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Items: 1 to 50 of 93

1.

Exploring the Utility of Developer Exhaust.

Zhang J, Lam M, Wang S, Varma P, Nardi L, Olukotun K, Ré C.

Proc Second Workshop Data Manag End End Mach Learn (2018). 2018 Jun;2018. pii: 7. doi: 10.1145/3209889.3209895.

2.

Learning Compressed Transforms with Low Displacement Rank.

Thomas AT, Gu A, Dao T, Rudra A, Ré C.

Adv Neural Inf Process Syst. 2018 Dec;2018:9052-9060.

3.

Training Classifiers with Natural Language Explanations.

Hancock B, Bringmann M, Varma P, Liang P, Wang S, Ré C.

Proc Conf Assoc Comput Linguist Meet. 2018 Jul;2018:1884-1895.

4.

SIMBIO-SYS/STC stereo camera calibration: Geometrical distortion.

Simioni E, Da Deppo V, Re C, Slemer A, Capria MT, Ficai Veltroni I, Borrelli D, Dami M, Tommasi L, Mugnuolo R, Amoroso M, Longo F, Cremonese G.

Rev Sci Instrum. 2019 Apr;90(4):043106. doi: 10.1063/1.5085710.

PMID:
31042992
5.

Inhibition of the deubiquitinase USP8 corrects a Drosophila PINK1 model of mitochondria dysfunction.

von Stockum S, Sanchez-Martinez A, Corrà S, Chakraborty J, Marchesan E, Locatello L, Da Rè C, Cusumano P, Caicci F, Ferrari V, Costa R, Bubacco L, Rasotto MB, Szabo I, Whitworth AJ, Scorrano L, Ziviani E.

Life Sci Alliance. 2019 Apr 15;2(2). pii: e201900392. doi: 10.26508/lsa.201900392. Print 2019 Apr.

6.

Snorkel MeTaL: Weak Supervision for Multi-Task Learning.

Ratner A, Hancock B, Dunnmon J, Goldman R, Ré C.

Proc Second Workshop Data Manag End End Mach Learn (2018). 2018 Jun;2018. pii: 3. doi: 10.1145/3209889.3209898.

7.

Assessment of Convolutional Neural Networks for Automated Classification of Chest Radiographs.

Dunnmon JA, Yi D, Langlotz CP, Ré C, Rubin DL, Lungren MP.

Radiology. 2019 Feb;290(2):537-544. doi: 10.1148/radiol.2018181422. Epub 2018 Nov 13.

PMID:
30422093
8.

From a circle to a sphere: the ultrasound imaging of ovarian follicle with 2D and 3D technology.

Re C, Mignini Renzini M, Rodriguez A, Dal Canto M, Buccheri M, Sacchi S, Bartolucci S, Fadini R, La Marca A.

Gynecol Endocrinol. 2019 Mar;35(3):184-189. doi: 10.1080/09513590.2018.1522297. Epub 2018 Nov 3.

PMID:
30394144
9.

GABAA Modulation of S100B Secretion in Acute Hippocampal Slices and Astrocyte Cultures.

Vizuete AFK, Hansen F, Da Ré C, Leal MB, Galland F, Concli Leite M, Gonçalves CA.

Neurochem Res. 2019 Feb;44(2):301-311. doi: 10.1007/s11064-018-2675-8. Epub 2018 Nov 1.

PMID:
30387069
10.

A Cloud-Based Metabolite and Chemical Prioritization System for the Biology/Disease-Driven Human Proteome Project.

Yu KH, Lee TM, Chen YJ, Ré C, Kou SC, Chiang JH, Snyder M, Kohane IS.

J Proteome Res. 2018 Dec 7;17(12):4345-4357. doi: 10.1021/acs.jproteome.8b00378. Epub 2018 Aug 21.

PMID:
30094994
11.

Fonduer: Knowledge Base Construction from Richly Formatted Data.

Wu S, Hsiao L, Cheng X, Hancock B, Rekatsinas T, Levis P, Ré C.

Proc ACM SIGMOD Int Conf Manag Data. 2018 Jun;2018:1301-1316. doi: 10.1145/3183713.3183729.

12.

Common Genetic Basis of Eye and Pigment Loss in Two Distinct Cave Populations of the Isopod Crustacean Asellus aquaticus.

Re C, Fišer Ž, Perez J, Tacdol A, Trontelj P, Protas ME.

Integr Comp Biol. 2018 Sep 1;58(3):421-430. doi: 10.1093/icb/icy028.

PMID:
29790967
13.

Snorkel: Rapid Training Data Creation with Weak Supervision.

Ratner A, Bach SH, Ehrenberg H, Fries J, Wu S, Ré C.

Proceedings VLDB Endowment. 2017 Nov;11(3):269-282. doi: 10.14778/3157794.3157797.

14.

Glial glutamate transporters expression, glutamate uptake, and oxidative stress in an experimental rat model of intracerebral hemorrhage.

Neves JD, Vizuete AF, Nicola F, Da Ré C, Rodrigues AF, Schmitz F, Mestriner RG, Aristimunha D, Wyse ATS, Netto CA.

