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Items: 1 to 50 of 88

1.

Exclusivity and Compensation in NFκB Dimer Distributions and IκB Inhibition.

Ramsey KM, Chen W, Marion JD, Bergqvist S, Komives EA.

Biochemistry. 2019 May 28;58(21):2555-2563. doi: 10.1021/acs.biochem.9b00008. Epub 2019 May 14.

PMID:
31033276
2.

Transcriptional Basis for Rhythmic Control of Hunger and Metabolism within the AgRP Neuron.

Cedernaes J, Huang W, Ramsey KM, Waldeck N, Cheng L, Marcheva B, Omura C, Kobayashi Y, Peek CB, Levine DC, Dhir R, Awatramani R, Bradfield CA, Wang XA, Takahashi JS, Mokadem M, Ahima RS, Bass J.

Cell Metab. 2019 May 7;29(5):1078-1091.e5. doi: 10.1016/j.cmet.2019.01.023. Epub 2019 Feb 28.

PMID:
30827863
3.

Requirement for NF-κB in maintenance of molecular and behavioral circadian rhythms in mice.

Hong HK, Maury E, Ramsey KM, Perelis M, Marcheva B, Omura C, Kobayashi Y, Guttridge DC, Barish GD, Bass J.

Genes Dev. 2018 Nov 1;32(21-22):1367-1379. doi: 10.1101/gad.319228.118. Epub 2018 Oct 26.

4.

A Recurrent De Novo PACS2 Heterozygous Missense Variant Causes Neonatal-Onset Developmental Epileptic Encephalopathy, Facial Dysmorphism, and Cerebellar Dysgenesis.

Olson HE, Jean-Marçais N, Yang E, Heron D, Tatton-Brown K, van der Zwaag PA, Bijlsma EK, Krock BL, Backer E, Kamsteeg EJ, Sinnema M, Reijnders MRF, Bearden D, Begtrup A, Telegrafi A, Lunsing RJ, Burglen L, Lesca G, Cho MT, Smith LA, Sheidley BR, El Achkar CM, Pearl PL, Poduri A, Skraban CM, Tarpinian J, Nesbitt AI, Fransen van de Putte DE, Ruivenkamp CAL, Rump P, Chatron N, Sabatier I, De Bellescize J, Guibaud L, Sweetser DA, Waxler JL, Wierenga KJ; DDD Study, Donadieu J, Narayanan V, Ramsey KM; C4RCD Research Group, Nava C, Rivière JB, Vitobello A, Mau-Them FT, Philippe C, Bruel AL, Duffourd Y, Thomas L, Lelieveld SH, Schuurs-Hoeijmakers J, Brunner HG, Keren B, Thevenon J, Faivre L, Thomas G, Thauvin-Robinet C.

Am J Hum Genet. 2018 Oct 4;103(4):631. doi: 10.1016/j.ajhg.2018.09.002. No abstract available.

5.
6.

RNAs interact with BRD4 to promote enhanced chromatin engagement and transcription activation.

Rahnamoun H, Lee J, Sun Z, Lu H, Ramsey KM, Komives EA, Lauberth SM.

Nat Struct Mol Biol. 2018 Aug;25(8):687-697. doi: 10.1038/s41594-018-0102-0. Epub 2018 Aug 3.

PMID:
30076409
7.

Pervasive Targeting of Nascent Transcripts by Hfq.

Kambara TK, Ramsey KM, Dove SL.

Cell Rep. 2018 May 1;23(5):1543-1552. doi: 10.1016/j.celrep.2018.03.134.

8.

A Recurrent De Novo PACS2 Heterozygous Missense Variant Causes Neonatal-Onset Developmental Epileptic Encephalopathy, Facial Dysmorphism, and Cerebellar Dysgenesis.

