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Items: 1 to 50 of 193

1.

Cyanide produced with ethylene by ACS and its incomplete detoxification by β-CAS in mango inflorescence leads to malformation.

Ansari MW, Kaushik S, Bains G, Tula S, Joshi B, Rani V, Wattal RK, Rakwal R, Shukla A, Pant RC, Tuteja R, Tuteja N.

Sci Rep. 2019 Dec 4;9(1):18361. doi: 10.1038/s41598-019-54787-7.

2.

Proteomics of Rice-Magnaporthe oryzae Interaction: What Have We Learned So Far?

Meng Q, Gupta R, Min CW, Kwon SW, Wang Y, Je BI, Kim YJ, Jeon JS, Agrawal GK, Rakwal R, Kim ST.

Front Plant Sci. 2019 Oct 29;10:1383. doi: 10.3389/fpls.2019.01383. eCollection 2019. Review.

3.

Concepts and strategies of soybean seed proteomics using the shotgun proteomics approach.

Min CW, Gupta R, Agrawal GK, Rakwal R, Kim ST.

Expert Rev Proteomics. 2019 Sep;16(9):795-804. doi: 10.1080/14789450.2019.1654860. Epub 2019 Aug 13.

PMID:
31398080
4.

Towards identification of bioactive compounds in cold vacuum extracted double cherry blossom (Gosen-Sakura) leaves.

Shibato J, Takenoya F, Hirabayashi T, Kimura A, Iwasaki Y, Toyoda Y, Hori M, Tamogami S, Rakwal R, Shioda S.

Plant Signal Behav. 2019;14(10):e1644594. doi: 10.1080/15592324.2019.1644594. Epub 2019 Jul 25.

PMID:
31342859
5.

Leptin in hippocampus mediates benefits of mild exercise by an antioxidant on neurogenesis and memory.

Yook JS, Rakwal R, Shibato J, Takahashi K, Koizumi H, Shima T, Ikemoto MJ, Oharomari LK, McEwen BS, Soya H.

Proc Natl Acad Sci U S A. 2019 May 28;116(22):10988-10993. doi: 10.1073/pnas.1815197116. Epub 2019 May 13.

6.

Phosphoproteome data from abscisic acid and ethylene treated Glycine max leaves.

Gupta R, Min CW, Meng Q, Jun TH, Agrawal GK, Rakwal R, Kim ST.

Data Brief. 2018 Aug 21;20:516-520. doi: 10.1016/j.dib.2018.08.037. eCollection 2018 Oct.

7.

Transcriptomic Analysis of Oryza sativa Leaves Reveals Key Changes in Response to Magnaporthe oryzae MSP1.

Meng Q, Gupta R, Kwon SJ, Wang Y, Agrawal GK, Rakwal R, Park SR, Kim ST.

Plant Pathol J. 2018 Aug;34(4):257-268. doi: 10.5423/PPJ.OA.01.2018.0008. Epub 2018 Aug 1.

8.

Comparative phosphoproteome analysis upon ethylene and abscisic acid treatment in Glycine max leaves.

Gupta R, Min CW, Meng Q, Agrawal GK, Rakwal R, Kim ST.

Plant Physiol Biochem. 2018 Sep;130:173-180. doi: 10.1016/j.plaphy.2018.07.002. Epub 2018 Jul 4.

PMID:
29990770
9.

Proteomic studies on lactic acid bacteria: A review.

Vinusha KS, Deepika K, Johnson TS, Agrawal GK, Rakwal R.

Biochem Biophys Rep. 2018 May 4;14:140-148. doi: 10.1016/j.bbrep.2018.04.009. eCollection 2018 Jul. Review.

10.

CfPDIP1, a novel secreted protein of Colletotrichum falcatum, elicits defense responses in sugarcane and triggers hypersensitive response in tobacco.

Ashwin NMR, Barnabas L, Ramesh Sundar A, Malathi P, Viswanathan R, Masi A, Agrawal GK, Rakwal R.

Appl Microbiol Biotechnol. 2018 Jul;102(14):6001-6021. doi: 10.1007/s00253-018-9009-2. Epub 2018 May 4.

PMID:
29728727
11.

A Multi-Omics Analysis of Glycine max Leaves Reveals Alteration in Flavonoid and Isoflavonoid Metabolism Upon Ethylene and Abscisic Acid Treatment.

