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Electron microscopy of Drosophila garland cell nephrocytes: Optimal preparation, immunostaining and STEM tomography.

Hochapfel F, Denk L, Maaßen C, Zaytseva Y, Rachel R, Witzgall R, Krahn MP.

J Cell Biochem. 2018 Jan 29. doi: 10.1002/jcb.26702. [Epub ahead of print]


Activity-Dependent Neuroplasticity Induced by an Enriched Environment Reverses Cognitive Deficits in Scribble Deficient Mouse.

Hilal ML, Moreau MM, Racca C, Pinheiro VL, Piguel NH, Santoni MJ, Dos Santos Carvalho S, Blanc JM, Abada YK, Peyroutou R, Medina C, Doat H, Papouin T, Vuillard L, Borg JP, Rachel R, Panatier A, Montcouquiol M, Oliet SHR, Sans N.

Cereb Cortex. 2017 Dec 1;27(12):5635-5651. doi: 10.1093/cercor/bhw333.


Distinct functions of Crumbs regulating slit diaphragms and endocytosis in Drosophila nephrocytes.

Hochapfel F, Denk L, Mendl G, Schulze U, Maaßen C, Zaytseva Y, Pavenstädt H, Weide T, Rachel R, Witzgall R, Krahn MP.

Cell Mol Life Sci. 2017 Dec;74(24):4573-4586. doi: 10.1007/s00018-017-2593-y. Epub 2017 Jul 17.


A Complex Endomembrane System in the Archaeon Ignicoccus hospitalis Tapped by Nanoarchaeum equitans.

Heimerl T, Flechsler J, Pickl C, Heinz V, Salecker B, Zweck J, Wanner G, Geimer S, Samson RY, Bell SD, Huber H, Wirth R, Wurch L, Podar M, Rachel R.

Front Microbiol. 2017 Jun 13;8:1072. doi: 10.3389/fmicb.2017.01072. eCollection 2017.


Structure and in situ organisation of the Pyrococcus furiosus archaellum machinery.

Daum B, Vonck J, Bellack A, Chaudhury P, Reichelt R, Albers SV, Rachel R, Kühlbrandt W.

Elife. 2017 Jun 27;6. pii: e27470. doi: 10.7554/eLife.27470.


Rectinema cohabitans gen. nov., sp. nov., a rod-shaped spirochaete isolated from an anaerobic naphthalene-degrading enrichment culture.

Koelschbach JS, Mouttaki H, Pickl C, Heipieper HJ, Rachel R, Lawson PA, Meckenstock RU.

Int J Syst Evol Microbiol. 2017 May;67(5):1288-1295. doi: 10.1099/ijsem.0.001799. Epub 2017 May 30.


In meso crystal structure of a novel membrane-associated octaheme cytochrome c from the Crenarchaeon Ignicoccus hospitalis.

Parey K, Fielding AJ, Sörgel M, Rachel R, Huber H, Ziegler C, Rajendran C.

FEBS J. 2016 Oct;283(20):3807-3820. doi: 10.1111/febs.13870. Epub 2016 Sep 19.


Archaeal flagellin combines a bacterial type IV pilin domain with an Ig-like domain.

Braun T, Vos MR, Kalisman N, Sherman NE, Rachel R, Wirth R, Schröder GF, Egelman EH.

Proc Natl Acad Sci U S A. 2016 Sep 13;113(37):10352-7. doi: 10.1073/pnas.1607756113. Epub 2016 Aug 30.


Influence of osmotic stress on desiccation and irradiation tolerance of (hyper)-thermophilic microorganisms.

Beblo-Vranesevic K, Galinski EA, Rachel R, Huber H, Rettberg P.

Arch Microbiol. 2017 Jan;199(1):17-28. doi: 10.1007/s00203-016-1269-6. Epub 2016 Jul 21.


Pulmonary involvement in systemic sclerosis: A clinical profile.

Deepa AS, Rachel RP, Ramchandran P, Devaraj U, Arnold SA, Shobha V, D'souza G.

Lung India. 2016 Mar-Apr;33(2):144-7. doi: 10.4103/0970-2113.177439.


Eisosomes promote the ability of Sur7 to regulate plasma membrane organization in Candida albicans.

