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Overexpression of hsa-miR-186 induces chromosomal instability in arsenic-exposed human keratinocytes.

Wu J, Ferragut Cardoso AP, States VAR, Al-Eryani L, Doll M, Wise SS, Rai SN, States JC.

Toxicol Appl Pharmacol. 2019 Jun 6:114614. doi: 10.1016/j.taap.2019.114614. [Epub ahead of print]


Adherence to anti-estrogen therapy in women with hormone receptor-positive breast cancer utilizing bubble packaging: a pilot study.

Bhandari S, Ngo P, Kute B, Mandadi M, Pitman WA, Wu X, Lloyd S, Brown MC, Rai SN, Jain D, Riley EC.

Breast Cancer Res Treat. 2019 Jun 6. doi: 10.1007/s10549-019-05308-7. [Epub ahead of print]


Neuroprotective effects of Withania somnifera in BPA induced-cognitive dysfunction and oxidative stress in mice.

Birla H, Keswani C, Rai SN, Singh SS, Zahra W, Dilnashin H, Rathore AS, Singh SP.

Behav Brain Funct. 2019 May 7;15(1):9. doi: 10.1186/s12993-019-0160-4.


Liquid biopsy using the nanotube-CTC-chip: capture of invasive CTCs with high purity using preferential adherence in breast cancer patients.

Loeian MS, Mehdi Aghaei S, Farhadi F, Rai V, Yang HW, Johnson MD, Aqil F, Mandadi M, Rai SN, Panchapakesan B.

Lab Chip. 2019 Jun 7;19(11):1899-1915. doi: 10.1039/c9lc00274j. Epub 2019 May 3.


Anti-inflammatory Activity of Ursolic Acid in MPTP-Induced Parkinsonian Mouse Model.

Rai SN, Zahra W, Singh SS, Birla H, Keswani C, Dilnashin H, Rathore AS, Singh R, Singh RK, Singh SP.

Neurotox Res. 2019 Apr 23. doi: 10.1007/s12640-019-00038-6. [Epub ahead of print]


The Role of PI3K/Akt and ERK in Neurodegenerative Disorders.

Rai SN, Dilnashin H, Birla H, Singh SS, Zahra W, Rathore AS, Singh BK, Singh SP.

Neurotox Res. 2019 Apr;35(3):775-795. doi: 10.1007/s12640-019-0003-y. Epub 2019 Feb 1. Review.


Sample size calculations for the differential expression analysis of RNA-seq data using a negative binomial regression model.

Li X, Wu D, Cooper NGF, Rai SN.

Stat Appl Genet Mol Biol. 2019 Jan 22;18(1). pii: /j/sagmb.2019.18.issue-1/sagmb-2018-0021/sagmb-2018-0021.xml. doi: 10.1515/sagmb-2018-0021.


Tinospora cordifolia Suppresses Neuroinflammation in Parkinsonian Mouse Model.

Birla H, Rai SN, Singh SS, Zahra W, Rawat A, Tiwari N, Singh RK, Pathak A, Singh SP.

Neuromolecular Med. 2019 Mar;21(1):42-53. doi: 10.1007/s12017-018-08521-7. Epub 2019 Jan 14.


5-(3,3-Dimethyle-1-Triazeno) Imidazole-4-Carboxamide and Interleukin-2 Adjuvant Therapy in Resected High-Risk Primary and Regionally Metastatic Melanoma.

Gill A, Gosain R, Gragg H, Bycroft R, Rai SN, Pan J, Chesney JA, Miller DM.

Am J Med Sci. 2019 Jan;357(1):43-48. doi: 10.1016/j.amjms.2018.10.009. Epub 2018 Oct 25.


Biphenyl-3-oxo-1,2,4-triazine linked piperazine derivatives as potential cholinesterase inhibitors with anti-oxidant property to improve the learning and memory.

Tripathi PN, Srivastava P, Sharma P, Tripathi MK, Seth A, Tripathi A, Rai SN, Singh SP, Shrivastava SK.