Olson HE, Jean-Marçais N, Yang E, Heron D, Tatton-Brown K, van der Zwaag PA, Bijlsma EK, Krock BL, Backer E, Kamsteeg EJ, Sinnema M, Reijnders MRF, Bearden D, Begtrup A, Telegrafi A, Lunsing RJ, Burglen L, Lesca G, Cho MT, Smith LA, Sheidley BR, Moufawad El Achkar C, Pearl PL, Poduri A, Skraban CM, Tarpinian J, Nesbitt AI, Fransen van de Putte DE, Ruivenkamp CAL, Rump P, Chatron N, Sabatier I, De Bellescize J, Guibaud L, Sweetser DA, Waxler JL, Wierenga KJ; DDD Study, Donadieu J, Narayanan V, Ramsey KM; C4RCD Research Group, Nava C, Rivière JB, Vitobello A, Tran Mau-Them F, Philippe C, Bruel AL, Duffourd Y, Thomas L, Lelieveld SH, Schuurs-Hoeijmakers J, Brunner HG, Keren B, Thevenon J, Faivre L, Thomas G, Thauvin-Robinet C.

Am J Hum Genet. 2018 May 3;102(5):995-1007. doi: 10.1016/j.ajhg.2018.03.005. Epub 2018 Apr 12. Erratum in: Am J Hum Genet. 2018 Oct 4;103(4):631.

9.

A day in the life of chromatin: how enhancer-promoter loops shape daily behavior.

Weidemann BJ, Ramsey KM, Bass J.

Genes Dev. 2018 Mar 1;32(5-6):321-323. doi: 10.1101/gad.314187.118. Review.

10.

Polyphosphate Kinase Antagonizes Virulence Gene Expression in Francisella tularensis.

Rohlfing AE, Ramsey KM, Dove SL.

J Bacteriol. 2018 Jan 10;200(3). pii: e00460-17. doi: 10.1128/JB.00460-17. Print 2018 Feb 1.

11.

Genetic, Phenotypic, and Interferon Biomarker Status in ADAR1-Related Neurological Disease.

Rice GI, Kitabayashi N, Barth M, Briggs TA, Burton ACE, Carpanelli ML, Cerisola AM, Colson C, Dale RC, Danti FR, Darin N, De Azua B, De Giorgis V, De Goede CGL, Desguerre I, De Laet C, Eslahi A, Fahey MC, Fallon P, Fay A, Fazzi E, Gorman MP, Gowrinathan NR, Hully M, Kurian MA, Leboucq N, Lin JS, Lines MA, Mar SS, Maroofian R, Martí-Sanchez L, McCullagh G, Mojarrad M, Narayanan V, Orcesi S, Ortigoza-Escobar JD, Pérez-Dueñas B, Petit F, Ramsey KM, Rasmussen M, Rivier F, Rodríguez-Pombo P, Roubertie A, Stödberg TI, Toosi MB, Toutain A, Uettwiller F, Ulrick N, Vanderver A, Waldman A, Livingston JH, Crow YJ.

Neuropediatrics. 2017 Jun;48(3):166-184. doi: 10.1055/s-0037-1601449. Epub 2017 Apr 10.

12.

Mobile mental health interventions following war and disaster.

Ruzek JI, Kuhn E, Jaworski BK, Owen JE, Ramsey KM.

Mhealth. 2016 Sep 29;2:37. doi: 10.21037/mhealth.2016.08.06. eCollection 2016. Review.

13.

DNA and IκBα Both Induce Long-Range Conformational Changes in NFκB.

Ramsey KM, Dembinski HE, Chen W, Ricci CG, Komives EA.

J Mol Biol. 2017 Apr 7;429(7):999-1008. doi: 10.1016/j.jmb.2017.02.017. Epub 2017 Feb 27.

14.

Secreted Effectors Encoded within and outside of the Francisella Pathogenicity Island Promote Intramacrophage Growth.

Eshraghi A, Kim J, Walls AC, Ledvina HE, Miller CN, Ramsey KM, Whitney JC, Radey MC, Peterson SB, Ruhland BR, Tran BQ, Goo YA, Goodlett DR, Dove SL, Celli J, Veesler D, Mougous JD.

Cell Host Microbe. 2016 Nov 9;20(5):573-583. doi: 10.1016/j.chom.2016.10.008.

15.

Circadian Clock Interaction with HIF1α Mediates Oxygenic Metabolism and Anaerobic Glycolysis in Skeletal Muscle.

