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Items: 48

1.

Expression polymorphism at the ARPC4 locus links the actin cytoskeleton with quantitative disease resistance to Sclerotinia sclerotiorum in Arabidopsis thaliana.

Badet T, Léger O, Barascud M, Voisin D, Sadon P, Vincent R, Ru AL, Balagué C, Roby D, Raffaele S.

New Phytol. 2018 Nov 4. doi: 10.1111/nph.15580. [Epub ahead of print]

PMID:
30393937
2.

Shifts in diversification rates and host jump frequencies shaped the diversity of host range among Sclerotiniaceae fungal plant pathogens.

Navaud O, Barbacci A, Taylor A, Clarkson JP, Raffaele S.

Mol Ecol. 2018 Mar;27(5):1309-1323. doi: 10.1111/mec.14523. Epub 2018 Mar 23.

3.

Parallel evolution of the POQR prolyl oligo peptidase gene conferring plant quantitative disease resistance.

Badet T, Voisin D, Mbengue M, Barascud M, Sucher J, Sadon P, Balagué C, Roby D, Raffaele S.

PLoS Genet. 2017 Dec 22;13(12):e1007143. doi: 10.1371/journal.pgen.1007143. eCollection 2017 Dec.

4.

The genetics underlying natural variation of plant-plant interactions, a beloved but forgotten member of the family of biotic interactions.

Subrahmaniam HJ, Libourel C, Journet EP, Morel JB, Muños S, Niebel A, Raffaele S, Roux F.

Plant J. 2018 Feb;93(4):747-770. doi: 10.1111/tpj.13799. Epub 2018 Jan 22.

PMID:
29232012
5.

Structural basis for plant plasma membrane protein dynamics and organization into functional nanodomains.

Gronnier J, Crowet JM, Habenstein B, Nasir MN, Bayle V, Hosy E, Platre MP, Gouguet P, Raffaele S, Martinez D, Grelard A, Loquet A, Simon-Plas F, Gerbeau-Pissot P, Der C, Bayer EM, Jaillais Y, Deleu M, Germain V, Lins L, Mongrand S.

Elife. 2017 Jul 31;6. pii: e26404. doi: 10.7554/eLife.26404.

6.

The complete genome sequence of the phytopathogenic fungus Sclerotinia sclerotiorum reveals insights into the genome architecture of broad host range pathogens.

Derbyshire M, Denton-Giles M, Hegedus D, Seifbarghy S, Rollins J, van Kan J, Seidl MF, Faino L, Mbengue M, Navaud O, Raffaele S, Hammond-Kosack K, Heard S, Oliver R.

Genome Biol Evol. 2017 Feb 15. doi: 10.1093/gbe/evx030. [Epub ahead of print] No abstract available.

7.

Codon optimization underpins generalist parasitism in fungi.

Badet T, Peyraud R, Mbengue M, Navaud O, Derbyshire M, Oliver RP, Barbacci A, Raffaele S.

Elife. 2017 Feb 3;6. pii: e22472. doi: 10.7554/eLife.22472.

8.

Advances on plant-pathogen interactions from molecular toward systems biology perspectives.

Peyraud R, Dubiella U, Barbacci A, Genin S, Raffaele S, Roby D.

Plant J. 2017 May;90(4):720-737. doi: 10.1111/tpj.13429. Epub 2017 Feb 10. Review.

9.

Comparative Genomic Analysis of Drechmeria coniospora Reveals Core and Specific Genetic Requirements for Fungal Endoparasitism of Nematodes.

Lebrigand K, He LD, Thakur N, Arguel MJ, Polanowska J, Henrissat B, Record E, Magdelenat G, Barbe V, Raffaele S, Barbry P, Ewbank JJ.

PLoS Genet. 2016 May 6;12(5):e1006017. doi: 10.1371/journal.pgen.1006017. eCollection 2016 May.

10.

Emerging Trends in Molecular Interactions between Plants and the Broad Host Range Fungal Pathogens Botrytis cinerea and Sclerotinia sclerotiorum.

Mbengue M, Navaud O, Peyraud R, Barascud M, Badet T, Vincent R, Barbacci A, Raffaele S.

Front Plant Sci. 2016 Mar 31;7:422. doi: 10.3389/fpls.2016.00422. eCollection 2016. Review.