Wang HX, Douglas LM, Veselá P, Rachel R, Malinsky J, Konopka JB.

Mol Biol Cell. 2016 May 15;27(10):1663-75. doi: 10.1091/mbc.E16-01-0065. Epub 2016 Mar 23.


Isolation of methanotrophic bacteria from termite gut.

Reuss J, Rachel R, Kämpfer P, Rabenstein A, Küver J, Dröge S, König H.

Microbiol Res. 2015 Oct;179:29-37. doi: 10.1016/j.micres.2015.06.003. Epub 2015 Jul 2.


Advanced electron microscopic techniques provide a deeper insight into the peculiar features of podocytes.

Burghardt T, Hochapfel F, Salecker B, Meese C, Gröne HJ, Rachel R, Wanner G, Krahn MP, Witzgall R.

Am J Physiol Renal Physiol. 2015 Dec 15;309(12):F1082-9. doi: 10.1152/ajprenal.00338.2015. Epub 2015 Sep 23.


Cytochromes c in Archaea: distribution, maturation, cell architecture, and the special case of Ignicoccus hospitalis.

Kletzin A, Heimerl T, Flechsler J, van Niftrik L, Rachel R, Klingl A.

Front Microbiol. 2015 May 12;6:439. doi: 10.3389/fmicb.2015.00439. eCollection 2015.


CEP290 alleles in mice disrupt tissue-specific cilia biogenesis and recapitulate features of syndromic ciliopathies.

Rachel RA, Yamamoto EA, Dewanjee MK, May-Simera HL, Sergeev YV, Hackett AN, Pohida K, Munasinghe J, Gotoh N, Wickstead B, Fariss RN, Dong L, Li T, Swaroop A.

Hum Mol Genet. 2015 Jul 1;24(13):3775-91. doi: 10.1093/hmg/ddv123. Epub 2015 Apr 9.


Pyrococcus furiosus flagella: biochemical and transcriptional analyses identify the newly detected flaB0 gene to encode the major flagellin.

Näther-Schindler DJ, Schopf S, Bellack A, Rachel R, Wirth R.

Front Microbiol. 2014 Dec 11;5:695. doi: 10.3389/fmicb.2014.00695. eCollection 2014.


Deletion of aryl hydrocarbon receptor AHR in mice leads to subretinal accumulation of microglia and RPE atrophy.

Kim SY, Yang HJ, Chang YS, Kim JW, Brooks M, Chew EY, Wong WT, Fariss RN, Rachel RA, Cogliati T, Qian H, Swaroop A.

Invest Ophthalmol Vis Sci. 2014 Aug 26;55(9):6031-40. doi: 10.1167/iovs.14-15091.


The Iho670 fibers of Ignicoccus hospitalis are anchored in the cell by a spherical structure located beneath the inner membrane.

Meyer C, Heimerl T, Wirth R, Klingl A, Rachel R.

J Bacteriol. 2014 Nov;196(21):3807-15. doi: 10.1128/JB.01861-14. Epub 2014 Aug 25.


Grappling archaea: ultrastructural analyses of an uncultivated, cold-loving archaeon, and its biofilm.

Perras AK, Wanner G, Klingl A, Mora M, Auerbach AK, Heinz V, Probst AJ, Huber H, Rachel R, Meck S, Moissl-Eichinger C.

Front Microbiol. 2014 Aug 5;5:397. doi: 10.3389/fmicb.2014.00397. eCollection 2014.


Life on the edge: functional genomic response of Ignicoccus hospitalis to the presence of Nanoarchaeum equitans.

Giannone RJ, Wurch LL, Heimerl T, Martin S, Yang Z, Huber H, Rachel R, Hettich RL, Podar M.

ISME J. 2015 Jan;9(1):101-14. doi: 10.1038/ismej.2014.112. Epub 2014 Jul 11.


Ciliopathy-associated gene Cc2d2a promotes assembly of subdistal appendages on the mother centriole during cilia biogenesis.

Veleri S, Manjunath SH, Fariss RN, May-Simera H, Brooks M, Foskett TA, Gao C, Longo TA, Liu P, Nagashima K, Rachel RA, Li T, Dong L, Swaroop A.

