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Breakpoint mapping of a novel de novo translocation t(X;20)(q11.1;p13) by positional cloning and long read sequencing.

Dutta UR, Rao SN, Pidugu VK, Vineeth VS, Bhattacherjee A, Bhowmik AD, Ramaswamy SK, Singh KG, Dalal A.

Genomics. 2018 Jul 10. pii: S0888-7543(18)30299-4. doi: 10.1016/j.ygeno.2018.07.005. [Epub ahead of print]


Stem Cell Cytoskeletal Responses to Pulsatile Flow in Heart Valve Tissue Engineering Studies.

Castellanos G, Nasim S, Almora DM, Rath S, Ramaswamy S.

Front Cardiovasc Med. 2018 Jun 5;5:58. doi: 10.3389/fcvm.2018.00058. eCollection 2018.


Macroporous dual compartment hydrogels for minimally invasive transplantation of primary human hepatocytes.

Seale N, Ramaswamy S, Shih YR, Verma I, Varghese S.

Transplantation. 2018 Jun 18. doi: 10.1097/TP.0000000000002330. [Epub ahead of print]


A nonequilibrium force can stabilize 2D active nematics.

Maitra A, Srivastava P, Marchetti MC, Lintuvuori JS, Ramaswamy S, Lenz M.

Proc Natl Acad Sci U S A. 2018 Jul 3;115(27):6934-6939. doi: 10.1073/pnas.1720607115. Epub 2018 Jun 18.


Decreased expression of cell adhesion genes in cancer stem-like cells isolated from primary oral squamous cell carcinomas.

Mishra A, Sriram H, Chandarana P, Tanavde V, Kumar RV, Gopinath A, Govindarajan R, Ramaswamy S, Sadasivam S.

Tumour Biol. 2018 May;40(5):1010428318780859. doi: 10.1177/1010428318780859.


Are Tanycytes the Missing Link Between Type 2 Diabetes and Alzheimer's Disease?

Raikwar SP, Bhagavan SM, Ramaswamy SB, Thangavel R, Dubova I, Selvakumar GP, Ahmed ME, Kempuraj D, Zaheer S, Iyer S, Zaheer A.

Mol Neurobiol. 2018 May 24. doi: 10.1007/s12035-018-1123-8. [Epub ahead of print] Review.


Autologous and Heterologous Cell Therapy for Hemophilia B toward Functional Restoration of Factor IX.

Ramaswamy S, Tonnu N, Menon T, Lewis BM, Green KT, Wampler D, Monahan PE, Verma IM.

Cell Rep. 2018 May 1;23(5):1565-1580. doi: 10.1016/j.celrep.2018.03.121.


Substrate-bound outward-open structure of a Na+-coupled sialic acid symporter reveals a new Na+ site.

Wahlgren WY, Dunevall E, North RA, Paz A, Scalise M, Bisignano P, Bengtsson-Palme J, Goyal P, Claesson E, Caing-Carlsson R, Andersson R, Beis K, Nilsson UJ, Farewell A, Pochini L, Indiveri C, Grabe M, Dobson RCJ, Abramson J, Ramaswamy S, Friemann R.

Nat Commun. 2018 May 1;9(1):1753. doi: 10.1038/s41467-018-04045-7.


AR Expression in Breast Cancer CTCs Associates with Bone Metastases.

Aceto N, Bardia A, Wittner BS, Donaldson MC, O'Keefe R, Engstrom A, Bersani F, Zheng Y, Comaills V, Niederhoffer K, Zhu H, Mackenzie O, Shioda T, Sgroi D, Kapur R, Ting DT, Moy B, Ramaswamy S, Toner M, Haber DA, Maheswaran S.

Mol Cancer Res. 2018 Apr;16(4):720-727. doi: 10.1158/1541-7786.MCR-17-0480. Epub 2018 Feb 16.


Molecular signatures of circulating melanoma cells for monitoring early response to immune checkpoint therapy.

Hong X, Sullivan RJ, Kalinich M, Kwan TT, Giobbie-Hurder A, Pan S, LiCausi JA, Milner JD, Nieman LT, Wittner BS, Ho U, Chen T, Kapur R, Lawrence DP, Flaherty KT, Sequist LV, Ramaswamy S, Miyamoto DT, Lawrence M, Toner M, Isselbacher KJ, Maheswaran S, Haber DA.