Neurochem Int. 2018 Jun;116:13-21. doi: 10.1016/j.neuint.2018.03.003. Epub 2018 Mar 9.

PMID:
29530755
15.

Systematic Protein Prioritization for Targeted Proteomics Studies through Literature Mining.

Yu KH, Lee TM, Wang CS, Chen YJ, Ré C, Kou SC, Chiang JH, Kohane IS, Snyder M.

J Proteome Res. 2018 Apr 6;17(4):1383-1396. doi: 10.1021/acs.jproteome.7b00772. Epub 2018 Mar 15.

PMID:
29505266
16.

Gaussian Quadrature for Kernel Features.

Dao T, De Sa C, Ré C.

Adv Neural Inf Process Syst. 2017 Dec;30:6109-6119.

17.

Understanding and Optimizing Asynchronous Low-Precision Stochastic Gradient Descent.

De Sa C, Feldman M, Ré C, Olukotun K.

Proc Int Symp Comput Archit. 2017 Jun;2017:561-574.

18.

Inferring Generative Model Structure with Static Analysis.

Varma P, He B, Bajaj P, Banerjee I, Khandwala N, Rubin DL, Ré C.

Adv Neural Inf Process Syst. 2017 Dec;30:239-249.

19.

Learning to Compose Domain-Specific Transformations for Data Augmentation.

Ratner AJ, Ehrenberg HR, Hussain Z, Dunnmon J, Ré C.

Adv Neural Inf Process Syst. 2017 Dec;30:3239-3249.

20.

Accelerated Stochastic Power Iteration.

De Sa C, He B, Mitliagkas I, Ré C, Xu P.

Proc Mach Learn Res. 2018;84:58-67.

21.

Representation Tradeoffs for Hyperbolic Embeddings.

De Sa C, Gu A, Ré C, Sala F.

Proc Mach Learn Res. 2018;80:4460-4469.

22.

A two-pronged progress in structured dense matrixvector multiplication.

De Sa C, Gu A, Puttagunta R, Ré C, Rudra A.

Proc Annu ACM SIAM Symp Discret Algorithms. 2018 Jan;2018:1060-1079.

23.

Machine learning and deep analytics for biocomputing: call for better explainability.

Petkovic D, Kobzik L, Re C.

Pac Symp Biocomput. 2018;23:623-627.

24.

Association of Omics Features with Histopathology Patterns in Lung Adenocarcinoma.

Yu KH, Berry GJ, Rubin DL, Ré C, Altman RB, Snyder M.

Cell Syst. 2017 Dec 27;5(6):620-627.e3. doi: 10.1016/j.cels.2017.10.014. Epub 2017 Nov 15.

25.

Predicting the Outcome after Acute Unilateral Vestibulopathy: Analysis of Vestibulo-ocular Reflex Gain and Catch-up Saccades.

Cerchiai N, Navari E, Sellari-Franceschini S, Re C, Casani AP.

Otolaryngol Head Neck Surg. 2018 Mar;158(3):527-533. doi: 10.1177/0194599817740327. Epub 2017 Nov 7.

PMID:
29110566
26.

Learning the Structure of Generative Models without Labeled Data.

Bach SH, He B, Ratner A, Ré C.

Proc Mach Learn Res. 2017 Aug;70:273-82.

27.

ShortFuse: Biomedical Time Series Representations in the Presence of Structured Information.

Fiterau M, Bhooshan S, Fries J, Bournhonesque C, Hicks J, Halilaj E, Ré C, Delp S.

Proc Mach Learn Res. 2017 Aug;68:59-74.

28.

Methylglyoxal Induces Changes in the Glyoxalase System and Impairs Glutamate Uptake Activity in Primary Astrocytes.

Hansen F, Galland F, Lirio F, de Souza DF, Da Ré C, Pacheco RF, Vizuete AF, Quincozes-Santos A, Leite MC, Gonçalves CA.

Oxid Med Cell Longev. 2017;2017:9574201. doi: 10.1155/2017/9574201. Epub 2017 Jun 8.

29.

Hyperammonemia compromises glutamate metabolism and reduces BDNF in the rat hippocampus.

Galland F, Negri E, Da Ré C, Fróes F, Strapazzon L, Guerra MC, Tortorelli LS, Gonçalves CA, Leite MC.

Neurotoxicology. 2017 Sep;62:46-55. doi: 10.1016/j.neuro.2017.05.006. Epub 2017 May 12.

30.

DeepDive: Declarative Knowledge Base Construction.

De Sa C, Ratner A, Ré C, Shin J, Wang F, Wu S, Zhang C.

SIGMOD Rec. 2016 Mar;45(1):60-67. Epub 2016 Feb 6.

31.

Extracting Databases from Dark Data with DeepDive.

Zhang C, Shin J, Ré C, Cafarella M, Niu F.

Proc ACM SIGMOD Int Conf Manag Data. 2016 Jun-Jul;2016:847-859. doi: 10.1145/2882903.2904442.

32.

EmptyHeaded: A Relational Engine for Graph Processing.