Gupta R, Min CW, Kramer K, Agrawal GK, Rakwal R, Park KH, Wang Y, Finkemeier I, Kim ST.

Proteomics. 2018 Apr;18(7):e1700366. doi: 10.1002/pmic.201700366. Epub 2018 Mar 7.

PMID:
29457974
12.

Gel-based and gel-free proteome data associated with controlled deterioration treatment of Glycine max seeds.

Min CW, Lee SH, Cheon YE, Han WY, Ko JM, Kang HW, Kim YC, Agrawal GK, Rakwal R, Gupta R, Kim ST.

Data Brief. 2017 Oct 2;15:449-453. doi: 10.1016/j.dib.2017.09.056. eCollection 2017 Dec.

13.

Progress Toward Rice Seed OMICS in Low-Level Gamma Radiation Environment in Iitate Village, Fukushima.

Rakwal R, Hayashi G, Shibato J, Deepak SA, Gundimeda S, Simha U, Padmanaban A, Gupta R, Han SI, Kim ST, Kubo A, Imanaka T, Fukumoto M, Agrawal GK, Shioda S.

J Hered. 2018 Feb 14;109(2):206-211. doi: 10.1093/jhered/esx071.

PMID:
28992201
14.

Unraveling Key Metabolomic Alterations in Wheat Embryos Derived from Freshly Harvested and Water-Imbibed Seeds of Two Wheat Cultivars with Contrasting Dormancy Status.

Das A, Kim DW, Khadka P, Rakwal R, Rohila JS.

Front Plant Sci. 2017 Jul 12;8:1203. doi: 10.3389/fpls.2017.01203. eCollection 2017.

15.

In-depth proteomic analysis of Glycine max seeds during controlled deterioration treatment reveals a shift in seed metabolism.

Min CW, Lee SH, Cheon YE, Han WY, Ko JM, Kang HW, Kim YC, Agrawal GK, Rakwal R, Gupta R, Kim ST.

J Proteomics. 2017 Oct 3;169:125-135. doi: 10.1016/j.jprot.2017.06.022. Epub 2017 Jun 29.

PMID:
28669816
16.

Comparative secretome analysis of Colletotrichum falcatum identifies a cerato-platanin protein (EPL1) as a potential pathogen-associated molecular pattern (PAMP) inducing systemic resistance in sugarcane.

Ashwin NMR, Barnabas L, Ramesh Sundar A, Malathi P, Viswanathan R, Masi A, Agrawal GK, Rakwal R.

J Proteomics. 2017 Oct 3;169:2-20. doi: 10.1016/j.jprot.2017.05.020. Epub 2017 May 22.

PMID:
28546091
17.

Proteomics survey of Solanaceae family: Current status and challenges ahead.

Ghatak A, Chaturvedi P, Paul P, Agrawal GK, Rakwal R, Kim ST, Weckwerth W, Gupta R.

J Proteomics. 2017 Oct 3;169:41-57. doi: 10.1016/j.jprot.2017.05.016. Epub 2017 May 18. Review.

PMID:
28528990
18.

Aquaporins as potential drought tolerance inducing proteins: Towards instigating stress tolerance.

Zargar SM, Nagar P, Deshmukh R, Nazir M, Wani AA, Masoodi KZ, Agrawal GK, Rakwal R.

J Proteomics. 2017 Oct 3;169:233-238. doi: 10.1016/j.jprot.2017.04.010. Epub 2017 Apr 13. Review.

PMID:
28412527
19.

Common bean proteomics: Present status and future strategies.

Zargar SM, Mahajan R, Nazir M, Nagar P, Kim ST, Rai V, Masi A, Ahmad SM, Shah RA, Ganai NA, Agrawal GK, Rakwal R.

J Proteomics. 2017 Oct 3;169:239-248. doi: 10.1016/j.jprot.2017.03.019. Epub 2017 Mar 25. Review.

PMID:
28347863
20.

Label-free quantitative secretome analysis of Xanthomonas oryzae pv. oryzae highlights the involvement of a novel cysteine protease in its pathogenicity.

Wang Y, Gupta R, Song W, Huh HH, Lee SE, Wu J, Agrawal GK, Rakwal R, Kang KY, Park SR, Kim ST.