Bioorg Chem. 2019 Apr;85:82-96. doi: 10.1016/j.bioorg.2018.12.017. Epub 2018 Dec 15.


Association Between Residential Greenness and Cardiovascular Disease Risk.

Yeager R, Riggs DW, DeJarnett N, Tollerud DJ, Wilson J, Conklin DJ, O'Toole TE, McCracken J, Lorkiewicz P, Xie Z, Zafar N, Krishnasamy SS, Srivastava S, Finch J, Keith RJ, DeFilippis A, Rai SN, Liu G, Bhatnagar A.

J Am Heart Assoc. 2018 Dec 18;7(24):e009117. doi: 10.1161/JAHA.118.009117.


Impact of 21-Gene Expression Assay on Staging Estrogen Receptor-Positive HER2-Negative Breast Cancer.

Breaux A, Turner B, Wu X, Rai SN, Riley EC, Mandadi M, Sanders MA.

Clin Breast Cancer. 2019 Feb;19(1):e261-e269. doi: 10.1016/j.clbc.2018.10.005. Epub 2018 Oct 29.


Design and development of some phenyl benzoxazole derivatives as a potent acetylcholinesterase inhibitor with antioxidant property to enhance learning and memory.

Srivastava P, Tripathi PN, Sharma P, Rai SN, Singh SP, Srivastava RK, Shankar S, Shrivastava SK.

Eur J Med Chem. 2019 Feb 1;163:116-135. doi: 10.1016/j.ejmech.2018.11.049. Epub 2018 Nov 22.


Prevalence, patterns, and predictors of diarrhea: a spatial-temporal comprehensive evaluation in India.

Nilima, Kamath A, Shetty K, Unnikrishnan B, Kaushik S, Rai SN.

BMC Public Health. 2018 Nov 23;18(1):1288. doi: 10.1186/s12889-018-6213-z.


Circulating angiogenic stem cells in type 2 diabetes are associated with glycemic control and endothelial dysfunction.

Zafar N, Krishnasamy SS, Shah J, Rai SN, Riggs DW, Bhatnagar A, O'Toole TE.

PLoS One. 2018 Oct 15;13(10):e0205851. doi: 10.1371/journal.pone.0205851. eCollection 2018.


Effect of Chlorogenic Acid Supplementation in MPTP-Intoxicated Mouse.

Singh SS, Rai SN, Birla H, Zahra W, Kumar G, Gedda MR, Tiwari N, Patnaik R, Singh RK, Singh SP.

Front Pharmacol. 2018 Aug 6;9:757. doi: 10.3389/fphar.2018.00757. eCollection 2018.


miRNA expression profiles of premalignant and malignant arsenic-induced skin lesions.

Al-Eryani L, Jenkins SF, States VA, Pan J, Malone JC, Rai SN, Galandiuk S, Giri AK, States JC.

PLoS One. 2018 Aug 16;13(8):e0202579. doi: 10.1371/journal.pone.0202579. eCollection 2018.


Commentary: Metformin reverses TRAP1 mutation-associated alterations in mitochondrial function in Parkinson's disease.

Rai SN, Singh SS, Birla H, Zahra W, Rathore AS, Singh P, Singh SP.

Front Aging Neurosci. 2018 Jul 31;10:221. doi: 10.3389/fnagi.2018.00221. eCollection 2018. No abstract available.


Viral DNA integration and methylation of human papillomavirus type 16 in high-grade oral epithelial dysplasia and head and neck squamous cell carcinoma.

Khanal S, Shumway BS, Zahin M, Redman RA, Strickley JD, Trainor PJ, Rai SN, Ghim SJ, Jenson AB, Joh J.

Oncotarget. 2018 Jul 13;9(54):30419-30433. doi: 10.18632/oncotarget.25754. eCollection 2018 Jul 13.


Systemic Toxicity of Smokeless Tobacco Products in Mice.