11.

The two-speed genomes of filamentous pathogens: waltz with plants.

Dong S, Raffaele S, Kamoun S.

Curr Opin Genet Dev. 2015 Dec;35:57-65. doi: 10.1016/j.gde.2015.09.001. Epub 2015 Nov 3. Review.

PMID:
26451981
12.

Common protein sequence signatures associate with Sclerotinia borealis lifestyle and secretion in fungal pathogens of the Sclerotiniaceae.

Badet T, Peyraud R, Raffaele S.

Front Plant Sci. 2015 Sep 24;6:776. doi: 10.3389/fpls.2015.00776. eCollection 2015.

13.

A receptor pair with an integrated decoy converts pathogen disabling of transcription factors to immunity.

Le Roux C, Huet G, Jauneau A, Camborde L, Trémousaygue D, Kraut A, Zhou B, Levaillant M, Adachi H, Yoshioka H, Raffaele S, Berthomé R, Couté Y, Parker JE, Deslandes L.

Cell. 2015 May 21;161(5):1074-1088. doi: 10.1016/j.cell.2015.04.025.

14.

A Recent Expansion of the RXLR Effector Gene Avrblb2 Is Maintained in Global Populations of Phytophthora infestans Indicating Different Contributions to Virulence.

Oliva RF, Cano LM, Raffaele S, Win J, Bozkurt TO, Belhaj K, Oh SK, Thines M, Kamoun S.

Mol Plant Microbe Interact. 2015 Aug;28(8):901-12. doi: 10.1094/MPMI-12-14-0393-R. Epub 2015 Jul 17.

15.

Identification and phylogenetic analyses of VASt, an uncharacterized protein domain associated with lipid-binding domains in Eukaryotes.

Khafif M, Cottret L, Balagué C, Raffaele S.

BMC Bioinformatics. 2014 Jun 26;15:222. doi: 10.1186/1471-2105-15-222.

16.

Secretome analysis reveals effector candidates associated with broad host range necrotrophy in the fungal plant pathogen Sclerotinia sclerotiorum.

Guyon K, Balagué C, Roby D, Raffaele S.

BMC Genomics. 2014 May 4;15:336. doi: 10.1186/1471-2164-15-336.

17.

The Plant Membrane-Associated REMORIN1.3 Accumulates in Discrete Perihaustorial Domains and Enhances Susceptibility to Phytophthora infestans.

Bozkurt TO, Richardson A, Dagdas YF, Mongrand S, Kamoun S, Raffaele S.

Plant Physiol. 2014 Jul;165(3):1005-1018. Epub 2014 May 7.

18.

Resistance to phytopathogens e tutti quanti: placing plant quantitative disease resistance on the map.

Roux F, Voisin D, Badet T, Balagué C, Barlet X, Huard-Chauveau C, Roby D, Raffaele S.

Mol Plant Pathol. 2014 Jun;15(5):427-32. doi: 10.1111/mpp.12138. No abstract available.

PMID:
24796392
19.

Two-dimensional data binning for the analysis of genome architecture in filamentous plant pathogens and other eukaryotes.

Saunders DG, Win J, Kamoun S, Raffaele S.

Methods Mol Biol. 2014;1127:29-51. doi: 10.1007/978-1-62703-986-4_3.

PMID:
24643550
20.

Major transcriptome reprogramming underlies floral mimicry induced by the rust fungus Puccinia monoica in Boechera stricta.

Cano LM, Raffaele S, Haugen RH, Saunders DG, Leonelli L, MacLean D, Hogenhout SA, Kamoun S.

PLoS One. 2013 Sep 17;8(9):e75293. doi: 10.1371/journal.pone.0075293. eCollection 2013.

21.

Searching algorithm for type IV secretion system effectors 1.0: a tool for predicting type IV effectors and exploring their genomic context.

Meyer DF, Noroy C, Moumène A, Raffaele S, Albina E, Vachiéry N.

Nucleic Acids Res. 2013 Nov;41(20):9218-29. doi: 10.1093/nar/gkt718. Epub 2013 Aug 13.

22.

From pathogen genomes to host plant processes: the power of plant parasitic oomycetes.