J Proteomics. 2017 Oct 3;169:202-214. doi: 10.1016/j.jprot.2017.02.012. Epub 2017 Feb 21.

PMID:
28232208
21.

In vitro secretomic analysis identifies putative pathogenicity-related proteins of Sporisorium scitamineum - The sugarcane smut fungus.

Barnabas L, Ashwin NMR, Kaverinathan K, Trentin AR, Pivato M, Sundar AR, Malathi P, Viswanathan R, Carletti P, Arrigoni G, Masi A, Agrawal GK, Rakwal R.

Fungal Biol. 2017 Mar;121(3):199-211. doi: 10.1016/j.funbio.2016.11.004. Epub 2016 Dec 8.

PMID:
28215348
22.

RNA Interference-Mediated Simultaneous Suppression of Seed Storage Proteins in Rice Grains.

Cho K, Lee HJ, Jo YM, Lim SH, Rakwal R, Lee JY, Kim YM.

Front Plant Sci. 2016 Oct 31;7:1624. eCollection 2016.

23.

Methyl jasmonate elicits the biotransformation of geraniol stored as its glucose conjugate into methyl geranate in Achyranthes bidentata plant.

Tamogami S, Agrawal GK, Rakwal R.

Plant Physiol Biochem. 2016 Dec;109:166-170. doi: 10.1016/j.plaphy.2016.09.012. Epub 2016 Sep 17.

PMID:
27694012
24.

Behavioral and omics analyses study on potential involvement of dipeptide balenine through supplementation in diet of senescence-accelerated mouse prone 8.

Wada N, Yamanaka S, Shibato J, Rakwal R, Hirako S, Iizuka Y, Kim H, Matsumoto A, Kimura A, Takenoya F, Yasunaga G, Shioda S.

Genom Data. 2016 Sep 9;10:38-50. doi: 10.1016/j.gdata.2016.09.004. eCollection 2016 Dec.

25.

Proteome data associated with the leaf senescence in Glycine max.

Gupta R, Lee SJ, Min CW, Kim SW, Park KH, Bae DW, Lee BW, Agrawal GK, Rakwal R, Kim ST.

Data Brief. 2016 Aug 28;9:90-5. doi: 10.1016/j.dib.2016.08.045. eCollection 2016 Dec.

26.

Coupling of gel-based 2-DE and 1-DE shotgun proteomics approaches to dig deep into the leaf senescence proteome of Glycine max.

Gupta R, Lee SJ, Min CW, Kim SW, Park KH, Bae DW, Lee BW, Agrawal GK, Rakwal R, Kim ST.

J Proteomics. 2016 Oct 4;148:65-74. doi: 10.1016/j.jprot.2016.07.025. Epub 2016 Jul 27.

PMID:
27474340
27.

An Integrated Biochemical, Proteomics, and Metabolomics Approach for Supporting Medicinal Value of Panax ginseng Fruits.

Kim SW, Gupta R, Lee SH, Min CW, Agrawal GK, Rakwal R, Kim JB, Jo IH, Park SY, Kim JK, Kim YC, Bang KH, Kim ST.

Front Plant Sci. 2016 Jul 4;7:994. doi: 10.3389/fpls.2016.00994. eCollection 2016.

28.

Unraveling the rat blood genome-wide transcriptome after oral administration of lavender oil by a two-color dye-swap DNA microarray approach.

Hori M, Kubo H, Shibato J, Saito T, Ogawa T, Wakamori M, Masuo Y, Shioda S, Rakwal R.

Genom Data. 2016 May 12;8:139-45. doi: 10.1016/j.gdata.2016.05.005. eCollection 2016 Jun.

29.

Expect the Unexpected Enrichment of "Hidden Proteome" of Seeds and Tubers by Depletion of Storage Proteins.

Gupta R, Min CW, Wang Y, Kim YC, Agrawal GK, Rakwal R, Kim ST.

Front Plant Sci. 2016 Jun 1;7:761. doi: 10.3389/fpls.2016.00761. eCollection 2016.

30.

Retroviral induction of GSK-3β expression blocks the stimulatory action of physical exercise on the maturation of newborn neurons.