Malovichko MV, Zeller I, Krivokhizhina TV, Xie Z, Lorkiewicz P, Agarwal A, Wickramasinghe N, Sithu SD, Shah J, O'Toole T, Rai SN, Bhatnagar A, Conklin DJ, Srivastava S.

Nicotine Tob Res. 2019 Jan 1;21(1):101-110. doi: 10.1093/ntr/ntx230.


Commentary: Mild endoplasmic reticulum stress ameliorates lpopolysaccharide-induced neuroinflammation and cognitive impairment via regulation of microglial polarization.

Rai SN, Zahra W, Birla H, Singh SS, Singh SP.

Front Aging Neurosci. 2018 Jun 25;10:192. doi: 10.3389/fnagi.2018.00192. eCollection 2018. No abstract available.


Continuous infusion of low-dose unfractionated heparin after aneurysmal subarachnoid hemorrhage: a preliminary study of cognitive outcomes.

James RF, Khattar NK, Aljuboori ZS, Page PS, Shao EY, Carter LM, Meyer KS, Daniels MW, Craycroft J, Gaughen JR, Chaudry MI, Rai SN, Everhart DE, Simard JM.

J Neurosurg. 2018 May 11:1-8. doi: 10.3171/2017.11.JNS17894. [Epub ahead of print]


Liver Disease in a Residential Cohort With Elevated Polychlorinated Biphenyl Exposures.

Clair HB, Pinkston CM, Rai SN, Pavuk M, Dutton ND, Brock GN, Prough RA, Falkner KC, McClain CJ, Cave MC.

Toxicol Sci. 2018 Jul 1;164(1):39-49. doi: 10.1093/toxsci/kfy076.


Micro-RNA-186-5p inhibition attenuates proliferation, anchorage independent growth and invasion in metastatic prostate cancer cells.

Jones DZ, Schmidt ML, Suman S, Hobbing KR, Barve SS, Gobejishvili L, Brock G, Klinge CM, Rai SN, Park J, Clark GJ, Agarwal R, Kidd LR.

BMC Cancer. 2018 Apr 13;18(1):421. doi: 10.1186/s12885-018-4258-0.


Intra-Arterial Thrombolysis for Acute Central Retinal Artery Occlusion: A Systematic Review and Meta-Analysis.

Page PS, Khattar NK, White AC, Cambon AC, Brock GN, Rai SN, James RF.

Front Neurol. 2018 Feb 21;9:76. doi: 10.3389/fneur.2018.00076. eCollection 2018.


Unique Genes in Tumor-Positive Sentinel Lymph Nodes Associated with Nonsentinel Lymph Node Metastases in Melanoma.

Egger ME, Xiao D, Hao H, Kimbrough CW, Pan J, Rai SN, Cambon AC, Waigel SJ, Zacharias W, McMasters KM.

Ann Surg Oncol. 2018 May;25(5):1296-1303. doi: 10.1245/s10434-018-6377-x. Epub 2018 Mar 1.


Effect of Lecture Attendance and Prerequisite Academic Outcomes on Dental Students' Oral Pathology Performance.

Shumway BS, Bernstein ML, Qian C, Kulkarni MY, Rai SN.

J Dent Educ. 2018 Mar;82(3):306-312. doi: 10.21815/JDE.018.031.


Statistical approach for selection of biologically informative genes.

Das S, Rai A, Mishra DC, Rai SN.

Gene. 2018 May 20;655:71-83. doi: 10.1016/j.gene.2018.02.044. Epub 2018 Feb 16.


Statistical Approach for Gene Set Analysis with Trait Specific Quantitative Trait Loci.

Das S, Rai A, Mishra DC, Rai SN.

Sci Rep. 2018 Feb 5;8(1):2391. doi: 10.1038/s41598-018-19736-w.


Commentary: Synaptic vesicle glycoprotein 2C (SV2C) modulates dopamine release and is disrupted in Parkinson disease.

Rai SN, Birla H, Zahra W, Sen Singh S, Singh SP.