Nat Commun. 2014 Jun 20;5:4207. doi: 10.1038/ncomms5207.


Three multihaem cytochromes c from the hyperthermophilic archaeon Ignicoccus hospitalis: purification, properties and localization.

Naß B, Pöll U, Langer JD, Kreuter L, Küper U, Flechsler J, Heimerl T, Rachel R, Huber H, Kletzin A.

Microbiology. 2014 Jun;160(Pt 6):1278-89. doi: 10.1099/mic.0.077792-0. Epub 2014 Apr 4.


A new addition to the cell plan of anammox bacteria: "Candidatus Kuenenia stuttgartiensis" has a protein surface layer as the outermost layer of the cell.

van Teeseling MC, de Almeida NM, Klingl A, Speth DR, Op den Camp HJ, Rachel R, Jetten MS, van Niftrik L.

J Bacteriol. 2014 Jan;196(1):80-9. doi: 10.1128/JB.00988-13. Epub 2013 Oct 18.


Scrib is required for epithelial cell identity and prevents epithelial to mesenchymal transition in the mouse.

Yamben IF, Rachel RA, Shatadal S, Copeland NG, Jenkins NA, Warming S, Griep AE.

Dev Biol. 2013 Dec 1;384(1):41-52. doi: 10.1016/j.ydbio.2013.09.027. Epub 2013 Oct 1.


The impact of polyelectrolyte structure on the shape of nanoassemblies with cationic peptides.

Ferstl M, Drechsler M, Rachel R, Rischer M, Engel J, Backofen M, Goepferich A.

J Pharm Sci. 2013 Aug;102(8):2599-607. doi: 10.1002/jps.23619. Epub 2013 May 31.


Conditional knockdown of DNA methyltransferase 1 reveals a key role of retinal pigment epithelium integrity in photoreceptor outer segment morphogenesis.

Nasonkin IO, Merbs SL, Lazo K, Oliver VF, Brooks M, Patel K, Enke RA, Nellissery J, Jamrich M, Le YZ, Bharti K, Fariss RN, Rachel RA, Zack DJ, Rodriguez-Boulan EJ, Swaroop A.

Development. 2013 Mar;140(6):1330-41. doi: 10.1242/dev.086603. Epub 2013 Feb 13.


Photoreceptor sensory cilia and ciliopathies: focus on CEP290, RPGR and their interacting proteins.

Rachel RA, Li T, Swaroop A.

Cilia. 2012 Dec 3;1(1):22. doi: 10.1186/2046-2530-1-22.


Structural analysis suggests that renin is released by compound exocytosis.

Steppan D, Zügner A, Rachel R, Kurtz A.

Kidney Int. 2013 Feb;83(2):233-41. doi: 10.1038/ki.2012.392. Epub 2012 Dec 12.


Rrp5p, Noc1p and Noc2p form a protein module which is part of early large ribosomal subunit precursors in S. cerevisiae.

Hierlmeier T, Merl J, Sauert M, Perez-Fernandez J, Schultz P, Bruckmann A, Hamperl S, Ohmayer U, Rachel R, Jacob A, Hergert K, Deutzmann R, Griesenbeck J, Hurt E, Milkereit P, Baßler J, Tschochner H.

Nucleic Acids Res. 2013 Jan;41(2):1191-210. doi: 10.1093/nar/gks1056. Epub 2012 Dec 2.


Melanoregulin, product of the dsu locus, links the BLOC-pathway and OA1 in organelle biogenesis.

Rachel RA, Nagashima K, O'Sullivan TN, Frost LS, Stefano FP, Marigo V, Boesze-Battaglia K.

PLoS One. 2012;7(9):e42446. doi: 10.1371/journal.pone.0042446. Epub 2012 Sep 11.


Layer-by-layer coated gold nanoparticles: size-dependent delivery of DNA into cells.

Elbakry A, Wurster EC, Zaky A, Liebl R, Schindler E, Bauer-Kreisel P, Blunk T, Rachel R, Goepferich A, Breunig M.

Small. 2012 Dec 21;8(24):3847-56. doi: 10.1002/smll.201201112. Epub 2012 Aug 22.


A library of strictly linear poly(ethylene glycol)-poly(ethylene imine) diblock copolymers to perform structure-function relationship of non-viral gene carriers.

