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Preoperative ultrasonography for tumor thickness evaluation in guiding management in patients with early oral tongue squamous cell carcinoma.

Nair AV, Meera M, Rajamma BM, Anirudh S, Nazer PK, Ramachandran PV.

Indian J Radiol Imaging. 2018 Apr-Jun;28(2):140-145. doi: 10.4103/ijri.IJRI_151_17.


Cis-regulatory determinants of MyoD function.

Soleimani VD, Nguyen D, Ramachandran P, Palidwor GA, Porter CJ, Yin H, Perkins TJ, Rudnicki MA.

Nucleic Acids Res. 2018 Jul 17. doi: 10.1093/nar/gky388. [Epub ahead of print]


Monitoring whole-lung lavage using lung ultrasound: The changing phases of the lung.

Ramachandran P, Chaudhury A, Devaraj U, Maheshwari KU, D'Souza G.

Lung India. 2018 Jul-Aug;35(4):350-353. doi: 10.4103/lungindia.lungindia_344_17.


Obstructive Sleep Apnea in a rural population in South India: Feasibility of health care workers to administer level III sleep study.

Pinto AM, Devaraj U, Ramachandran P, Joseph B, D'Souza GA.

Lung India. 2018 Jul-Aug;35(4):301-306. doi: 10.4103/lungindia.lungindia_433_17.


Characterization of the Microbiota of Oyster Larvae (Crassostrea virginica) and Tank Water from an Aquaculture System with High and Low Larval Survival Rates.

Ramachandran P, Reed E, Commichaux S, Strain E, Depaola A, Rikard S, Ottesen A.

Genome Announc. 2018 Jun 21;6(25). pii: e00597-18. doi: 10.1128/genomeA.00597-18.


Sequencing the Vine of the Soul: Full Chloroplast Genome Sequence of Banisteriopsis caapi.

Ramachandran P, Zhang N, McLaughlin WB, Luo Y, Handy S, Duke JA, Vasquez R, Ottesen A.

Genome Announc. 2018 Jun 21;6(25). pii: e00203-18. doi: 10.1128/genomeA.00203-18.


Time trends in prevalence of anaemia in pregnancy.

Kalaivani K, Ramachandran P.

Indian J Med Res. 2018 Mar;147(3):268-277. doi: 10.4103/ijmr.IJMR_1730_16.


Exploring the Microbiome of Callinectes sapidus (Maryland Blue Crab).

Ramachandran P, Reed E, Ottesen A.

Genome Announc. 2018 May 31;6(22). pii: e00466-18. doi: 10.1128/genomeA.00466-18.


Metagenomic Description of Preenrichment and Postenrichment of Recalled Chapati Atta Flour Using a Shotgun Sequencing Approach.

Lusk Pfefer T, Ramachandran P, Reed E, Kase JA, Ottesen A.

Genome Announc. 2018 May 24;6(21). pii: e00305-18. doi: 10.1128/genomeA.00305-18.


Preoperative Aortic Arch Size and Late Outcome After Coarctation Repair by Lateral Thoracotomy.

Ramachandran P, Khoury PR, Beekman RH, Michelfelder EC, Manning PB, Tweddell JS, Cnota JF.

Ann Thorac Surg. 2018 Aug;106(2):575-580. doi: 10.1016/j.athoracsur.2018.03.084. Epub 2018 May 5.


Breathless with stones!

Devaraj U, Ramachandran P, Maheswari U.

Lung India. 2018 May-Jun;35(3):265-267. doi: 10.4103/lungindia.lungindia_101_17. No abstract available.


National Green Tribunal of India-an observation from environmental judgements.

Rengarajan S, Palaniyappan D, Ramachandran P, Ramachandran R.

Environ Sci Pollut Res Int. 2018 Apr;25(12):11313-11318. doi: 10.1007/s11356-018-1763-2. Epub 2018 Mar 23. No abstract available.


Shifts in spinach microbial communities after chlorine washing and storage at compliant and abusive temperatures.

Gu G, Ottesen A, Bolten S, Ramachandran P, Reed E, Rideout S, Luo Y, Patel J, Brown E, Nou X.

Food Microbiol. 2018 Aug;73:73-84. doi: 10.1016/ Epub 2018 Jan 4.


Transcriptome analysis of embryonic domains in Norway spruce reveals potential regulators of suspensor cell death.

Reza SH, Delhomme N, Street NR, Ramachandran P, Dalman K, Nilsson O, Minina EA, Bozhkov PV.

PLoS One. 2018 Mar 2;13(3):e0192945. doi: 10.1371/journal.pone.0192945. eCollection 2018.


Use of induced pluripotent stem cell models to probe the pathogenesis of Choroideremia and to develop a potential treatment.