Front Synaptic Neurosci. 2018 Jan 4;9:18. doi: 10.3389/fnsyn.2017.00018. eCollection 2017. No abstract available.


Mucuna pruriens Protects against MPTP Intoxicated Neuroinflammation in Parkinson's Disease through NF-κB/pAKT Signaling Pathways.

Rai SN, Birla H, Singh SS, Zahra W, Patil RR, Jadhav JP, Gedda MR, Singh SP.

Front Aging Neurosci. 2017 Dec 19;9:421. doi: 10.3389/fnagi.2017.00421. eCollection 2017.


Plasma microRNA Profile Differentiates Crohn's Colitis From Ulcerative Colitis.

Netz U, Carter J, Eichenberger MR, Feagins K, Galbraith NJ, Dryden GW, Pan J, Rai SN, Galandiuk S.

Inflamm Bowel Dis. 2017 Dec 19;24(1):159-165. doi: 10.1093/ibd/izx009.


Genetic polymorphisms predict response to anti-tumor necrosis factor treatment in Crohn's disease.

Netz U, Carter JV, Eichenberger MR, Dryden GW, Pan J, Rai SN, Galandiuk S.

World J Gastroenterol. 2017 Jul 21;23(27):4958-4967. doi: 10.3748/wjg.v23.i27.4958.


Immunomodulation of Parkinson's disease using Mucuna pruriens (Mp).

Rai SN, Birla H, Zahra W, Singh SS, Singh SP.

J Chem Neuroanat. 2017 Nov;85:27-35. doi: 10.1016/j.jchemneu.2017.06.005. Epub 2017 Jun 19. Review.


Evaluation of Classifier Performance for Multiclass Phenotype Discrimination in Untargeted Metabolomics.

Trainor PJ, DeFilippis AP, Rai SN.

Metabolites. 2017 Jun 21;7(2). pii: E30. doi: 10.3390/metabo7020030.


First Results of a Phase 2 Trial of Once-Weekly Hypofractionated Breast Irradiation (WHBI) for Early-Stage Breast Cancer.

Dragun AE, Ajkay NJ, Riley EC, Roberts TL, Pan J, Rai SN, Jain D, Quillo AR, Scoggins CR, McMasters KM, Woo SY.

Int J Radiat Oncol Biol Phys. 2017 Jul 1;98(3):595-602. doi: 10.1016/j.ijrobp.2017.01.212.


Biomarkers of Chronic Acrolein Inhalation Exposure in Mice: Implications for Tobacco Product-Induced Toxicity.

Conklin DJ, Malovichko MV, Zeller I, Das TP, Krivokhizhina TV, Lynch BH, Lorkiewicz P, Agarwal A, Wickramasinghe N, Haberzettl P, Sithu SD, Shah J, O'Toole TE, Rai SN, Bhatnagar A, Srivastava S.

Toxicol Sci. 2017 Aug 1;158(2):263-274. doi: 10.1093/toxsci/kfx095.


A comparison of per sample global scaling and per gene normalization methods for differential expression analysis of RNA-seq data.

Li X, Brock GN, Rouchka EC, Cooper NGF, Wu D, O'Toole TE, Gill RS, Eteleeb AM, O'Brien L, Rai SN.

PLoS One. 2017 May 1;12(5):e0176185. doi: 10.1371/journal.pone.0176185. eCollection 2017.


Identification of a plasma metabolomic signature of thrombotic myocardial infarction that is distinct from non-thrombotic myocardial infarction and stable coronary artery disease.

DeFilippis AP, Trainor PJ, Hill BG, Amraotkar AR, Rai SN, Hirsch GA, Rouchka EC, Bhatnagar A.

PLoS One. 2017 Apr 17;12(4):e0175591. doi: 10.1371/journal.pone.0175591. eCollection 2017.


Histologic variation in high grade oral epithelial dysplasia when associated with high-risk human papillomavirus.

