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Items: 28

1.

Exploring Plasmodium falciparum Var Gene Expression to Assess Host Selection Pressure on Parasites During Infancy.

Kivisi CA, Muthui M, Hunt M, Fegan G, Otto TD, Githinji G, Warimwe GM, Rance R, Marsh K, Bull PC, Abdi AI.

Front Immunol. 2019 Oct 9;10:2328. doi: 10.3389/fimmu.2019.02328. eCollection 2019.

2.

Identification of antigen-specific B cell receptor sequences using public repertoire analysis.

Trück J, Ramasamy MN, Galson JD, Rance R, Parkhill J, Lunter G, Pollard AJ, Kelly DF.

J Immunol. 2015 Jan 1;194(1):252-261. doi: 10.4049/jimmunol.1401405. Epub 2014 Nov 12.

3.

Diarrhea in young children from low-income countries leads to large-scale alterations in intestinal microbiota composition.

Pop M, Walker AW, Paulson J, Lindsay B, Antonio M, Hossain MA, Oundo J, Tamboura B, Mai V, Astrovskaya I, Corrada Bravo H, Rance R, Stares M, Levine MM, Panchalingam S, Kotloff K, Ikumapayi UN, Ebruke C, Adeyemi M, Ahmed D, Ahmed F, Alam MT, Amin R, Siddiqui S, Ochieng JB, Ouma E, Juma J, Mailu E, Omore R, Morris JG, Breiman RF, Saha D, Parkhill J, Nataro JP, Stine OC.

Genome Biol. 2014 Jun 27;15(6):R76. doi: 10.1186/gb-2014-15-6-r76.

4.

Survey of culture, goldengate assay, universal biosensor assay, and 16S rRNA Gene sequencing as alternative methods of bacterial pathogen detection.

Lindsay B, Pop M, Antonio M, Walker AW, Mai V, Ahmed D, Oundo J, Tamboura B, Panchalingam S, Levine MM, Kotloff K, Li S, Magder LS, Paulson JN, Liu B, Ikumapayi U, Ebruke C, Dione M, Adeyemi M, Rance R, Stares MD, Ukhanova M, Barnes B, Lewis I, Ahmed F, Alam MT, Amin R, Siddiqui S, Ochieng JB, Ouma E, Juma J, Mailu E, Omore R, O'Reilly CE, Hannis J, Manalili S, Deleon J, Yasuda I, Blyn L, Ranken R, Li F, Housley R, Ecker DJ, Hossain MA, Breiman RF, Morris JG, McDaniel TK, Parkhill J, Saha D, Sampath R, Stine OC, Nataro JP.

J Clin Microbiol. 2013 Oct;51(10):3263-9. doi: 10.1128/JCM.01342-13. Epub 2013 Jul 24.

5.

Network properties derived from deep sequencing of human B-cell receptor repertoires delineate B-cell populations.

Bashford-Rogers RJ, Palser AL, Huntly BJ, Rance R, Vassiliou GS, Follows GA, Kellam P.

Genome Res. 2013 Nov;23(11):1874-84. doi: 10.1101/gr.154815.113. Epub 2013 Jun 6.

6.

Restriction of V3 region sequence divergence in the HIV-1 envelope gene during antiretroviral treatment in a cohort of recent seroconverters.

Gall A, Kaye S, Hué S, Bonsall D, Rance R, Baillie GJ, Fidler SJ, Weber JN, McClure MO, Kellam P; SPARTAC Trial Investigators.

Retrovirology. 2013 Jan 18;10:8. doi: 10.1186/1742-4690-10-8.

7.

Mutational processes molding the genomes of 21 breast cancers.

Nik-Zainal S, Alexandrov LB, Wedge DC, Van Loo P, Greenman CD, Raine K, Jones D, Hinton J, Marshall J, Stebbings LA, Menzies A, Martin S, Leung K, Chen L, Leroy C, Ramakrishna M, Rance R, Lau KW, Mudie LJ, Varela I, McBride DJ, Bignell GR, Cooke SL, Shlien A, Gamble J, Whitmore I, Maddison M, Tarpey PS, Davies HR, Papaemmanuil E, Stephens PJ, McLaren S, Butler AP, Teague JW, Jönsson G, Garber JE, Silver D, Miron P, Fatima A, Boyault S, Langerød A, Tutt A, Martens JW, Aparicio SA, Borg Å, Salomon AV, Thomas G, Børresen-Dale AL, Richardson AL, Neuberger MS, Futreal PA, Campbell PJ, Stratton MR; Breast Cancer Working Group of the International Cancer Genome Consortium.

Cell. 2012 May 25;149(5):979-93. doi: 10.1016/j.cell.2012.04.024. Epub 2012 May 17.

8.

The life history of 21 breast cancers.

