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Items: 22

1.

SATQPCR: Website for statistical analysis of real-time quantitative PCR data.

Rancurel C, van Tran T, Elie C, Hilliou F.

Mol Cell Probes. 2019 Aug;46:101418. doi: 10.1016/j.mcp.2019.07.001. Epub 2019 Jul 5.

PMID:
31283967
2.

In Vitro Acquisition of Specific Small Interfering RNAs Inhibits the Expression of Some Target Genes in the Plant Ectoparasite Xiphinema index.

Marmonier A, Perfus-Barbeoch L, Rancurel C, Boissinot S, Favery B, Demangeat G, Brault V.

Int J Mol Sci. 2019 Jul 3;20(13). pii: E3266. doi: 10.3390/ijms20133266.

3.

Genome-wide expert annotation of the epigenetic machinery of the plant-parasitic nematodes Meloidogyne spp., with a focus on the asexually reproducing species.

Pratx L, Rancurel C, Da Rocha M, Danchin EGJ, Castagnone-Sereno P, Abad P, Perfus-Barbeoch L.

BMC Genomics. 2018 May 3;19(1):321. doi: 10.1186/s12864-018-4686-x.

4.

The Transcriptomes of Xiphinema index and Longidorus elongatus Suggest Independent Acquisition of Some Plant Parasitism Genes by Horizontal Gene Transfer in Early-Branching Nematodes.

Danchin EGJ, Perfus-Barbeoch L, Rancurel C, Thorpe P, Da Rocha M, Bajew S, Neilson R, Guzeeva ES, Da Silva C, Guy J, Labadie K, Esmenjaud D, Helder J, Jones JT, den Akker SE.

Genes (Basel). 2017 Oct 23;8(10). pii: E287. doi: 10.3390/genes8100287.

5.

Alienness: Rapid Detection of Candidate Horizontal Gene Transfers across the Tree of Life.

Rancurel C, Legrand L, Danchin EGJ.

Genes (Basel). 2017 Sep 29;8(10). pii: E248. doi: 10.3390/genes8100248.

6.

Hybridization and polyploidy enable genomic plasticity without sex in the most devastating plant-parasitic nematodes.

Blanc-Mathieu R, Perfus-Barbeoch L, Aury JM, Da Rocha M, Gouzy J, Sallet E, Martin-Jimenez C, Bailly-Bechet M, Castagnone-Sereno P, Flot JF, Kozlowski DK, Cazareth J, Couloux A, Da Silva C, Guy J, Kim-Jo YJ, Rancurel C, Schiex T, Abad P, Wincker P, Danchin EGJ.

PLoS Genet. 2017 Jun 8;13(6):e1006777. doi: 10.1371/journal.pgen.1006777. eCollection 2017 Jun.

7.

Tomato root microbiota and Phytophthora parasitica-associated disease.

Larousse M, Rancurel C, Syska C, Palero F, Etienne C, Industri B, Nesme X, Bardin M, Galiana E.

Microbiome. 2017 May 16;5(1):56. doi: 10.1186/s40168-017-0273-7.

8.

Nod Factor Effects on Root Hair-Specific Transcriptome of Medicago truncatula: Focus on Plasma Membrane Transport Systems and Reactive Oxygen Species Networks.

Damiani I, Drain A, Guichard M, Balzergue S, Boscari A, Boyer JC, Brunaud V, Cottaz S, Rancurel C, Da Rocha M, Fizames C, Fort S, Gaillard I, Maillol V, Danchin EG, Rouached H, Samain E, Su YH, Thouin J, Touraine B, Puppo A, Frachisse JM, Pauly N, Sentenac H.

Front Plant Sci. 2016 Jun 7;7:794. doi: 10.3389/fpls.2016.00794. eCollection 2016.

9.

The genome of the yellow potato cyst nematode, Globodera rostochiensis, reveals insights into the basis of parasitism and virulence.

Eves-van den Akker S, Laetsch DR, Thorpe P, Lilley CJ, Danchin EG, Da Rocha M, Rancurel C, Holroyd NE, Cotton JA, Szitenberg A, Grenier E, Montarry J, Mimee B, Duceppe MO, Boyes I, Marvin JM, Jones LM, Yusup HB, Lafond-Lapalme J, Esquibet M, Sabeh M, Rott M, Overmars H, Finkers-Tomczak A, Smant G, Koutsovoulos G, Blok V, Mantelin S, Cock PJ, Phillips W, Henrissat B, Urwin PE, Blaxter M, Jones JT.

Genome Biol. 2016 Jun 10;17(1):124. doi: 10.1186/s13059-016-0985-1.

10.

Environmentally selected aphid variants in clonality context display differential patterns of methylation in the genome.

Pasquier C, Clément M, Dombrovsky A, Penaud S, Da Rocha M, Rancurel C, Ledger N, Capovilla M, Robichon A.