Bauhuber S, Liebl R, Tomasetti L, Rachel R, Goepferich A, Breunig M.

J Control Release. 2012 Sep 10;162(2):446-55. doi: 10.1016/j.jconrel.2012.07.017. Epub 2012 Jul 20.


Filaments from Ignicoccus hospitalis show diversity of packing in proteins containing N-terminal type IV pilin helices.

Yu X, Goforth C, Meyer C, Rachel R, Wirth R, Schröder GF, Egelman EH.

J Mol Biol. 2012 Sep 14;422(2):274-81. doi: 10.1016/j.jmb.2012.05.031. Epub 2012 May 30.


The unusual cell biology of the hyperthermophilic Crenarchaeon Ignicoccus hospitalis.

Huber H, Küper U, Daxer S, Rachel R.

Antonie Van Leeuwenhoek. 2012 Aug;102(2):203-19. doi: 10.1007/s10482-012-9748-5. Epub 2012 Jun 1. Review.


Archaeal tetrathionate hydrolase goes viral: secretion of a sulfur metabolism enzyme in the form of virus-like particles.

Krupovic M, Peixeiro N, Bettstetter M, Rachel R, Prangishvili D.

Appl Environ Microbiol. 2012 Aug;78(15):5463-5. doi: 10.1128/AEM.01186-12. Epub 2012 May 25.


Combining Cep290 and Mkks ciliopathy alleles in mice rescues sensory defects and restores ciliogenesis.

Rachel RA, May-Simera HL, Veleri S, Gotoh N, Choi BY, Murga-Zamalloa C, McIntyre JC, Marek J, Lopez I, Hackett AN, Zhang J, Brooks M, den Hollander AI, Beales PL, Li T, Jacobson SG, Sood R, Martens JR, Liu P, Friedman TB, Khanna H, Koenekoop RK, Kelley MW, Swaroop A.

J Clin Invest. 2012 Apr;122(4):1233-45. doi: 10.1172/JCI60981. Epub 2012 Mar 26. Erratum in: J Clin Invest. 2012 Aug 1;122(8):3025. Zhang, Jun [added].


Growth behavior and kinetics of self-assembled silica-carbonate biomorphs.

Kellermeier M, Melero-García E, Glaab F, Eiblmeier J, Kienle L, Rachel R, Kunz W, García-Ruiz JM.

Chemistry. 2012 Feb 20;18(8):2272-82. doi: 10.1002/chem.201102407. Epub 2012 Jan 19.


AMP-forming acetyl coenzyme A synthetase in the outermost membrane of the hyperthermophilic crenarchaeon Ignicoccus hospitalis.

Mayer F, Küper U, Meyer C, Daxer S, Müller V, Rachel R, Huber H.

J Bacteriol. 2012 Mar;194(6):1572-81. doi: 10.1128/JB.06130-11. Epub 2012 Jan 13.


Preservation of cone photoreceptors after a rapid yet transient degeneration and remodeling in cone-only Nrl-/- mouse retina.

Roger JE, Ranganath K, Zhao L, Cojocaru RI, Brooks M, Gotoh N, Veleri S, Hiriyanna A, Rachel RA, Campos MM, Fariss RN, Wong WT, Swaroop A.

J Neurosci. 2012 Jan 11;32(2):528-41. doi: 10.1523/JNEUROSCI.3591-11.2012.


Ultrastructure of the denitrifying methanotroph "Candidatus Methylomirabilis oxyfera," a novel polygon-shaped bacterium.

Wu ML, van Teeseling MC, Willems MJ, van Donselaar EG, Klingl A, Rachel R, Geerts WJ, Jetten MS, Strous M, van Niftrik L.

J Bacteriol. 2012 Jan;194(2):284-91. doi: 10.1128/JB.05816-11. Epub 2011 Oct 21.


Comparative investigations on in vitro serum stability of polymeric micelle formulations.

Miller T, Rachel R, Besheer A, Uezguen S, Weigandt M, Goepferich A.

Pharm Res. 2012 Feb;29(2):448-59. doi: 10.1007/s11095-011-0555-x. Epub 2011 Aug 31.