Proc Natl Acad Sci U S A. 2018 Mar 6;115(10):2467-2472. doi: 10.1073/pnas.1719264115. Epub 2018 Feb 16.


Low-noise phase of a two-dimensional active nematic system.

Shankar S, Ramaswamy S, Marchetti MC.

Phys Rev E. 2018 Jan;97(1-1):012707. doi: 10.1103/PhysRevE.97.012707.


Automation aided optimization of cloning, expression and purification of enzymes of the bacterial sialic acid catabolic and sialylation pathways enzymes for structural studies.

Bairy S, Gopalan LN, Setty TG, Srinivasachari S, Manjunath L, Kumar JP, Guntupalli SR, Bose S, Nayak V, Ghosh S, Sathyanarayanan N, Caing-Carlsson R, Wahlgren WY, Friemann R, Ramaswamy S, Neerathilingam M.

Microb Biotechnol. 2018 Mar;11(2):420-428. doi: 10.1111/1751-7915.13041. Epub 2018 Jan 17.


Letters to the Editor.

Ramaswamy S, Driscoll D, Smith LM.

Innov Clin Neurosci. 2017 Oct 1;14(9-10):3. eCollection 2017 Sep-Oct. No abstract available.


New Therapy for Refractory Chronic Mechanical Low Back Pain-Restorative Neurostimulation to Activate the Lumbar Multifidus: One Year Results of a Prospective Multicenter Clinical Trial.

Deckers K, De Smedt K, Mitchell B, Vivian D, Russo M, Georgius P, Green M, Vieceli J, Eldabe S, Gulve A, van Buyten JP, Smet I, Mehta V, Ramaswamy S, Baranidharan G, Sullivan R, Gassin R, Rathmell J, Gilligan C.

Neuromodulation. 2018 Jan;21(1):48-55. doi: 10.1111/ner.12741. Epub 2017 Dec 15.


E2F/DP Prevents Cell-Cycle Progression in Endocycling Fat Body Cells by Suppressing dATM Expression.

Guarner A, Morris R, Korenjak M, Boukhali M, Zappia MP, Van Rechem C, Whetstine JR, Ramaswamy S, Zou L, Frolov MV, Haas W, Dyson NJ.

Dev Cell. 2017 Dec 18;43(6):689-703.e5. doi: 10.1016/j.devcel.2017.11.008. Epub 2017 Dec 7.


"Just a spoonful of sugar...": import of sialic acid across bacterial cell membranes.

North RA, Horne CR, Davies JS, Remus DM, Muscroft-Taylor AC, Goyal P, Wahlgren WY, Ramaswamy S, Friemann R, Dobson RCJ.

Biophys Rev. 2018 Apr;10(2):219-227. doi: 10.1007/s12551-017-0343-x. Epub 2017 Dec 8. Review.


Co-Expression of Glia Maturation Factor and Apolipoprotein E4 in Alzheimer's Disease Brain.

Thangavel R, Bhagavan SM, Ramaswamy SB, Surpur S, Govindarajan R, Kempuraj D, Zaheer S, Raikwar S, Ahmed ME, Selvakumar GP, Iyer SS, Zaheer A.

J Alzheimers Dis. 2018;61(2):553-560. doi: 10.3233/JAD-170777.


Using Workers' Compensation Claims Data to Characterize Occupational Injuries in the Commercial Grain Elevator Industry.

Ramaswamy SK, Mosher GA.

J Agric Saf Health. 2017 Jul 31;23(3):203-217. doi: 10.13031/jash.12196.


The Role of Inflammation in Late-Life Post-Traumatic Stress Disorder.

Miller K, Driscoll D, Smith LM, Ramaswamy S.

Mil Med. 2017 Nov;182(11):e1815-e1818. doi: 10.7205/MILMED-D-17-00073.


Use of combined polarization-sensitive optical coherence tomography and Mueller matrix imaging for the polarimetric characterization of excised biological tissue (Erratum).

Chue-Sang J, Bai Y, Stoff S, Straton D, Ramaswamy S, Ramella-Romana JC.

J Biomed Opt. 2017 Oct;22(10):1. doi: 10.1117/1.JBO.22.10.109801.


Unique Maturation Trajectories of Basket and Chandelier Cells in the Neocortex.

Ramaswamy S.

J Neurosci. 2017 Oct 25;37(43):10255-10257. doi: 10.1523/JNEUROSCI.1949-17.2017. No abstract available.


