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Items: 40

1.

Uncovering Natural Longevity Alleles from Intercrossed Pools of Aging Fission Yeast Cells.

Ellis DA, Mustonen V, Rodríguez-López M, Rallis C, Malecki M, Jeffares DC, Bähler J.

Genetics. 2018 Oct;210(2):733-744. doi: 10.1534/genetics.118.301262. Epub 2018 Aug 2.

2.

Long noncoding RNA repertoire and targeting by nuclear exosome, cytoplasmic exonuclease, and RNAi in fission yeast.

Atkinson SR, Marguerat S, Bitton DA, Rodríguez-López M, Rallis C, Lemay JF, Cotobal C, Malecki M, Smialowski P, Mata J, Korber P, Bachand F, Bähler J.

RNA. 2018 Sep;24(9):1195-1213. doi: 10.1261/rna.065524.118. Epub 2018 Jun 18.

3.

RNA metabolism is the primary target of formamide in vivo.

Hoyos-Manchado R, Reyes-Martín F, Rallis C, Gamero-Estévez E, Rodríguez-Gómez P, Quintero-Blanco J, Bähler J, Jiménez J, Tallada VA.

Sci Rep. 2017 Nov 21;7(1):15895. doi: 10.1038/s41598-017-16291-8.

5.

The TOR Signaling Pathway in Spatial and Temporal Control of Cell Size and Growth.

Gonzalez S, Rallis C.

Front Cell Dev Biol. 2017 Jun 7;5:61. doi: 10.3389/fcell.2017.00061. eCollection 2017. Review.

6.
7.

Transient structural variations have strong effects on quantitative traits and reproductive isolation in fission yeast.

Jeffares DC, Jolly C, Hoti M, Speed D, Shaw L, Rallis C, Balloux F, Dessimoz C, Bähler J, Sedlazeck FJ.

Nat Commun. 2017 Jan 24;8:14061. doi: 10.1038/ncomms14061.

8.

Functional and regulatory profiling of energy metabolism in fission yeast.

Malecki M, Bitton DA, Rodríguez-López M, Rallis C, Calavia NG, Smith GC, Bähler J.

Genome Biol. 2016 Nov 25;17(1):240.

9.

Spotsizer: High-throughput quantitative analysis of microbial growth.

Bischof L, Převorovský M, Rallis C, Jeffares DC, Arzhaeva Y, Bähler J.

Biotechniques. 2016 Oct 1;61(4):191-201. doi: 10.2144/000114459.

10.

Identification of nuclear genes affecting 2-Deoxyglucose resistance in Schizosaccharomyces pombe.

Vishwanatha A, Rallis C, Bevkal Subramanyaswamy S, D'Souza CJ, Bähler J, Schweingruber ME.

FEMS Yeast Res. 2016 Sep;16(6). pii: fow061. doi: 10.1093/femsyr/fow061. Epub 2016 Jul 31.

11.

Php4 Is a Key Player for Iron Economy in Meiotic and Sporulating Cells.

Brault A, Rallis C, Normant V, Garant JM, Bähler J, Labbé S.

G3 (Bethesda). 2016 Oct 13;6(10):3077-3095. doi: 10.1534/g3.116.031898.

12.

Increasing extracellular H2O2 produces a bi-phasic response in intracellular H2O2, with peroxiredoxin hyperoxidation only triggered once the cellular H2O2-buffering capacity is overwhelmed.

Tomalin LE, Day AM, Underwood ZE, Smith GR, Dalle Pezze P, Rallis C, Patel W, Dickinson BC, Bähler J, Brewer TF, Chang CJ, Shanley DP, Veal EA.

Free Radic Biol Med. 2016 Jun;95:333-48. doi: 10.1016/j.freeradbiomed.2016.02.035. Epub 2016 Mar 2.

13.

A central role for TOR signalling in a yeast model for juvenile CLN3 disease.

Bond ME, Brown R, Rallis C, Bähler J, Mole SE.

Microb Cell. 2015 Nov 11;2(12):466-480. doi: 10.15698/mic2015.12.241.