Proteomic characterization of cellular and molecular processes that enable the Nanoarchaeum equitans--Ignicoccus hospitalis relationship.

Giannone RJ, Huber H, Karpinets T, Heimerl T, Küper U, Rachel R, Keller M, Hettich RL, Podar M.

PLoS One. 2011;6(8):e22942. doi: 10.1371/journal.pone.0022942. Epub 2011 Aug 3.


Analysis of the surface proteins of Acidithiobacillus ferrooxidans strain SP5/1 and the new, pyrite-oxidizing Acidithiobacillus isolate HV2/2, and their possible involvement in pyrite oxidation.

Klingl A, Moissl-Eichinger C, Wanner G, Zweck J, Huber H, Thomm M, Rachel R.

Arch Microbiol. 2011 Dec;193(12):867-82. doi: 10.1007/s00203-011-0720-y. Epub 2011 Jun 23.


Accumulation of the Raf-1 kinase inhibitory protein (Rkip) is associated with Cep290-mediated photoreceptor degeneration in ciliopathies.

Murga-Zamalloa CA, Ghosh AK, Patil SB, Reed NA, Chan LS, Davuluri S, Peränen J, Hurd TW, Rachel RA, Khanna H.

J Biol Chem. 2011 Aug 12;286(32):28276-86. doi: 10.1074/jbc.M111.237560. Epub 2011 Jun 17.


Survival of thermophilic and hyperthermophilic microorganisms after exposure to UV-C, ionizing radiation and desiccation.

Beblo K, Douki T, Schmalz G, Rachel R, Wirth R, Huber H, Reitz G, Rettberg P.

Arch Microbiol. 2011 Nov;193(11):797-809. doi: 10.1007/s00203-011-0718-5. Epub 2011 Jun 3.


Hydrotrope-induced inversion of salt effects on the cloud point of an extended surfactant.

Klaus A, Tiddy GJ, Rachel R, Trinh AP, Maurer E, Touraud D, Kunz W.

Langmuir. 2011 Apr 19;27(8):4403-11. doi: 10.1021/la104744e. Epub 2011 Mar 28.


Complete genome sequence of Thermosphaera aggregans type strain (M11TL).

Spring S, Rachel R, Lapidus A, Davenport K, Tice H, Copeland A, Cheng JF, Lucas S, Chen F, Nolan M, Bruce D, Goodwin L, Pitluck S, Ivanova N, Mavromatis K, Ovchinnikova G, Pati A, Chen A, Palaniappan K, Land M, Hauser L, Chang YJ, Jeffries CC, Brettin T, Detter JC, Tapia R, Han C, Heimerl T, Weikl F, Brambilla E, Göker M, Bristow J, Eisen JA, Markowitz V, Hugenholtz P, Kyrpides NC, Klenk HP.

Stand Genomic Sci. 2010 Jun 15;2(3):245-59. doi: 10.4056/sigs.821804.


Cone photoreceptors are the main targets for gene therapy of NPHP5 (IQCB1) or NPHP6 (CEP290) blindness: generation of an all-cone Nphp6 hypomorph mouse that mimics the human retinal ciliopathy.

Cideciyan AV, Rachel RA, Aleman TS, Swider M, Schwartz SB, Sumaroka A, Roman AJ, Stone EM, Jacobson SG, Swaroop A.

Hum Mol Genet. 2011 Apr 1;20(7):1411-23. doi: 10.1093/hmg/ddr022. Epub 2011 Jan 18.


The bindosome is a structural component of the Sulfolobus solfataricus cell envelope.

Zolghadr B, Klingl A, Rachel R, Driessen AJ, Albers SV.

Extremophiles. 2011 Mar;15(2):235-44. doi: 10.1007/s00792-010-0353-0. Epub 2011 Jan 14.


The mode of cell wall growth in selected archaea is similar to the general mode of cell wall growth in bacteria as revealed by fluorescent dye analysis.

Wirth R, Bellack A, Bertl M, Bilek Y, Heimerl T, Herzog B, Leisner M, Probst A, Rachel R, Sarbu C, Schopf S, Wanner G.

Appl Environ Microbiol. 2011 Mar;77(5):1556-62. doi: 10.1128/AEM.02423-10. Epub 2010 Dec 17.

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