PLoS One. 2014 Dec 31;9(12):e115022. doi: 10.1371/journal.pone.0115022. eCollection 2014.

11.

The transcriptome of Nacobbus aberrans reveals insights into the evolution of sedentary endoparasitism in plant-parasitic nematodes.

Eves-van den Akker S, Lilley CJ, Danchin EG, Rancurel C, Cock PJ, Urwin PE, Jones JT.

Genome Biol Evol. 2014 Aug 13;6(9):2181-94. doi: 10.1093/gbe/evu171.

12.

A hierarchical classification of polysaccharide lyases for glycogenomics.

Lombard V, Bernard T, Rancurel C, Brumer H, Coutinho PM, Henrissat B.

Biochem J. 2010 Dec 15;432(3):437-44. doi: 10.1042/BJ20101185.

PMID:
20925655
13.

Overlapping genes produce proteins with unusual sequence properties and offer insight into de novo protein creation.

Rancurel C, Khosravi M, Dunker AK, Romero PR, Karlin D.

J Virol. 2009 Oct;83(20):10719-36. doi: 10.1128/JVI.00595-09. Epub 2009 Jul 29.

14.

The Carbohydrate-Active EnZymes database (CAZy): an expert resource for Glycogenomics.

Cantarel BL, Coutinho PM, Rancurel C, Bernard T, Lombard V, Henrissat B.

Nucleic Acids Res. 2009 Jan;37(Database issue):D233-8. doi: 10.1093/nar/gkn663. Epub 2008 Oct 5.

15.

Complete genome sequence of the complex carbohydrate-degrading marine bacterium, Saccharophagus degradans strain 2-40 T.

Weiner RM, Taylor LE 2nd, Henrissat B, Hauser L, Land M, Coutinho PM, Rancurel C, Saunders EH, Longmire AG, Zhang H, Bayer EA, Gilbert HJ, Larimer F, Zhulin IB, Ekborg NA, Lamed R, Richardson PM, Borovok I, Hutcheson S.

PLoS Genet. 2008 May 30;4(5):e1000087. doi: 10.1371/journal.pgen.1000087.

16.

FOLy: an integrated database for the classification and functional annotation of fungal oxidoreductases potentially involved in the degradation of lignin and related aromatic compounds.

Levasseur A, Piumi F, Coutinho PM, Rancurel C, Asther M, Delattre M, Henrissat B, Pontarotti P, Asther M, Record E.

Fungal Genet Biol. 2008 May;45(5):638-45. doi: 10.1016/j.fgb.2008.01.004. Epub 2008 Jan 26.

PMID:
18308593
17.

Dividing the large glycoside hydrolase family 13 into subfamilies: towards improved functional annotations of alpha-amylase-related proteins.

Stam MR, Danchin EG, Rancurel C, Coutinho PM, Henrissat B.

Protein Eng Des Sel. 2006 Dec;19(12):555-62. Epub 2006 Nov 2.

PMID:
17085431
18.

VaZyMolO: a tool to define and classify modularity in viral proteins.

Ferron F, Rancurel C, Longhi S, Cambillau C, Henrissat B, Canard B.

J Gen Virol. 2005 Mar;86(Pt 3):743-9.

PMID:
15722535
19.

The severe acute respiratory syndrome-coronavirus replicative protein nsp9 is a single-stranded RNA-binding subunit unique in the RNA virus world.

Egloff MP, Ferron F, Campanacci V, Longhi S, Rancurel C, Dutartre H, Snijder EJ, Gorbalenya AE, Cambillau C, Canard B.

Proc Natl Acad Sci U S A. 2004 Mar 16;101(11):3792-6. Epub 2004 Mar 8.

20.

Structural genomics of the SARS coronavirus: cloning, expression, crystallization and preliminary crystallographic study of the Nsp9 protein.

Campanacci V, Egloff MP, Longhi S, Ferron F, Rancurel C, Salomoni A, Durousseau C, Tocque F, Brémond N, Dobbe JC, Snijder EJ, Canard B, Cambillau C.

Acta Crystallogr D Biol Crystallogr. 2003 Sep;59(Pt 9):1628-31. Epub 2003 Aug 19.

PMID:
12925794
21.

A linear, four-spin Mn(II)-nitronyl-nitroxide-substituted phosphine oxide system exhibiting both antiferro- and ferromagnetic interactions.

Rancurel C, Leznoff DB, Sutter JP, Guionneau P, Chasseau D, Kliava J, Kahn O.

Inorg Chem. 2000 Apr 3;39(7):1602-5. No abstract available.

PMID:
12526472
22.

Synthesis, Structure, and Magnetism of Mono- and Binuclear Manganese(II) Compounds of Nitronyl Nitroxide Substituted Phosphine Oxides.

Rancurel C, Leznoff DB, Sutter JP, Golhen S, Ouahab L, Kliava J, Kahn O.

Inorg Chem. 1999 Oct 18;38(21):4753-4758.

PMID:
11671201

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