14.

Cell-based screens and phenomics with fission yeast.

Rallis C, Bähler J.

Crit Rev Biochem Mol Biol. 2016;51(2):86-95. doi: 10.3109/10409238.2015.1103205. Epub 2015 Nov 2. Review.

PMID:
26523839
15.

Widespread exon skipping triggers degradation by nuclear RNA surveillance in fission yeast.

Bitton DA, Atkinson SR, Rallis C, Smith GC, Ellis DA, Chen YY, Malecki M, Codlin S, Lemay JF, Cotobal C, Bachand F, Marguerat S, Mata J, Bähler J.

Genome Res. 2015 Jun;25(6):884-96. doi: 10.1101/gr.185371.114. Epub 2015 Apr 16.

16.

The genomic and phenotypic diversity of Schizosaccharomyces pombe.

Jeffares DC, Rallis C, Rieux A, Speed D, Převorovský M, Mourier T, Marsellach FX, Iqbal Z, Lau W, Cheng TM, Pracana R, Mülleder M, Lawson JL, Chessel A, Bala S, Hellenthal G, O'Fallon B, Keane T, Simpson JT, Bischof L, Tomiczek B, Bitton DA, Sideri T, Codlin S, Hellberg JE, van Trigt L, Jeffery L, Li JJ, Atkinson S, Thodberg M, Febrer M, McLay K, Drou N, Brown W, Hayles J, Carazo Salas RE, Ralser M, Maniatis N, Balding DJ, Balloux F, Durbin R, Bähler J.

Nat Genet. 2015 Mar;47(3):235-41. doi: 10.1038/ng.3215. Epub 2015 Feb 9.

17.

Parallel profiling of fission yeast deletion mutants for proliferation and for lifespan during long-term quiescence.

Sideri T, Rallis C, Bitton DA, Lages BM, Suo F, Rodríguez-López M, Du LL, Bähler J.

G3 (Bethesda). 2014 Dec 1;5(1):145-55. doi: 10.1534/g3.114.014415.

18.

Incorporating real time velocity map image reconstruction into closed-loop coherent control.

Rallis CE, Burwitz TG, Andrews PR, Zohrabi M, Averin R, De S, Bergues B, Jochim B, Voznyuk AV, Gregerson N, Gaire B, Znakovskaya I, McKenna J, Carnes KD, Kling MF, Ben-Itzhak I, Wells E.

Rev Sci Instrum. 2014 Nov;85(11):113105. doi: 10.1063/1.4899267.

19.

Lithium suppresses Aβ pathology by inhibiting translation in an adult Drosophila model of Alzheimer's disease.

Sofola-Adesakin O, Castillo-Quan JI, Rallis C, Tain LS, Bjedov I, Rogers I, Li L, Martinez P, Khericha M, Cabecinha M, Bähler J, Partridge L.

Front Aging Neurosci. 2014 Jul 30;6:190. doi: 10.3389/fnagi.2014.00190. eCollection 2014.

20.

LaSSO, a strategy for genome-wide mapping of intronic lariats and branch points using RNA-seq.

Bitton DA, Rallis C, Jeffares DC, Smith GC, Chen YY, Codlin S, Marguerat S, Bähler J.

Genome Res. 2014 Jul;24(7):1169-79. doi: 10.1101/gr.166819.113. Epub 2014 Apr 7.

21.

Systematic screen for mutants resistant to TORC1 inhibition in fission yeast reveals genes involved in cellular ageing and growth.

Rallis C, López-Maury L, Georgescu T, Pancaldi V, Bähler J.

Biol Open. 2014 Feb 15;3(2):161-71. doi: 10.1242/bio.20147245.

22.

Adaptive strong-field control of chemical dynamics guided by three-dimensional momentum imaging.

Wells E, Rallis CE, Zohrabi M, Siemering R, Jochim B, Andrews PR, Ablikim U, Gaire B, De S, Carnes KD, Bergues B, de Vivie-Riedle R, Kling MF, Ben-Itzhak I.