Pais M, Win J, Yoshida K, Etherington GJ, Cano LM, Raffaele S, Banfield MJ, Jones A, Kamoun S, Saunders DG.

Genome Biol. 2013 Jun 28;14(6):211. doi: 10.1186/gb-2013-14-6-211. Review.

23.

Regulate and be regulated: integration of defense and other signals by the AtMYB30 transcription factor.

Raffaele S, Rivas S.

Front Plant Sci. 2013 Apr 11;4:98. doi: 10.3389/fpls.2013.00098. eCollection 2013.

24.

The Remorin C-terminal Anchor was shaped by convergent evolution among membrane binding domains.

Raffaele S, Perraki A, Mongrand S.

Plant Signal Behav. 2013 Mar;8(3):e23207. doi: 10.4161/psb.23207. Epub 2013 Jan 8.

25.

Natural variation in seed very long chain fatty acid content is controlled by a new isoform of KCS18 in Arabidopsis thaliana.

Jasinski S, Lécureuil A, Miquel M, Loudet O, Raffaele S, Froissard M, Guerche P.

PLoS One. 2012;7(11):e49261. doi: 10.1371/journal.pone.0049261. Epub 2012 Nov 8.

26.

Genome analyses of an aggressive and invasive lineage of the Irish potato famine pathogen.

Cooke DE, Cano LM, Raffaele S, Bain RA, Cooke LR, Etherington GJ, Deahl KL, Farrer RA, Gilroy EM, Goss EM, Grünwald NJ, Hein I, MacLean D, McNicol JW, Randall E, Oliva RF, Pel MA, Shaw DS, Squires JN, Taylor MC, Vleeshouwers VG, Birch PR, Lees AK, Kamoun S.

PLoS Pathog. 2012;8(10):e1002940. doi: 10.1371/journal.ppat.1002940. Epub 2012 Oct 4.

27.

Plasma membrane localization of Solanum tuberosum remorin from group 1, homolog 3 is mediated by conformational changes in a novel C-terminal anchor and required for the restriction of potato virus X movement].

Perraki A, Cacas JL, Crowet JM, Lins L, Castroviejo M, German-Retana S, Mongrand S, Raffaele S.

Plant Physiol. 2012 Oct;160(2):624-37. doi: 10.1104/pp.112.200519. Epub 2012 Aug 1.

28.

Genome sequencing and mapping reveal loss of heterozygosity as a mechanism for rapid adaptation in the vegetable pathogen Phytophthora capsici.

Lamour KH, Mudge J, Gobena D, Hurtado-Gonzales OP, Schmutz J, Kuo A, Miller NA, Rice BJ, Raffaele S, Cano LM, Bharti AK, Donahoo RS, Finley S, Huitema E, Hulvey J, Platt D, Salamov A, Savidor A, Sharma R, Stam R, Storey D, Thines M, Win J, Haas BJ, Dinwiddie DL, Jenkins J, Knight JR, Affourtit JP, Han CS, Chertkov O, Lindquist EA, Detter C, Grigoriev IV, Kamoun S, Kingsmore SF.

Mol Plant Microbe Interact. 2012 Oct;25(10):1350-60. doi: 10.1094/MPMI-02-12-0028-R.

29.

Genome evolution in filamentous plant pathogens: why bigger can be better.

Raffaele S, Kamoun S.

Nat Rev Microbiol. 2012 May 8;10(6):417-30. doi: 10.1038/nrmicro2790. Review.

PMID:
22565130
30.

Using hierarchical clustering of secreted protein families to classify and rank candidate effectors of rust fungi.

Saunders DG, Win J, Cano LM, Szabo LJ, Kamoun S, Raffaele S.

PLoS One. 2012;7(1):e29847. doi: 10.1371/journal.pone.0029847. Epub 2012 Jan 6.

31.

Understanding and exploiting late blight resistance in the age of effectors.

Vleeshouwers VG, Raffaele S, Vossen JH, Champouret N, Oliva R, Segretin ME, Rietman H, Cano LM, Lokossou A, Kessel G, Pel MA, Kamoun S.

Annu Rev Phytopathol. 2011;49:507-31. doi: 10.1146/annurev-phyto-072910-095326. Review.

PMID:
21663437
32.