Nik-Zainal S, Van Loo P, Wedge DC, Alexandrov LB, Greenman CD, Lau KW, Raine K, Jones D, Marshall J, Ramakrishna M, Shlien A, Cooke SL, Hinton J, Menzies A, Stebbings LA, Leroy C, Jia M, Rance R, Mudie LJ, Gamble SJ, Stephens PJ, McLaren S, Tarpey PS, Papaemmanuil E, Davies HR, Varela I, McBride DJ, Bignell GR, Leung K, Butler AP, Teague JW, Martin S, Jönsson G, Mariani O, Boyault S, Miron P, Fatima A, Langerød A, Aparicio SA, Tutt A, Sieuwerts AM, Borg Å, Thomas G, Salomon AV, Richardson AL, Børresen-Dale AL, Futreal PA, Stratton MR, Campbell PJ; Breast Cancer Working Group of the International Cancer Genome Consortium.

Cell. 2012 May 25;149(5):994-1007. doi: 10.1016/j.cell.2012.04.023. Epub 2012 May 17. Erratum in: Cell. 2015 Aug 13;162(4):924.

9.

Somatic SF3B1 mutation in myelodysplasia with ring sideroblasts.

Papaemmanuil E, Cazzola M, Boultwood J, Malcovati L, Vyas P, Bowen D, Pellagatti A, Wainscoat JS, Hellstrom-Lindberg E, Gambacorti-Passerini C, Godfrey AL, Rapado I, Cvejic A, Rance R, McGee C, Ellis P, Mudie LJ, Stephens PJ, McLaren S, Massie CE, Tarpey PS, Varela I, Nik-Zainal S, Davies HR, Shlien A, Jones D, Raine K, Hinton J, Butler AP, Teague JW, Baxter EJ, Score J, Galli A, Della Porta MG, Travaglino E, Groves M, Tauro S, Munshi NC, Anderson KC, El-Naggar A, Fischer A, Mustonen V, Warren AJ, Cross NC, Green AR, Futreal PA, Stratton MR, Campbell PJ; Chronic Myeloid Disorders Working Group of the International Cancer Genome Consortium.

N Engl J Med. 2011 Oct 13;365(15):1384-95. doi: 10.1056/NEJMoa1103283. Epub 2011 Sep 26.

10.

Citrobacter rodentium is an unstable pathogen showing evidence of significant genomic flux.

Petty NK, Feltwell T, Pickard D, Clare S, Toribio AL, Fookes M, Roberts K, Monson R, Nair S, Kingsley RA, Bulgin R, Wiles S, Goulding D, Keane T, Corton C, Lennard N, Harris D, Willey D, Rance R, Yu L, Choudhary JS, Churcher C, Quail MA, Parkhill J, Frankel G, Dougan G, Salmond GP, Thomson NR.

PLoS Pathog. 2011 Apr;7(4):e1002018. doi: 10.1371/journal.ppat.1002018. Epub 2011 Apr 7.

11.

Genome sequence of the zoonotic pathogen Chlamydophila psittaci.

Seth-Smith HM, Harris SR, Rance R, West AP, Severin JA, Ossewaarde JM, Cutcliffe LT, Skilton RJ, Marsh P, Parkhill J, Clarke IN, Thomson NR.

J Bacteriol. 2011 Mar;193(5):1282-3. doi: 10.1128/JB.01435-10. Epub 2010 Dec 23.

12.

A conserved acetyl esterase domain targets diverse bacteriophages to the Vi capsular receptor of Salmonella enterica serovar Typhi.

Pickard D, Toribio AL, Petty NK, van Tonder A, Yu L, Goulding D, Barrell B, Rance R, Harris D, Wetter M, Wain J, Choudhary J, Thomson N, Dougan G.

J Bacteriol. 2010 Nov;192(21):5746-54. doi: 10.1128/JB.00659-10. Epub 2010 Sep 3.

13.

Evolutionary dynamics of Clostridium difficile over short and long time scales.

He M, Sebaihia M, Lawley TD, Stabler RA, Dawson LF, Martin MJ, Holt KE, Seth-Smith HM, Quail MA, Rance R, Brooks K, Churcher C, Harris D, Bentley SD, Burrows C, Clark L, Corton C, Murray V, Rose G, Thurston S, van Tonder A, Walker D, Wren BW, Dougan G, Parkhill J.

Proc Natl Acad Sci U S A. 2010 Apr 20;107(16):7527-32. doi: 10.1073/pnas.0914322107. Epub 2010 Apr 5.

14.

A high-throughput splinkerette-PCR method for the isolation and sequencing of retroviral insertion sites.

Uren AG, Mikkers H, Kool J, van der Weyden L, Lund AH, Wilson CH, Rance R, Jonkers J, van Lohuizen M, Berns A, Adams DJ.

Nat Protoc. 2009;4(5):789-98. doi: 10.1038/nprot.2009.64. Epub 2009 Apr 30.