Llorens-Martín M, Teixeira CM, Jurado-Arjona J, Rakwal R, Shibato J, Soya H, Ávila J.

Cell Mol Life Sci. 2016 Sep;73(18):3569-82. doi: 10.1007/s00018-016-2181-6. Epub 2016 Mar 24.

PMID:
27010990
31.

DNA microarray-based experimental strategy for trustworthy expression profiling of the hippocampal genes by astaxanthin supplementation in adult mouse.

Yook JS, Shibato J, Rakwal R, Soya H.

Genom Data. 2015 Nov 7;7:32-7. doi: 10.1016/j.gdata.2015.11.001. eCollection 2016 Mar.

32.

Proteomic analysis of a compatible interaction between sugarcane and Sporisorium scitamineum.

Barnabas L, Ashwin NM, Kaverinathan K, Trentin AR, Pivato M, Sundar AR, Malathi P, Viswanathan R, Rosana OB, Neethukrishna K, Carletti P, Arrigoni G, Masi A, Agrawal GK, Rakwal R.

Proteomics. 2016 Apr;16(7):1111-22. doi: 10.1002/pmic.201500245.

PMID:
26857420
33.

Astaxanthin supplementation enhances adult hippocampal neurogenesis and spatial memory in mice.

Yook JS, Okamoto M, Rakwal R, Shibato J, Lee MC, Matsui T, Chang H, Cho JY, Soya H.

Mol Nutr Food Res. 2016 Mar;60(3):589-99. doi: 10.1002/mnfr.201500634. Epub 2016 Jan 7.

PMID:
26643409
34.

DNA microarray unravels rapid changes in transcriptome of MK-801 treated rat brain.

Kobayashi Y, Kulikova SP, Shibato J, Rakwal R, Satoh H, Pinault D, Masuo Y.

World J Biol Chem. 2015 Nov 26;6(4):389-408. doi: 10.4331/wjbc.v6.i4.389.

35.

Two-color Dye-swap DNA Microarray approach toward confident gene expression profiling in PMCAO mouse model for ischemia-related and PACAP38-influenced genes.

Hori M, Shibato J, Nakamachi T, Rakwal R, Ogawa T, Shioda S, Numazawa S.

Genom Data. 2015 Jan 22;3:148-54. doi: 10.1016/j.gdata.2015.01.007. eCollection 2015 Mar.

36.

Proteomic analyses of the interaction between the plant-growth promoting rhizobacterium Paenibacillus polymyxa E681 and Arabidopsis thaliana.

Kwon YS, Lee DY, Rakwal R, Baek SB, Lee JH, Kwak YS, Seo JS, Chung WS, Bae DW, Kim SG.

Proteomics. 2016 Jan;16(1):122-35. doi: 10.1002/pmic.201500196.

PMID:
26460066
37.

2D-DIGE-based proteome expression changes in leaves of rice seedlings exposed to low-level gamma radiation at Iitate village, Fukushima.

Hayashi G, Moro CF, Rohila JS, Shibato J, Kubo A, Imanaka T, Kimura S, Ozawa S, Fukutani S, Endo S, Ichikawa K, Agrawal GK, Shioda S, Hori M, Fukumoto M, Rakwal R.

Plant Signal Behav. 2015;10(12):e1103406. doi: 10.1080/15592324.2015.1103406.

38.

Quantitative proteomics reveals role of sugar in decreasing photosynthetic activity due to Fe deficiency.

Zargar SM, Agrawal GK, Rakwal R, Fukao Y.

Front Plant Sci. 2015 Aug 3;6:592. doi: 10.3389/fpls.2015.00592. eCollection 2015. No abstract available.

39.

Immature Seed Endosperm and Embryo Proteomics of the Lotus (Nelumbo Nucifera Gaertn.) by One-Dimensional Gel-Based Tandem Mass Spectrometry and a Comparison with the Mature Endosperm Proteome.

Moro CF, Fukao Y, Shibato J, Rakwal R, Agrawal GK, Shioda S, Kouzuma Y, Yonekura M.

Proteomes. 2015 Aug 14;3(3):184-235. doi: 10.3390/proteomes3030184.

40.

Comparative Biochemical and Proteomic Analyses of Soybean Seed Cultivars Differing in Protein and Oil Content.