Duong TT, Vasireddy V, Ramachandran P, Herrera PS, Leo L, Merkel C, Bennett J, Mills JA.

Stem Cell Res. 2018 Mar;27:140-150. doi: 10.1016/j.scr.2018.01.009. Epub 2018 Jan 28.


Engineering of a miniaturized, robotic clinical laboratory.

Nourse MB, Engel K, Anekal SG, Bailey JA, Bhatta P, Bhave DP, Chandrasekaran S, Chen Y, Chow S, Das U, Galil E, Gong X, Gessert SF, Ha KD, Hu R, Hyland L, Jammalamadaka A, Jayasurya K, Kemp TM, Kim AN, Lee LS, Liu YL, Nguyen A, O'Leary J, Pangarkar CH, Patel PJ, Quon K, Ramachandran PL, Rappaport AR, Roy J, Sapida JF, Sergeev NV, Shee C, Shenoy R, Sivaraman S, Sosa-Padilla B, Tran L, Trent A, Waggoner TC, Wodziak D, Yuan A, Zhao P, Young DL, Robertson CR, Holmes EA.

Bioeng Transl Med. 2018 Jan 19;3(1):58-70. doi: 10.1002/btm2.10084. eCollection 2018 Jan.


Continuous root xylem formation and vascular acclimation to water deficit involves endodermal ABA signalling via miR165.

Ramachandran P, Wang G, Augstein F, de Vries J, Carlsbecker A.

Development. 2018 Feb 5;145(3). pii: dev159202. doi: 10.1242/dev.159202.


Studies of macrophage therapy for cirrhosis - From mice to men.

Thomas JA, Ramachandran P, Forbes SJ.

J Hepatol. 2018 May;68(5):1090-1091. doi: 10.1016/j.jhep.2017.11.043. Epub 2018 Jan 6. No abstract available.


Evaluation and Performance of ArcCheck and Film using Gamma Criteria in Pre-treatment Quality Assurance of Stereotactic Ablative Radiotherapy.

Ramachandran P, Tajaldeen A, Taylor D, Wanigaratne D, Roozen K, Geso M.

J Med Phys. 2017 Oct-Dec;42(4):251-257. doi: 10.4103/jmp.JMP_132_16.


11Beta-hydroxysteroid dehydrogenase-1 deficiency or inhibition enhances hepatic myofibroblast activation in murine liver fibrosis.

Zou X, Ramachandran P, Kendall TJ, Pellicoro A, Dora E, Aucott RL, Manwani K, Man TY, Chapman KE, Henderson NC, Forbes SJ, Webster SP, Iredale JP, Walker BR, Michailidou Z.

Hepatology. 2018 Jun;67(6):2167-2181. doi: 10.1002/hep.29734. Epub 2018 Feb 22.


An updated checklist of Echinoderms from Indian waters.

Samuel VKD, Krishnan P, Sreeraj CR, Chamundeeswari K, Parthiban C, Sekar V, Patro S, Saravanan R, Abhilash KR, Ramachandran P, Ramesh R.

Zootaxa. 2017 Nov 27;4354(1):1-68. doi: 10.11646/zootaxa.4354.1.1.


Genomics of foodborne pathogens for microbial food safety.

Allard MW, Bell R, Ferreira CM, Gonzalez-Escalona N, Hoffmann M, Muruvanda T, Ottesen A, Ramachandran P, Reed E, Sharma S, Stevens E, Timme R, Zheng J, Brown EW.

Curr Opin Biotechnol. 2018 Feb;49:224-229. doi: 10.1016/j.copbio.2017.11.002. Epub 2017 Nov 21. Review.


Expression and characterization of the soluble form of recombinant mature HSV-2 glycoprotein G for use in anti-HSV-2 IgG serodiagnostic immunoassay.

Jun W, Hu R, Hyland L, Crandall D, Ramachandran P, Pangarkar C, Sivaraman S, Haghiri B.

J Virol Methods. 2018 Feb;252:65-69. doi: 10.1016/j.jviromet.2017.10.021. Epub 2017 Oct 28.


Research priorities in Maternal, Newborn, & Child Health & Nutrition for India: An Indian Council of Medical Research-INCLEN Initiative.

Arora NK, Swaminathan S, Mohapatra A, Gopalan HS, Katoch VM, Bhan MK, Rasaily R, Shekhar C, Thavaraj V, Roy M, Das MK, Wazny K, Kumar R, Khera A, Bhatla N, Jain V, Laxmaiah A, Nair MKC, Paul VK, Ramachandran P, Ramji S, Vaidya U, Verma IC, Shah D, Bahl R, Qazi S, Rudan I, Black RE; ICMR INCLEN Research Priority Setting Network.