Khanal S, Trainor PJ, Zahin M, Ghim SJ, Joh J, Rai SN, Jenson AB, Shumway BS.

Oral Surg Oral Med Oral Pathol Oral Radiol. 2017 May;123(5):566-585. doi: 10.1016/j.oooo.2017.01.008. Epub 2017 Jan 24.


High-dose versus weekly cisplatin definitive chemoradiotherapy for HPV-related oropharyngeal squamous cell carcinoma of the head and neck.

Perez CA, Wu X, Amsbaugh MJ, Gosain R, Claudino WM, Yusuf M, Roberts T, Jain D, Jenson A, Khanal S, Silverman CI, Tennant P, Bumpous JM, Dunlap NE, Rai SN, Redman RA.

Oral Oncol. 2017 Apr;67:24-28. doi: 10.1016/j.oraloncology.2017.01.010. Epub 2017 Feb 3.


Systems characterization of differential plasma metabolome perturbations following thrombotic and non-thrombotic myocardial infarction.

Trainor PJ, Hill BG, Carlisle SM, Rouchka EC, Rai SN, Bhatnagar A, DeFilippis AP.

J Proteomics. 2017 May 8;160:38-46. doi: 10.1016/j.jprot.2017.03.014. Epub 2017 Mar 22.


Distribution based nearest neighbor imputation for truncated high dimensional data with applications to pre-clinical and clinical metabolomics studies.

Shah JS, Rai SN, DeFilippis AP, Hill BG, Bhatnagar A, Brock GN.

BMC Bioinformatics. 2017 Feb 20;18(1):114. doi: 10.1186/s12859-017-1547-6.


Presence of multiple coronary angiographic characteristics for the diagnosis of acute coronary thrombus.

Amraotkar AR, Ghafghazi S, Trainor PJ, Hargis CW, Irfan AB, Rai SN, Bhatnagar A, DeFilippis AP.

Cardiol J. 2017;24(1):25-34. doi: 10.5603/CJ.a2017.0004. Epub 2017 Feb 2.


Phase II Trial on Extending the Maintenance Flushing Interval of Implanted Ports.

Diaz JA, Rai SN, Wu X, Chao JH, Dias AL, Kloecker GH.

J Oncol Pract. 2017 Jan;13(1):e22-e28. doi: 10.1200/JOP.2016.010843. Epub 2016 Oct 23.


Classification of biosensor time series using dynamic time warping: applications in screening cancer cells with characteristic biomarkers.

Rai SN, Trainor PJ, Khosravi F, Kloecker G, Panchapakesan B.

Open Access Med Stat. 2016;2016(6):21-29. Epub 2016 Jun 18.


Mucuna pruriens reduces inducible nitric oxide synthase expression in Parkinsonian mice model.

Yadav SK, Rai SN, Singh SP.

J Chem Neuroanat. 2017 Mar;80:1-10. doi: 10.1016/j.jchemneu.2016.11.009. Epub 2016 Dec 2.


An efficient algorithm for protein structure comparison using elastic shape analysis.

Srivastava S, Lal SB, Mishra DC, Angadi UB, Chaturvedi KK, Rai SN, Rai A.

Algorithms Mol Biol. 2016 Sep 29;11:27. eCollection 2016.


Static micro-array isolation, dynamic time series classification, capture and enumeration of spiked breast cancer cells in blood: the nanotube-CTC chip.

Khosravi F, Trainor PJ, Lambert C, Kloecker G, Wickstrom E, Rai SN, Panchapakesan B.

Nanotechnology. 2016 Nov 4;27(44):44LT03. Epub 2016 Sep 29.


Sentinel Lymph Node Genes to Predict Prognosis in Node-Positive Melanoma Patients.

Hao H, Xiao D, Pan J, Qu J, Egger M, Waigel S, Sanders MA, Zacharias W, Rai SN, McMasters KM.

Ann Surg Oncol. 2017 Jan;24(1):108-116. doi: 10.1245/s10434-016-5575-7. Epub 2016 Sep 23.


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