AKT1low Quiescent Cancer Cells Promote Solid Tumor Growth.

Alves CP, Dey-Guha I, Kabraji S, Yeh AC, Talele NP, Solé X, Chowdhury J, Mino-Kenudson M, Loda M, Sgroi D, Borresen-Dale AL, Russnes HG, Ross KN, Ramaswamy S.

Mol Cancer Ther. 2018 Jan;17(1):254-263. doi: 10.1158/1535-7163.MCT-16-0868. Epub 2017 Oct 20.


A "sweet-spot" for fluid-induced oscillations in the conditioning of stem cell-based engineered heart valve tissues.

Williams A, Nasim S, Salinas M, Moshkforoush A, Tsoukias N, Ramaswamy S.

J Biomech. 2017 Dec 8;65:40-48. doi: 10.1016/j.jbiomech.2017.09.035. Epub 2017 Oct 7.


One enzyme, many reactions: structural basis for the various reactions catalyzed by naphthalene 1,2-dioxygenase.

Ferraro DJ, Okerlund A, Brown E, Ramaswamy S.

IUCrJ. 2017 Aug 8;4(Pt 5):648-656. doi: 10.1107/S2052252517008223. eCollection 2017 Sep 1.


Primary Intestinal Lymphangiectasia (Waldmann's Disease) Presenting with Chylous Effusions in a 15-Year-Old.

Surampalli V, Ramaswamy S, Surendran D, Bammigatti C, Swaminathan RP.

J Clin Diagn Res. 2017 Aug;11(8):OD17-OD18. doi: 10.7860/JCDR/2017/29055.10522. Epub 2017 Aug 1.


Distinct Activity Profiles of Somatostatin-Expressing Interneurons in the Neocortex.

Ramaswamy S, Colangelo C, Muller EB.

Front Cell Neurosci. 2017 Sep 11;11:273. doi: 10.3389/fncel.2017.00273. eCollection 2017. No abstract available.


Reconstruction of lignin and hemicelluloses by aqueous ethanol anti-solvents to improve the ionic liquid-acid pretreatment performance of Arundo donax Linn.

You T, Wang R, Zhang X, Ramaswamy S, Xu F.

Biotechnol Bioeng. 2018 Jan;115(1):82-91. doi: 10.1002/bit.26457. Epub 2017 Oct 23.


The testicular transcriptome associated with spermatogonia differentiation initiated by gonadotrophin stimulation in the juvenile rhesus monkey (Macaca mulatta).

Ramaswamy S, Walker WH, Aliberti P, Sethi R, Marshall GR, Smith A, Nourashrafeddin S, Belgorosky A, Chandran UR, Hedger MP, Plant TM.

Hum Reprod. 2017 Oct 1;32(10):2088-2100. doi: 10.1093/humrep/dex270.


A Double-Blind, Placebo-Controlled Randomized Trial of Vilazodone in the Treatment of Posttraumatic Stress Disorder and Comorbid Depression.

Ramaswamy S, Driscoll D, Reist C, Smith LM, Albers LJ, Rose J, Nguyen L, Monga V, Doria R, Hollifield M.

Prim Care Companion CNS Disord. 2017 Aug 24;19(4). pii: 17m02138. doi: 10.4088/PCC.17m02138.


Our failure to protect sexually abused children: Where is our 'willing suspension of disbelief'?

Ramaswamy S, Seshadri S.

Indian J Psychiatry. 2017 Apr-Jun;59(2):233-235. doi: 10.4103/psychiatry.IndianJPsychiatry_123_17. No abstract available.


AKT1low quiescent cancer cells persist after neoadjuvant chemotherapy in triple negative breast cancer.

Kabraji S, Solé X, Huang Y, Bango C, Bowden M, Bardia A, Sgroi D, Loda M, Ramaswamy S.

Breast Cancer Res. 2017 Aug 1;19(1):88. doi: 10.1186/s13058-017-0877-7.


Effect of Antidepressant Switching vs Augmentation on Remission Among Patients With Major Depressive Disorder Unresponsive to Antidepressant Treatment: The VAST-D Randomized Clinical Trial.