Nat Commun. 2013;4:2895. doi: 10.1038/ncomms3895.

23.

Inhibition of TORC1 signaling and increased lifespan: gained in translation?

Rallis C, Bähler J.

Aging (Albany NY). 2013 May;5(5):335-6. No abstract available.

24.

TORC1 signaling inhibition by rapamycin and caffeine affect lifespan, global gene expression, and cell proliferation of fission yeast.

Rallis C, Codlin S, Bähler J.

Aging Cell. 2013 Aug;12(4):563-73. doi: 10.1111/acel.12080. Epub 2013 May 2.

25.

Predicting the fission yeast protein interaction network.

Pancaldi V, Saraç OS, Rallis C, McLean JR, Převorovský M, Gould K, Beyer A, Bähler J.

G3 (Bethesda). 2012 Apr;2(4):453-67. doi: 10.1534/g3.111.001560. Epub 2012 Apr 1.

26.

Bright days for yeast research.

Převorovský M, Rallis C.

Genome Biol. 2011;12(5):305. doi: 10.1186/gb-2011-12-5-305. Epub 2011 May 31.

27.

Cell-autonomous integrin control of Wnt and Notch signalling during somitogenesis.

Rallis C, Pinchin SM, Ish-Horowicz D.

Development. 2010 Nov;137(21):3591-601. doi: 10.1242/dev.050070. Epub 2010 Sep 28.

28.

Integrin-linked kinase is a functional Mn2+-dependent protein kinase that regulates glycogen synthase kinase-3β (GSK-3beta) phosphorylation.

Maydan M, McDonald PC, Sanghera J, Yan J, Rallis C, Pinchin S, Hannigan GE, Foster LJ, Ish-Horowicz D, Walsh MP, Dedhar S.

PLoS One. 2010 Aug 23;5(8):e12356. doi: 10.1371/journal.pone.0012356.

29.

New tricks for an old-favorite model.

Rallis C.

Genome Biol. 2009;10(9):315. doi: 10.1186/gb-2009-10-9-315. Epub 2009 Sep 1.

30.

Elucidating developmental gene networks.

Hanisch A, Vezzaro A, Rallis C.

Genome Biol. 2008;9(6):310. doi: 10.1186/gb-2008-9-6-310. Epub 2008 Jun 2.

31.

Cell signaling and cancer.

Bazigou E, Rallis C.

Genome Biol. 2007;8(7):310. No abstract available.

32.

Chickens get their place in the sun.

Rallis C.

Genome Biol. 2007;8(5):306.

33.

Developmental genomics reaches new heights.

Rallis C.

Genome Biol. 2006;7(10):329. Epub 2006 Oct 31. No abstract available.

34.

Tbx3 can alter limb position along the rostrocaudal axis of the developing embryo.

Rallis C, Del Buono J, Logan MP.

Development. 2005 Apr;132(8):1961-70.

35.

In vivo dose-response of insects to Hz-2V infection.

Burand JP, Rallis CP.

Virol J. 2004 Dec 21;1:15.

36.

Horizontal transmission of Hz-2V by virus infected Helicoverpa zea moths.

Burand JP, Rallis CP, Tan W.

J Invertebr Pathol. 2004 Feb;85(2):128-31.

PMID:
15050843
37.

Tbx5 is required for forelimb bud formation and continued outgrowth.

Rallis C, Bruneau BG, Del Buono J, Seidman CE, Seidman JG, Nissim S, Tabin CJ, Logan MP.

Development. 2003 Jun;130(12):2741-51.

38.

Pathology and ultrastructure of Hz-2V infection in the agonadal female corn earworm, Helicoverpa zea.

Rallis CP, Burand JP.

J Invertebr Pathol. 2002 Sep;81(1):33-44.

PMID:
12417211
39.
40.

Isolation of the avian homologue of the homeobox gene Mox2 and analysis of its expression pattern in developing somites and limbs.

Rallis C, Stamataki D, Pontikakis S, Mankoo BS, Karagogeos D.

Mech Dev. 2001 Jun;104(1-2):121-4.

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