Indian J Med Res. 2017 May;145(5):611-622. doi: 10.4103/ijmr.IJMR_139_17.


Uncovering robust patterns of microRNA co-expression across cancers using Bayesian Relevance Networks.

Ramachandran P, Sánchez-Taltavull D, Perkins TJ.

PLoS One. 2017 Aug 17;12(8):e0183103. doi: 10.1371/journal.pone.0183103. eCollection 2017.


Microbiomes of American Oysters (Crassostrea virginica) Harvested from Two Sites in the Chesapeake Bay.

Ossai S, Ramachandran P, Ottesen A, Reed E, DePaola A, Parveen S.

Genome Announc. 2017 Jul 27;5(30). pii: e00729-17. doi: 10.1128/genomeA.00729-17.


Development of a Reference Standard Library of Chloroplast Genome Sequences, GenomeTrakrCP.

Zhang N, Ramachandran P, Wen J, Duke JA, Metzman H, McLaughlin W, Ottesen AR, Timme RE, Handy SM.

Planta Med. 2017 Dec;83(18):1420-1430. doi: 10.1055/s-0043-113449. Epub 2017 Jun 26.


Surface dose measurements in and out of field: Implications for breast radiotherapy with megavoltage photon beams.

Lonski P, Ramachandran P, Franich R, Kron T.

Z Med Phys. 2017 Dec;27(4):318-323. doi: 10.1016/j.zemedi.2017.05.002. Epub 2017 Jun 7.


Reconstructing a herbivore's diet using a novel rbcL DNA mini-barcode for plants.

Erickson DL, Reed E, Ramachandran P, Bourg NA, McShea WJ, Ottesen A.

AoB Plants. 2017 Apr 21;9(3):plx015. doi: 10.1093/aobpla/plx015. eCollection 2017 May.


New era of electronic brachytherapy.

Ramachandran P.

World J Radiol. 2017 Apr 28;9(4):148-154. doi: 10.4329/wjr.v9.i4.148.


Protocols for Visually Guided Navigation Assessment of Efficacy of Retina-Directed Cell or Gene Therapy in Canines.

Aravand P, Ramachandran PS, Schpylchak I, Phelps NT, Nikonov S, Bennett J.

Front Neurosci. 2017 Apr 26;11:215. doi: 10.3389/fnins.2017.00215. eCollection 2017.


The stroke gap.

Ramachandran P, Burrow J.

Med J Aust. 2017 May 1;206(8):370. No abstract available.


Antifibrotics in chronic liver disease: tractable targets and translational challenges.

Ramachandran P, Henderson NC.

Lancet Gastroenterol Hepatol. 2016 Dec;1(4):328-340. doi: 10.1016/S2468-1253(16)30110-8. Epub 2016 Nov 10. Review.


Undiagnosed Obstructive Sleep Apnea and Postoperative Outcomes: A Prospective Observational Study.

Devaraj U, Rajagopala S, Kumar A, Ramachandran P, Devereaux PJ, D'Souza GA.

Respiration. 2017;94(1):18-25. doi: 10.1159/000470914. Epub 2017 Apr 11.


Seagrass metabolism and carbon dynamics in a tropical coastal embayment.

Ganguly D, Singh G, Ramachandran P, Selvam AP, Banerjee K, Ramachandran R.

Ambio. 2017 Oct;46(6):667-679. doi: 10.1007/s13280-017-0916-8. Epub 2017 Mar 31.


Sphingosine-1-Phosphate Prevents Egress of Hematopoietic Stem Cells From Liver to Reduce Fibrosis.

King A, Houlihan DD, Kavanagh D, Haldar D, Luu N, Owen A, Suresh S, Than NN, Reynolds G, Penny J, Sumption H, Ramachandran P, Henderson NC, Kalia N, Frampton J, Adams DH, Newsome PN.

Gastroenterology. 2017 Jul;153(1):233-248.e16. doi: 10.1053/j.gastro.2017.03.022. Epub 2017 Mar 28.


Adult food borne botulism in Australia: The only 2 cases from the last 15years.

Ramachandran P, Chan E, Poon M, Tu HTH, Davis JM, Eisen D, Marriott M.

J Clin Neurosci. 2017 Jul;41:86-87. doi: 10.1016/j.jocn.2017.03.010. Epub 2017 Mar 24. No abstract available.


An analysis of Echinacea chloroplast genomes: Implications for future botanical identification.

Zhang N, Erickson DL, Ramachandran P, Ottesen AR, Timme RE, Funk VA, Luo Y, Handy SM.

Sci Rep. 2017 Mar 16;7(1):216. doi: 10.1038/s41598-017-00321-6.