Mohamed S, Johnson GR, Chen P, Hicks PB, Davis LL, Yoon J, Gleason TC, Vertrees JE, Weingart K, Tal I, Scrymgeour A, Lawrence DD, Planeta B, Thase ME, Huang GD, Zisook S; and the VAST-D Investigators, Rao SD, Pilkinton PD, Wilcox JA, Iranmanesh A, Sapra M, Jurjus G, Michalets JP, Aslam M, Beresford T, Anderson KD, Fernando R, Ramaswamy S, Kasckow J, Westermeyer J, Yoon G, D'Souza DC, Larson G, Anderson WG, Klatt M, Fareed A, Thompson SI, Carrera CJ, Williams SS, Juergens TM, Albers LJ, Nasdahl CS, Villarreal G, Winston JL, Nogues CA, Connolly KR, Tapp A, Jones KA, Khatkhate G, Marri S, Suppes T, LaMotte J, Hurley R, Mayeda AR, Niculescu AB 3rd, Fischer BA, Loreck DJ, Rosenlicht N, Lieske S, Finkel MS, Little JT.

JAMA. 2017 Jul 11;318(2):132-145. doi: 10.1001/jama.2017.8036.


Development and validation of an electrochemiluminescent ELISA for quantitation of oral insulin tregopil in diabetes mellitus serum.

Ramaswamy SG, Nayak VG, Jha SK, Hegde V, Waichale VS, Melarkode R, Chirmule N, Rao AU, Sengupta N.

Bioanalysis. 2017 Jul;9(13):975-986. doi: 10.4155/bio-2017-0020. Epub 2017 Jul 10.


Formulation and characterization of chitosan encapsulated phytoconstituents of curcumin and rutin nanoparticles.

Ramaswamy S, Dwarampudi LP, Kadiyala M, Kuppuswamy G, Veera Venkata Satyanarayana Reddy K, Kumar CKA, Paranjothy M.

Int J Biol Macromol. 2017 Nov;104(Pt B):1807-1812. doi: 10.1016/j.ijbiomac.2017.06.112. Epub 2017 Jun 29.


Horse Liver Alcohol Dehydrogenase: Zinc Coordination and Catalysis.

Plapp BV, Savarimuthu BR, Ferraro DJ, Rubach JK, Brown EN, Ramaswamy S.

Biochemistry. 2017 Jul 18;56(28):3632-3646. doi: 10.1021/acs.biochem.7b00446. Epub 2017 Jul 7.


Morphological Diversity Strongly Constrains Synaptic Connectivity and Plasticity.

Reimann MW, Horlemann AL, Ramaswamy S, Muller EB, Markram H.

Cereb Cortex. 2017 Sep 1;27(9):4570-4585. doi: 10.1093/cercor/bhx150.


Diagnosis and management of dementia with Lewy bodies: Fourth consensus report of the DLB Consortium.

McKeith IG, Boeve BF, Dickson DW, Halliday G, Taylor JP, Weintraub D, Aarsland D, Galvin J, Attems J, Ballard CG, Bayston A, Beach TG, Blanc F, Bohnen N, Bonanni L, Bras J, Brundin P, Burn D, Chen-Plotkin A, Duda JE, El-Agnaf O, Feldman H, Ferman TJ, Ffytche D, Fujishiro H, Galasko D, Goldman JG, Gomperts SN, Graff-Radford NR, Honig LS, Iranzo A, Kantarci K, Kaufer D, Kukull W, Lee VMY, Leverenz JB, Lewis S, Lippa C, Lunde A, Masellis M, Masliah E, McLean P, Mollenhauer B, Montine TJ, Moreno E, Mori E, Murray M, O'Brien JT, Orimo S, Postuma RB, Ramaswamy S, Ross OA, Salmon DP, Singleton A, Taylor A, Thomas A, Tiraboschi P, Toledo JB, Trojanowski JQ, Tsuang D, Walker Z, Yamada M, Kosaka K.

Neurology. 2017 Jul 4;89(1):88-100. doi: 10.1212/WNL.0000000000004058. Epub 2017 Jun 7. Review.


Rich cell-type-specific network topology in neocortical microcircuitry.

Gal E, London M, Globerson A, Ramaswamy S, Reimann MW, Muller E, Markram H, Segev I.

Nat Neurosci. 2017 Jul;20(7):1004-1013. doi: 10.1038/nn.4576. Epub 2017 Jun 5.


Crystal structure of N-acetylmannosamine kinase from Fusobacterium nucleatum.

Caing-Carlsson R, Goyal P, Sharma A, Ghosh S, Setty TG, North RA, Friemann R, Ramaswamy S.