Peek CB, Levine DC, Cedernaes J, Taguchi A, Kobayashi Y, Tsai SJ, Bonar NA, McNulty MR, Ramsey KM, Bass J.

Cell Metab. 2017 Jan 10;25(1):86-92. doi: 10.1016/j.cmet.2016.09.010. Epub 2016 Oct 20.

16.

Circadian Transcription from Beta Cell Function to Diabetes Pathophysiology.

Perelis M, Ramsey KM, Marcheva B, Bass J.

J Biol Rhythms. 2016 Aug;31(4):323-36. doi: 10.1177/0748730416656949. Review.

PMID:
27440914
17.

A response regulator promotes Francisella tularensis intramacrophage growth by repressing an anti-virulence factor.

Ramsey KM, Dove SL.

Mol Microbiol. 2016 Aug;101(4):688-700. doi: 10.1111/mmi.13418. Epub 2016 Jun 10.

18.

Binding of NFκB Appears to Twist the Ankyrin Repeat Domain of IκBα.

Trelle MB, Ramsey KM, Lee TC, Zheng W, Lamboy J, Wolynes PG, Deniz A, Komives EA.

Biophys J. 2016 Feb 23;110(4):887-95. doi: 10.1016/j.bpj.2016.01.001.

19.

CBT-I Coach: A Description and Clinician Perceptions of a Mobile App for Cognitive Behavioral Therapy for Insomnia.

Kuhn E, Weiss BJ, Taylor KL, Hoffman JE, Ramsey KM, Manber R, Gehrman P, Crowley JJ, Ruzek JI, Trockel M.

J Clin Sleep Med. 2016 Apr 15;12(4):597-606. doi: 10.5664/jcsm.5700.

20.

mHealth in the Wild: Using Novel Data to Examine the Reach, Use, and Impact of PTSD Coach.

Owen JE, Jaworski BK, Kuhn E, Makin-Byrd KN, Ramsey KM, Hoffman JE.

JMIR Ment Health. 2015 Mar 25;2(1):e7. doi: 10.2196/mental.3935. eCollection 2015 Jan-Mar.

21.

Pancreatic β cell enhancers regulate rhythmic transcription of genes controlling insulin secretion.

Perelis M, Marcheva B, Ramsey KM, Schipma MJ, Hutchison AL, Taguchi A, Peek CB, Hong H, Huang W, Omura C, Allred AL, Bradfield CA, Dinner AR, Barish GD, Bass J.

Science. 2015 Nov 6;350(6261):aac4250. doi: 10.1126/science.aac4250.

22.

The molecular clock as a metabolic rheostat.

Perelis M, Ramsey KM, Bass J.

Diabetes Obes Metab. 2015 Sep;17 Suppl 1:99-105. doi: 10.1111/dom.12521. Review.

23.

Dual allosteric activation mechanisms in monomeric human glucokinase.

Whittington AC, Larion M, Bowler JM, Ramsey KM, Brüschweiler R, Miller BG.

Proc Natl Acad Sci U S A. 2015 Sep 15;112(37):11553-8. doi: 10.1073/pnas.1506664112. Epub 2015 Aug 17.

24.

A self-lysis pathway that enhances the virulence of a pathogenic bacterium.

McFarland KA, Dolben EL, LeRoux M, Kambara TK, Ramsey KM, Kirkpatrick RL, Mougous JD, Hogan DA, Dove SL.

Proc Natl Acad Sci U S A. 2015 Jul 7;112(27):8433-8. doi: 10.1073/pnas.1506299112. Epub 2015 Jun 22.

25.

Co-Reactivation of Cytomegalovirus and Human Herpesvirus-6 Among ICU Patients: There's Smoke, But Is There Fire?

Ramsey KM, Akula SM.

Crit Care Med. 2015 Jul;43(7):1539-40. doi: 10.1097/CCM.0000000000001045. No abstract available.

PMID:
26079234
26.

Ubiquitous promoter-localization of essential virulence regulators in Francisella tularensis.

Ramsey KM, Osborne ML, Vvedenskaya IO, Su C, Nickels BE, Dove SL.

PLoS Pathog. 2015 Apr 1;11(4):e1004793. doi: 10.1371/journal.ppat.1004793. eCollection 2015 Apr.

