 Oct;9(10):2430-40.

PMID:
17803769
37.

Mesoscale eddies drive increased silica export in the subtropical Pacific Ocean.

Benitez-Nelson CR, Bidigare RR, Dickey TD, Landry MR, Leonard CL, Brown SL, Nencioli F, Rii YM, Maiti K, Becker JW, Bibby TS, Black W, Cai WJ, Carlson CA, Chen F, Kuwahara VS, Mahaffey C, McAndrew PM, Quay PD, Rappé MS, Selph KE, Simmons MP, Yang EJ.

Science. 2007 May 18;316(5827):1017-21.

38.

Proteorhodopsin in the ubiquitous marine bacterium SAR11.

Giovannoni SJ, Bibbs L, Cho JC, Stapels MD, Desiderio R, Vergin KL, Rappé MS, Laney S, Wilhelm LJ, Tripp HJ, Mathur EJ, Barofsky DF.

Nature. 2005 Nov 3;438(7064):82-5.

PMID:
16267553
39.

Molecular analysis of a consortium of ruminal microbes that detoxify pyrrolizidine alkaloids.

Lodge-Ivey SL, Rappe MS, Johnston WH, Bohlken RE, Craig AM.

Can J Microbiol. 2005 Jun;51(6):455-65.

PMID:
16121223
40.

Genome streamlining in a cosmopolitan oceanic bacterium.

Giovannoni SJ, Tripp HJ, Givan S, Podar M, Vergin KL, Baptista D, Bibbs L, Eads J, Richardson TH, Noordewier M, Rappé MS, Short JM, Carrington JC, Mathur EJ.

Science. 2005 Aug 19;309(5738):1242-5.

41.

Prevalence of the Chloroflexi-related SAR202 bacterioplankton cluster throughout the mesopelagic zone and deep ocean.

Morris RM, Rappé MS, Urbach E, Connon SA, Giovannoni SJ.

Appl Environ Microbiol. 2004 May;70(5):2836-42.

42.

The uncultured microbial majority.

Rappé MS, Giovannoni SJ.

Annu Rev Microbiol. 2003;57:369-94. Review.

PMID:
14527284
43.

Fluids from aging ocean crust that support microbial life.

Cowen JP, Giovannoni SJ, Kenig F, Johnson HP, Butterfield D, Rappé MS, Hutnak M, Lam P.

Science. 2003 Jan 3;299(5603):120-3.

44.

SAR11 clade dominates ocean surface bacterioplankton communities.

Morris RM, Rappé MS, Connon SA, Vergin KL, Siebold WA, Carlson CA, Giovannoni SJ.

Nature. 2002 Dec 19-26;420(6917):806-10.

PMID:
12490947
45.

Cultivation of the ubiquitous SAR11 marine bacterioplankton clade.

Rappé MS, Connon SA, Vergin KL, Giovannoni SJ.

Nature. 2002 Aug 8;418(6898):630-3.

PMID:
12167859
46.

Streamlined method to analyze 16S rRNA gene clone libraries.

Vergin KL, Rappé MS, Giovannoni SJ.

Biotechniques. 2001 May;30(5):938-40, 943-4. No abstract available.

47.
50.

Bacterial diversity among small-subunit rRNA gene clones and cellular isolates from the same seawater sample.

Suzuki MT, Rappé MS, Haimberger ZW, Winfield H, Adair N, Ströbel J, Giovannoni SJ.

Appl Environ Microbiol. 1997 Mar;63(3):983-9.

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