Acta Crystallogr F Struct Biol Commun. 2017 Jun 1;73(Pt 6):356-362. doi: 10.1107/S2053230X17007439. Epub 2017 May 31.


Financial Burden Faced by Families due to Out-of-pocket Expenses during the Treatment of their Cancer Children: An Indian Perspective.

Sneha LM, Sai J, Ashwini S, Ramaswamy S, Rajan M, Scott JX.

Indian J Med Paediatr Oncol. 2017 Jan-Mar;38(1):4-9. doi: 10.4103/0971-5851.203493.


Structural and functional studies of ferredoxin and oxygenase components of 3-nitrotoluene dioxygenase from Diaphorobacter sp. strain DS2.

Kumari A, Singh D, Ramaswamy S, Ramanathan G.

PLoS One. 2017 Apr 27;12(4):e0176398. doi: 10.1371/journal.pone.0176398. eCollection 2017.


Integrin β1 activation induces an anti-melanoma host response.

Ritsma L, Dey-Guha I, Talele N, Sole X, Salony, Chowdhury J, Ross KN, Ramaswamy S.

PLoS One. 2017 Apr 27;12(4):e0175300. doi: 10.1371/journal.pone.0175300. eCollection 2017.


Hydrodynamic instabilities in active cholesteric liquid crystals.

Whitfield CA, Adhyapak TC, Tiribocchi A, Alexander GP, Marenduzzo D, Ramaswamy S.

Eur Phys J E Soft Matter. 2017 Apr;40(4):50. doi: 10.1140/epje/i2017-11536-2. Epub 2017 Apr 24.


Systematic functional perturbations uncover a prognostic genetic network driving human breast cancer.

Gallenne T, Ross KN, Visser NL, Salony, Desmet CJ, Wittner BS, Wessels LFA, Ramaswamy S, Peeper DS.

Oncotarget. 2017 Mar 15;8(13):20572-20587. doi: 10.18632/oncotarget.16244.


The "black evil" affecting patients with diabetes: a case of rhino orbito cerebral mucormycosis causing Garcin syndrome.

Narayanan S, Panarkandy G, Subramaniam G, Radhakrishnan C, Thulaseedharan NK, Manikath N, Ramaswamy S, Radhakrishnan S, Ekkalayil D.

Infect Drug Resist. 2017 Mar 28;10:103-108. doi: 10.2147/IDR.S130926. eCollection 2017.


Heart rate variability as a biomarker for sedation depth estimation in ICU patients.

Nagaraj SB, Ramaswamy SM, Biswal S, Boyle EJ, Zhou DW, Mcclain LM, Rosenthal ES, Purdon PL, Westover MB.

Conf Proc IEEE Eng Med Biol Soc. 2016 Aug;2016:6397-6400. doi: 10.1109/EMBC.2016.7592192.


ATR inhibition disrupts rewired homologous recombination and fork protection pathways in PARP inhibitor-resistant BRCA-deficient cancer cells.

Yazinski SA, Comaills V, Buisson R, Genois MM, Nguyen HD, Ho CK, Todorova Kwan T, Morris R, Lauffer S, Nussenzweig A, Ramaswamy S, Benes CH, Haber DA, Maheswaran S, Birrer MJ, Zou L.

Genes Dev. 2017 Feb 1;31(3):318-332. doi: 10.1101/gad.290957.116. Epub 2017 Feb 27.


Systemic delivery of factor IX messenger RNA for protein replacement therapy.

Ramaswamy S, Tonnu N, Tachikawa K, Limphong P, Vega JB, Karmali PP, Chivukula P, Verma IM.

Proc Natl Acad Sci U S A. 2017 Mar 7;114(10):E1941-E1950. doi: 10.1073/pnas.1619653114. Epub 2017 Feb 15.


Expression of β-globin by cancer cells promotes cell survival during blood-borne dissemination.

Zheng Y, Miyamoto DT, Wittner BS, Sullivan JP, Aceto N, Jordan NV, Yu M, Karabacak NM, Comaills V, Morris R, Desai R, Desai N, Emmons E, Milner JD, Lee RJ, Wu CL, Sequist LV, Haas W, Ting DT, Toner M, Ramaswamy S, Maheswaran S, Haber DA.

Nat Commun. 2017 Feb 9;8:14344. doi: 10.1038/ncomms14344.

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