15.

TWEAK is expressed at the cell surface of monocytes during multiple sclerosis.

Desplat-Jégo S, Feuillet L, Creidy R, Malikova I, Rance R, Khrestchatisky M, Hahm K, Burkly LC, Pelletier J, Boucraut J.

J Leukoc Biol. 2009 Jan;85(1):132-5. doi: 10.1189/jlb.0608347. Epub 2008 Oct 22.

PMID:
18945822
16.

Centrosome overduplication and mitotic instability in PKD2 transgenic lines.

Burtey S, Riera M, Ribe E, Pennenkamp P, Rance R, Luciani J, Dworniczak B, Mattei MG, Fontés M.

Cell Biol Int. 2008 Oct;32(10):1193-8. doi: 10.1016/j.cellbi.2008.07.021. Epub 2008 Aug 6.

PMID:
18725310
17.

Subclonal phylogenetic structures in cancer revealed by ultra-deep sequencing.

Campbell PJ, Pleasance ED, Stephens PJ, Dicks E, Rance R, Goodhead I, Follows GA, Green AR, Futreal PA, Stratton MR.

Proc Natl Acad Sci U S A. 2008 Sep 2;105(35):13081-6. doi: 10.1073/pnas.0801523105. Epub 2008 Aug 22.

18.

High-throughput sequencing provides insights into genome variation and evolution in Salmonella Typhi.

Holt KE, Parkhill J, Mazzoni CJ, Roumagnac P, Weill FX, Goodhead I, Rance R, Baker S, Maskell DJ, Wain J, Dolecek C, Achtman M, Dougan G.

Nat Genet. 2008 Aug;40(8):987-93. doi: 10.1038/ng.195. Epub 2008 Jul 27.

19.

Overexpression of PKD2 in the mouse is associated with renal tubulopathy.

Burtey S, Riera M, Ribe E, Pennekamp P, Passage E, Rance R, Dworniczak B, Fontés M.

Nephrol Dial Transplant. 2008 Apr;23(4):1157-65. Epub 2007 Nov 29.

PMID:
18048422
20.

Chlamydia trachomatis: genome sequence analysis of lymphogranuloma venereum isolates.

Thomson NR, Holden MT, Carder C, Lennard N, Lockey SJ, Marsh P, Skipp P, O'Connor CD, Goodhead I, Norbertzcak H, Harris B, Ormond D, Rance R, Quail MA, Parkhill J, Stephens RS, Clarke IN.

Genome Res. 2008 Jan;18(1):161-71. Epub 2007 Nov 21.

21.

Mycobacterial esophagitis in AIDS.

Goodman P, Pinero SS, Rance RM, Mansell PW, Uribe-Botero G.

Gastrointest Radiol. 1989 Spring;14(2):103-5.

PMID:
2496001
22.

Immunosuppressive properties of human placenta: study of supernatants from short-term syncytiotrophoblast cultures.

Culouscou JM, Remacle-Bonnet MM, Pommier G, Rance RJ, Depieds RC.

J Reprod Immunol. 1986 Apr;9(1):33-47.

PMID:
3023607
23.

Immunoregulatory activities of human trophoblasts mediated by polyamine complexes.

Remacle-Bonnet M, Culouscou JM, Pommier G, Rance R, Depieds R.

Am J Reprod Immunol Microbiol. 1985 Jun;8(2):55-61.

PMID:
4025667
24.

Non-specific immunoregulatory factors in the cytosol fraction of human trophoblast.

Remacle-Bonnet MM, Rance RJ, Depieds RC.

J Reprod Immunol. 1983 May;5(3):123-34.

PMID:
6223138
25.

Nonspecific inhibitory activity of soluble human colon carcinoma extracts: tentative mechanism of action.

Pommier GJ, Remacle-Bonnet MM, Rance RJ, Depieds RC.

J Natl Cancer Inst. 1981 Oct;67(4):791-802.

PMID:
6456370
26.

Nonspecific suppressive and cytostatic activities mediated by human colonic carcinoma tissue or cultured cell extract.

Remacle-Bonnet MM, Pommier GJ, Luc C, Rance RJ, Depieds RC.

J Immunol. 1978 Jul;121(1):44-52.

PMID:
670707
27.

Inhibition of normal allogenic lymphocyte mitogenesis by a soluble inhibitor extracted from human colonic carcinoma.

Remacle-Bonnet MM, Pommier FJ, Kaplanski S, Rance RJ, Depieds RC.

J Immunol. 1976 Oct;117(4):1145-51.

PMID:
977947
28.

[Proceedings: Inhibition of blast transformation of normal human lymphocytes by extracts of colonic tumor].

Remacle-Bonnet M, Rance R, Depieds R.

Ann Immunol (Paris). 1975 Apr;126(3):367-8. French. No abstract available.

PMID:
1180507

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