27.

Circadian regulation of cellular physiology.

Peek CB, Ramsey KM, Levine DC, Marcheva B, Perelis M, Bass J.

Methods Enzymol. 2015;552:165-84. doi: 10.1016/bs.mie.2014.10.006. Epub 2015 Jan 5. Review.

28.

Characterization of X chromosome inactivation using integrated analysis of whole-exome and mRNA sequencing.

Szelinger S, Malenica I, Corneveaux JJ, Siniard AL, Kurdoglu AA, Ramsey KM, Schrauwen I, Trent JM, Narayanan V, Huentelman MJ, Craig DW.

PLoS One. 2014 Dec 12;9(12):e113036. doi: 10.1371/journal.pone.0113036. eCollection 2014.

29.

A case control study of environmental and occupational exposures associated with methicillin resistant Staphylococcus aureus nasal carriage in patients admitted to a rural tertiary care hospital in a high density swine region.

Schinasi L, Wing S, Augustino KL, Ramsey KM, Nobles DL, Richardson DB, Price LB, Aziz M, MacDonald PD, Stewart JR.

Environ Health. 2014 Jun 23;13(1):54. doi: 10.1186/1476-069X-13-54.

30.

Correlation between methicillin-resistant Staphylococcus aureus nasal sampling and S. aureus pneumonia in the medical intensive care unit.

Rimawi RH, Ramsey KM, Shah KB, Cook PP.

Infect Control Hosp Epidemiol. 2014 May;35(5):590-3. doi: 10.1086/675838. Epub 2014 Mar 14. No abstract available.

PMID:
24709733
31.

Preliminary evaluation of PTSD Coach, a smartphone app for post-traumatic stress symptoms.

Kuhn E, Greene C, Hoffman J, Nguyen T, Wald L, Schmidt J, Ramsey KM, Ruzek J.

Mil Med. 2014 Jan;179(1):12-8. doi: 10.7205/MILMED-D-13-00271.

PMID:
24402979
32.

Clinician perceptions of using a smartphone app with prolonged exposure therapy.

Kuhn E, Eftekhari A, Hoffman JE, Crowley JJ, Ramsey KM, Reger GM, Ruzek JI.

Adm Policy Ment Health. 2014 Nov;41(6):800-7. doi: 10.1007/s10488-013-0532-2.

PMID:
24398700
33.

The impact of a "search and destroy" strategy for the prevention of methicillin-resistant Staphylococcus aureus infections in an inpatient rehabilitation facility.

Widner A, Nobles DL, Faulk C, Vos P, Ramsey KM.

PM R. 2014 Feb;6(2):121-6; quiz 126. doi: 10.1016/j.pmrj.2013.09.013. Epub 2013 Oct 6.

PMID:
24107426
34.

Circadian clock NAD+ cycle drives mitochondrial oxidative metabolism in mice.

Peek CB, Affinati AH, Ramsey KM, Kuo HY, Yu W, Sena LA, Ilkayeva O, Marcheva B, Kobayashi Y, Omura C, Levine DC, Bacsik DJ, Gius D, Newgard CB, Goetzman E, Chandel NS, Denu JM, Mrksich M, Bass J.

Science. 2013 Nov 1;342(6158):1243417. doi: 10.1126/science.1243417. Epub 2013 Sep 19.

35.

Circadian measurements of sirtuin biology.

Ramsey KM, Affinati AH, Peek CB, Marcheva B, Hong HK, Bass J.

Methods Mol Biol. 2013;1077:285-302. doi: 10.1007/978-1-62703-637-5_19.

36.

Genetic advances in ophthalmology: the role of melanopsin-expressing, intrinsically photosensitive retinal ganglion cells in the circadian organization of the visual system.

Ramsey DJ, Ramsey KM, Vavvas DG.

Semin Ophthalmol. 2013 Sep-Nov;28(5-6):406-21. doi: 10.3109/08820538.2013.825294. Epub 2013 Sep 6. Review.

PMID:
24010846
37.

Medical and household characteristics associated with methicillin resistant Staphylococcus aureus nasal carriage among patients admitted to a rural tertiary care hospital.