Genome evolution following host jumps in the Irish potato famine pathogen lineage.

Raffaele S, Farrer RA, Cano LM, Studholme DJ, MacLean D, Thines M, Jiang RH, Zody MC, Kunjeti SG, Donofrio NM, Meyers BC, Nusbaum C, Kamoun S.

Science. 2010 Dec 10;330(6010):1540-3. doi: 10.1126/science.1193070.

33.

Analyses of genome architecture and gene expression reveal novel candidate virulence factors in the secretome of Phytophthora infestans.

Raffaele S, Win J, Cano LM, Kamoun S.

BMC Genomics. 2010 Nov 16;11:637. doi: 10.1186/1471-2164-11-637.

34.

Recent developments in effector biology of filamentous plant pathogens.

Oliva R, Win J, Raffaele S, Boutemy L, Bozkurt TO, Chaparro-Garcia A, Segretin ME, Stam R, Schornack S, Cano LM, van Damme M, Huitema E, Thines M, Banfield MJ, Kamoun S.

Cell Microbiol. 2010 Jul;12(7):1015. No abstract available.

PMID:
20636620
35.

Genome sequence of the necrotrophic plant pathogen Pythium ultimum reveals original pathogenicity mechanisms and effector repertoire.

Lévesque CA, Brouwer H, Cano L, Hamilton JP, Holt C, Huitema E, Raffaele S, Robideau GP, Thines M, Win J, Zerillo MM, Beakes GW, Boore JL, Busam D, Dumas B, Ferriera S, Fuerstenberg SI, Gachon CM, Gaulin E, Govers F, Grenville-Briggs L, Horner N, Hostetler J, Jiang RH, Johnson J, Krajaejun T, Lin H, Meijer HJ, Moore B, Morris P, Phuntmart V, Puiu D, Shetty J, Stajich JE, Tripathy S, Wawra S, van West P, Whitty BR, Coutinho PM, Henrissat B, Martin F, Thomas PD, Tyler BM, De Vries RP, Kamoun S, Yandell M, Tisserat N, Buell CR.

Genome Biol. 2010;11(7):R73. doi: 10.1186/gb-2010-11-7-r73. Epub 2010 Jul 13.

36.

Recent developments in effector biology of filamentous plant pathogens.

Oliva R, Win J, Raffaele S, Boutemy L, Bozkurt TO, Chaparro-Garcia A, Segretin ME, Stam R, Schornack S, Cano LM, van Damme M, Huitema E, Thines M, Banfield MJ, Kamoun S.

Cell Microbiol. 2010 Jun;12(6):705-15. doi: 10.1111/j.1462-5822.2010.01471.x. Epub 2010 Mar 31. Review. Erratum in: Cell Microbiol. 2010 Jul;12(7):1015.

PMID:
20374248
37.

A remorin protein interacts with symbiotic receptors and regulates bacterial infection.

Lefebvre B, Timmers T, Mbengue M, Moreau S, Hervé C, Tóth K, Bittencourt-Silvestre J, Klaus D, Deslandes L, Godiard L, Murray JD, Udvardi MK, Raffaele S, Mongrand S, Cullimore J, Gamas P, Niebel A, Ott T.

Proc Natl Acad Sci U S A. 2010 Feb 2;107(5):2343-8. doi: 10.1073/pnas.0913320107. Epub 2010 Jan 19.

38.

Ten things to know about oomycete effectors.

Schornack S, Huitema E, Cano LM, Bozkurt TO, Oliva R, Van Damme M, Schwizer S, Raffaele S, Chaparro-Garcia A, Farrer R, Segretin ME, Bos J, Haas BJ, Zody MC, Nusbaum C, Win J, Thines M, Kamoun S.

Mol Plant Pathol. 2009 Nov;10(6):795-803. doi: 10.1111/j.1364-3703.2009.00593.x. Review.

PMID:
19849785
39.
40.

Genome sequence and analysis of the Irish potato famine pathogen Phytophthora infestans.