Building Community Through a #pulmcc Twitter Chat to Advocate for Pulmonary, Critical Care, and Sleep.

Carroll CL, Bruno K, Ramachandran P.

Chest. 2017 Aug;152(2):402-409. doi: 10.1016/j.chest.2017.03.003. Epub 2017 Mar 14.


Serelaxin as a potential treatment for renal dysfunction in cirrhosis: Preclinical evaluation and results of a randomized phase 2 trial.

Snowdon VK, Lachlan NJ, Hoy AM, Hadoke PW, Semple SI, Patel D, Mungall W, Kendall TJ, Thomson A, Lennen RJ, Jansen MA, Moran CM, Pellicoro A, Ramachandran P, Shaw I, Aucott RL, Severin T, Saini R, Pak J, Yates D, Dongre N, Duffield JS, Webb DJ, Iredale JP, Hayes PC, Fallowfield JA.

PLoS Med. 2017 Feb 28;14(2):e1002248. doi: 10.1371/journal.pmed.1002248. eCollection 2017 Feb.


Anomalous Single Coronary Artery Presenting with Acute Myocardial Infarction.

Kamana VK, Ramachandran P, Krishnan AM, Chowdary RK, Malpe UP.

J Clin Diagn Res. 2016 Dec;10(12):OD01-OD02. doi: 10.7860/JCDR/2016/20599.8977. Epub 2016 Dec 1.


The Northern Territory, Australia.

Ramachandran P.

Pract Neurol. 2017 Apr;17(2):130-132. doi: 10.1136/practneurol-2016-001563. Epub 2017 Feb 14. No abstract available.


E3 ubiquitin ligase Mule targets β-catenin under conditions of hyperactive Wnt signaling.

Dominguez-Brauer C, Khatun R, Elia AJ, Thu KL, Ramachandran P, Baniasadi SP, Hao Z, Jones LD, Haight J, Sheng Y, Mak TW.

Proc Natl Acad Sci U S A. 2017 Feb 14;114(7):E1148-E1157. doi: 10.1073/pnas.1621355114. Epub 2017 Jan 30.


A Rare Case of Perinatal Intrarenal Neuroblastoma.

Solmuthu Azhagan S, Srinivasan A, Rajendran S, Ravinder D, Yadav R, Ramachandran P, Vij M, Xavier Scott J.

J Pediatr Hematol Oncol. 2017 May;39(4):e216-e218. doi: 10.1097/MPH.0000000000000775.


Geographical miss of the prostate during image-guided radiotherapy with a 6-mm posterior expansion margin.

Oates R, Jones D, Foroudi F, Gill S, Ramachandran P, Schneider M, Lim Joon M, Kron T.

J Med Radiat Sci. 2017 Jun;64(2):97-105. doi: 10.1002/jmrs.186. Epub 2016 Nov 8.


Enrichment dynamics of Listeria monocytogenes and the associated microbiome from naturally contaminated ice cream linked to a listeriosis outbreak.

Ottesen A, Ramachandran P, Reed E, White JR, Hasan N, Subramanian P, Ryan G, Jarvis K, Grim C, Daquiqan N, Hanes D, Allard M, Colwell R, Brown E, Chen Y.

BMC Microbiol. 2016 Nov 16;16(1):275.


MIPEP recessive variants cause a syndrome of left ventricular non-compaction, hypotonia, and infantile death.

Eldomery MK, Akdemir ZC, Vögtle FN, Charng WL, Mulica P, Rosenfeld JA, Gambin T, Gu S, Burrage LC, Al Shamsi A, Penney S, Jhangiani SN, Zimmerman HH, Muzny DM, Wang X, Tang J, Medikonda R, Ramachandran PV, Wong LJ, Boerwinkle E, Gibbs RA, Eng CM, Lalani SR, Hertecant J, Rodenburg RJ, Abdul-Rahman OA, Yang Y, Xia F, Wang MC, Lupski JR, Meisinger C, Sutton VR.

Genome Med. 2016 Nov 1;8(1):106.


Class III HD-ZIPs govern vascular cell fate: an HD view on patterning and differentiation.

Ramachandran P, Carlsbecker A, Etchells JP.

J Exp Bot. 2017 Jan;68(1):55-69. doi: 10.1093/jxb/erw370. Epub 2016 Oct 7. Review.


Multidisciplinary management of hepatoblastoma in children: Experience from a developing country.

Shanmugam N, Scott JX, Kumar V, Vij M, Ramachandran P, Narasimhan G, Reddy MS, Kota V, Munirathnam D, Kelgeri C, Sundaram K, Rela M.

Pediatr Blood Cancer. 2017 Mar;64(3). doi: 10.1002/pbc.26249. Epub 2016 Oct 26.


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