Min CW, Gupta R, Kim SW, Lee SE, Kim YC, Bae DW, Han WY, Lee BW, Ko JM, Agrawal GK, Rakwal R, Kim ST.

J Agric Food Chem. 2015 Aug 19;63(32):7134-42. doi: 10.1021/acs.jafc.5b03196. Epub 2015 Aug 11.

PMID:
26237057
41.

Correction: Long-Term Mild, rather than Intense, Exercise Enhances Adult Hippocampal Neurogenesis and Greatly Changes the Transcriptomic Profile of the Hippocampus.

Inoue K, Okamoto M, Shibato J, Lee MC, Matsui T, Rakwal R, Soya H.

PLoS One. 2015 Jul 13;10(7):e0133089. doi: 10.1371/journal.pone.0133089. eCollection 2015.

42.

Unraveling the Rat Intestine, Spleen and Liver Genome-Wide Transcriptome after the Oral Administration of Lavender Oil by a Two-Color Dye-Swap DNA Microarray Approach.

Kubo H, Shibato J, Saito T, Ogawa T, Rakwal R, Shioda S.

PLoS One. 2015 Jul 10;10(7):e0129951. doi: 10.1371/journal.pone.0129951. eCollection 2015.

43.

Understanding the plant-pathogen interactions in the context of proteomics-generated apoplastic proteins inventory.

Gupta R, Lee SE, Agrawal GK, Rakwal R, Park S, Wang Y, Kim ST.

Front Plant Sci. 2015 Jun 2;6:352. doi: 10.3389/fpls.2015.00352. eCollection 2015. Review.

44.

Long-Term Mild, rather than Intense, Exercise Enhances Adult Hippocampal Neurogenesis and Greatly Changes the Transcriptomic Profile of the Hippocampus.

Inoue K, Okamoto M, Shibato J, Lee MC, Matsui T, Rakwal R, Soya H.

PLoS One. 2015 Jun 10;10(6):e0128720. doi: 10.1371/journal.pone.0128720. eCollection 2015. Erratum in: PLoS One. 2015;10(7):e0133089.

45.

Gamma-glutamyl cycle in plants: a bridge connecting the environment to the plant cell?

Masi A, Trentin AR, Agrawal GK, Rakwal R.

Front Plant Sci. 2015 Apr 16;6:252. doi: 10.3389/fpls.2015.00252. eCollection 2015. No abstract available.

46.

Proteomic analysis of lipid body from the alkenone-producing marine haptophyte alga Tisochrysis lutea.

Shi Q, Araie H, Bakku RK, Fukao Y, Rakwal R, Suzuki I, Shiraiwa Y.

Proteomics. 2015 Dec;15(23-24):4145-58. doi: 10.1002/pmic.201500010. Epub 2015 Jul 2.

47.

Calcium modulates membrane association, positional specificity, and product distribution in dual positional specific maize lipoxygenase-1.

Cho K, Han J, Rakwal R, Han O.

Bioorg Chem. 2015 Jun;60:13-8. doi: 10.1016/j.bioorg.2015.04.001. Epub 2015 Apr 9.

PMID:
25899679
48.

Towards a common bean proteome atlas: looking at the current state of research and the need for a comprehensive proteome.

Zargar SM, Nazir M, Rai V, Hajduch M, Agrawal GK, Rakwal R.

Front Plant Sci. 2015 Mar 27;6:201. doi: 10.3389/fpls.2015.00201. eCollection 2015. No abstract available.

49.

INPPO2014, First INPPO World Congress on "Plant Proteomics: Methodology to Biology"-A global platform for involving, gathering and disseminating knowledge.

Lüthje S, Renaut J, Job D, Hajduch M, Carpentier S, Sarkar A, Agrawal R, Dunn MJ, Rakwal R, Agrawal GK.

Proteomics. 2015 May;15(10):1631-7. doi: 10.1002/pmic.201570084. Epub 2015 Apr 11.

PMID:
25865070
50.

Moving forward in plant food safety and security through NanoBioSensors: Adopt or adapt biomedical technologies?

Sharma TK, Ramanathan R, Rakwal R, Agrawal GK, Bansal V.

Proteomics. 2015 May;15(10):1680-92. doi: 10.1002/pmic.201400503. Epub 2015 Apr 17. Review.

PMID:
25727733

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