Haas BJ, Kamoun S, Zody MC, Jiang RH, Handsaker RE, Cano LM, Grabherr M, Kodira CD, Raffaele S, Torto-Alalibo T, Bozkurt TO, Ah-Fong AM, Alvarado L, Anderson VL, Armstrong MR, Avrova A, Baxter L, Beynon J, Boevink PC, Bollmann SR, Bos JI, Bulone V, Cai G, Cakir C, Carrington JC, Chawner M, Conti L, Costanzo S, Ewan R, Fahlgren N, Fischbach MA, Fugelstad J, Gilroy EM, Gnerre S, Green PJ, Grenville-Briggs LJ, Griffith J, Grünwald NJ, Horn K, Horner NR, Hu CH, Huitema E, Jeong DH, Jones AM, Jones JD, Jones RW, Karlsson EK, Kunjeti SG, Lamour K, Liu Z, Ma L, Maclean D, Chibucos MC, McDonald H, McWalters J, Meijer HJ, Morgan W, Morris PF, Munro CA, O'Neill K, Ospina-Giraldo M, Pinzón A, Pritchard L, Ramsahoye B, Ren Q, Restrepo S, Roy S, Sadanandom A, Savidor A, Schornack S, Schwartz DC, Schumann UD, Schwessinger B, Seyer L, Sharpe T, Silvar C, Song J, Studholme DJ, Sykes S, Thines M, van de Vondervoort PJ, Phuntumart V, Wawra S, Weide R, Win J, Young C, Zhou S, Fry W, Meyers BC, van West P, Ristaino J, Govers F, Birch PR, Whisson SC, Judelson HS, Nusbaum C.

Nature. 2009 Sep 17;461(7262):393-8. doi: 10.1038/nature08358. Epub 2009 Sep 9.

PMID:
19741609
41.

Very long chain fatty acid and lipid signaling in the response of plants to pathogens.

Raffaele S, Leger A, Roby D.

Plant Signal Behav. 2009 Feb;4(2):94-9. Review.

42.

Remorin, a solanaceae protein resident in membrane rafts and plasmodesmata, impairs potato virus X movement.

Raffaele S, Bayer E, Lafarge D, Cluzet S, German Retana S, Boubekeur T, Leborgne-Castel N, Carde JP, Lherminier J, Noirot E, Satiat-Jeunemaître B, Laroche-Traineau J, Moreau P, Ott T, Maule AJ, Reymond P, Simon-Plas F, Farmer EE, Bessoule JJ, Mongrand S.

Plant Cell. 2009 May;21(5):1541-55. doi: 10.1105/tpc.108.064279. Epub 2009 May 26.

43.

The VLCFA elongase gene family in Arabidopsis thaliana: phylogenetic analysis, 3D modelling and expression profiling.

Joubès J, Raffaele S, Bourdenx B, Garcia C, Laroche-Traineau J, Moreau P, Domergue F, Lessire R.

Plant Mol Biol. 2008 Jul;67(5):547-66. doi: 10.1007/s11103-008-9339-z. Epub 2008 May 9.

PMID:
18465198
44.

A MYB transcription factor regulates very-long-chain fatty acid biosynthesis for activation of the hypersensitive cell death response in Arabidopsis.

Raffaele S, Vailleau F, Léger A, Joubès J, Miersch O, Huard C, Blée E, Mongrand S, Domergue F, Roby D.

Plant Cell. 2008 Mar;20(3):752-67. doi: 10.1105/tpc.107.054858. Epub 2008 Mar 7.

45.

Genome-wide annotation of remorins, a plant-specific protein family: evolutionary and functional perspectives.

Raffaele S, Mongrand S, Gamas P, Niebel A, Ott T.

Plant Physiol. 2007 Nov;145(3):593-600. No abstract available.

46.

An essential role for salicylic acid in AtMYB30-mediated control of the hypersensitive cell death program in Arabidopsis.

Raffaele S, Rivas S, Roby D.

FEBS Lett. 2006 Jun 12;580(14):3498-504. Epub 2006 May 15.

47.

Dental office computerization: common pitfalls and how to avoid them.

Fullerton L, Raffaele S.

J Gt Houst Dent Soc. 1991 Apr;62(9):5-6. No abstract available.

PMID:
2069762
48.

Dental office computerization: common pitfalls and how to avoid them.

Fullerton L, Raffaele S.

J Gt Houst Dent Soc. 1990 Nov;62(5):5-6. No abstract available.

PMID:
2278695

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