Schinasi L, Wing S, MacDonald PD, Richardson DB, Stewart JR, L Augustino K, Nobles DL, Ramsey KM.

PLoS One. 2013 Aug 26;8(8):e73595. doi: 10.1371/journal.pone.0073595. eCollection 2013.

38.

Circadian clocks and metabolism.

Marcheva B, Ramsey KM, Peek CB, Affinati A, Maury E, Bass J.

Handb Exp Pharmacol. 2013;(217):127-55. doi: 10.1007/978-3-642-25950-0_6. Review.

39.

Outbreak of Mycobacterium mucogenicum bloodstream infections among patients with sickle cell disease in an outpatient setting.

Ashraf MS, Swinker M, Augustino KL, Nobles D, Knupp C, Liles D, Christie J, Ramsey KM.

Infect Control Hosp Epidemiol. 2012 Nov;33(11):1132-6. doi: 10.1086/668021. Epub 2012 Sep 19.

PMID:
23041812
40.

Active surveillance cultures to predict ventilator-associated pneumonia resulting from methicillin-resistant Staphylococcus aureus: is there a role beyond search and destroy?

Toschlog EA, Ramsey KM.

Crit Care Med. 2012 May;40(5):1651-2. doi: 10.1097/CCM.0b013e3182474b27. No abstract available.

PMID:
22511145
41.

Nutrient sensing and the circadian clock.

Peek CB, Ramsey KM, Marcheva B, Bass J.

Trends Endocrinol Metab. 2012 Jul;23(7):312-8. doi: 10.1016/j.tem.2012.02.003. Epub 2012 Mar 16. Review.

42.

Klf15 orchestrates circadian nitrogen homeostasis.

Jeyaraj D, Scheer FA, Ripperger JA, Haldar SM, Lu Y, Prosdocimo DA, Eapen SJ, Eapen BL, Cui Y, Mahabeleshwar GH, Lee HG, Smith MA, Casadesus G, Mintz EM, Sun H, Wang Y, Ramsey KM, Bass J, Shea SA, Albrecht U, Jain MK.

Cell Metab. 2012 Mar 7;15(3):311-23. doi: 10.1016/j.cmet.2012.01.020.

43.

Circadian clocks in fuel harvesting and energy homeostasis.

Ramsey KM, Bass J.

Cold Spring Harb Symp Quant Biol. 2011;76:63-72. doi: 10.1101/sqb.2011.76.010546. Epub 2011 Sep 2. Review.

44.

Utilitarian and lottery theory in age-related macular degeneration.

Ramsey KM.

Can J Ophthalmol. 2011 Aug;46(4):372. doi: 10.1016/j.jcjo.2011.06.020. Epub 2011 Jul 7. No abstract available.

PMID:
21816264
45.

Circadian genes and insulin exocytosis.

Marcheva B, Ramsey KM, Bass J.

Cell Logist. 2011 Jan;1(1):32-36.

46.

Circadian rhythms, sleep, and metabolism.

Huang W, Ramsey KM, Marcheva B, Bass J.

J Clin Invest. 2011 Jun;121(6):2133-41. doi: 10.1172/JCI46043. Epub 2011 Jun 1. Review.

48.

Circadian disruption and metabolic disease: findings from animal models.

Arble DM, Ramsey KM, Bass J, Turek FW.

Best Pract Res Clin Endocrinol Metab. 2010 Oct;24(5):785-800. doi: 10.1016/j.beem.2010.08.003. Review.

49.

Disruption of the clock components CLOCK and BMAL1 leads to hypoinsulinaemia and diabetes.

Marcheva B, Ramsey KM, Buhr ED, Kobayashi Y, Su H, Ko CH, Ivanova G, Omura C, Mo S, Vitaterna MH, Lopez JP, Philipson LH, Bradfield CA, Crosby SD, JeBailey L, Wang X, Takahashi JS, Bass J.

Nature. 2010 Jul 29;466(7306):627-31. doi: 10.1038/nature09253.

50.

MRSA screening may benefit H1N1 patients.

Ramsey KM.

MLO Med Lab Obs. 2010 Feb;42(2):24. No abstract available.

PMID:
20337177

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