Aberger CR, Tu S, Olukotun K, Ré C.

Proc ACM SIGMOD Int Conf Manag Data. 2016 Jun-Jul;2016:431-446. doi: 10.1145/2882903.2915213.

33.

Data Programming: Creating Large Training Sets, Quickly.

Ratner A, De Sa C, Wu S, Selsam D, Ré C.

Adv Neural Inf Process Syst. 2016 Dec;29:3567-3575.

34.

Predicting non-small cell lung cancer prognosis by fully automated microscopic pathology image features.

Yu KH, Zhang C, Berry GJ, Altman RB, Ré C, Rubin DL, Snyder M.

Nat Commun. 2016 Aug 16;7:12474. doi: 10.1038/ncomms12474.

35.

Taming the Wild: A Unified Analysis of Hogwild!-Style Algorithms.

De Sa C, Zhang C, Olukotun K, Ré C.

Adv Neural Inf Process Syst. 2015 Dec;28:2656-2664.

36.

Caffe con Troll: Shallow Ideas to Speed Up Deep Learning.

Hadjis S, Abuzaid F, Zhang C, Ré C.

Proc Fourth Workshop Data Anal Scale Danac 2015 (2015). 2015 May-Jun;2015. pii: 2.

37.

Rapidly Mixing Gibbs Sampling for a Class of Factor Graphs Using Hierarchy Width.

De Sa C, Zhang C, Olukotun K, Ré C.

Adv Neural Inf Process Syst. 2015 Dec;28:3079-3087.

38.

A Database Framework for Classifier Engineering.

Kimelfeld B, Ré C.

CEUR Workshop Proc. 2015 May;1378. pii: http://ceur-ws.org/Vol-1378/AMW_2015_paper_1.pdf. Epub 2015 Jun 11. No abstract available.

39.

Mindtagger: A Demonstration of Data Labeling in Knowledge Base Construction.

Shin J, Ré C, Cafarella M.

Proceedings VLDB Endowment. 2015 Aug;8(12):1920-1923.

40.

Incremental Knowledge Base Construction Using DeepDive.

Shin J, Wu S, Wang F, De Sa C, Zhang C, Ré C.

Proceedings VLDB Endowment. 2015 Jul;8(11):1310-1321.

41.

[DIE TAKING CARE].

Re C.

Rev Enferm. 2016 Feb;39(2):18-25. Spanish.

PMID:
27101646
42.

Weighted SGD for ℓ p Regression with Randomized Preconditioning.

Yang J, Chow YL, Ré C, Mahoney MW.

Proc Annu ACM SIAM Symp Discret Algorithms. 2016 Jan;2016:558-569.

43.

Ensuring Rapid Mixing and Low Bias for Asynchronous Gibbs Sampling.

De Sa C, Olukotun K, Ré C.

JMLR Workshop Conf Proc. 2016;48:1567-1576.

44.

Scan Order in Gibbs Sampling: Models in Which it Matters and Bounds on How Much.

He B, De Sa C, Mitliagkas I, Ré C.

Adv Neural Inf Process Syst. 2016;29. pii: 6589.

45.

Identification of thyroid tumor cell vulnerabilities through a siRNA-based functional screening.

Anania M, Gasparri F, Cetti E, Fraietta I, Todoerti K, Miranda C, Mazzoni M, Re C, Colombo R, Ukmar G, Camisasca S, Pagliardini S, Pierotti M, Neri A, Galvani A, Greco A.

Oncotarget. 2015 Oct 27;6(33):34629-48. doi: 10.18632/oncotarget.5282.

46.

Large-scale extraction of gene interactions from full-text literature using DeepDive.

Mallory EK, Zhang C, Ré C, Altman RB.

Bioinformatics. 2016 Jan 1;32(1):106-13. doi: 10.1093/bioinformatics/btv476. Epub 2015 Sep 3.

47.

The mobilize center: an NIH big data to knowledge center to advance human movement research and improve mobility.

Ku JP, Hicks JL, Hastie T, Leskovec J, Ré C, Delp SL.

J Am Med Inform Assoc. 2015 Nov;22(6):1120-5. doi: 10.1093/jamia/ocv071. Epub 2015 Aug 13.

48.

Live birth rates in the different combinations of the Bologna criteria poor ovarian responders: a validation study.

La Marca A, Grisendi V, Giulini S, Sighinolfi G, Tirelli A, Argento C, Re C, Tagliasacchi D, Marsella T, Sunkara SK.

J Assist Reprod Genet. 2015 Jun;32(6):931-7. doi: 10.1007/s10815-015-0476-4. Epub 2015 May 1.

49.

Fetal thymus volume estimation by virtual organ computer-aided analysis in normal pregnancies.

Re C, Bertucci E, Weissmann-Brenner A, Achiron R, Mazza V, Gindes L.

J Ultrasound Med. 2015 May;34(5):847-52. doi: 10.7863/ultra.34.5.847.

PMID:
25911719
50.

A machine reading system for assembling synthetic paleontological databases.

Peters SE, Zhang C, Livny M, Ré C.

PLoS One. 2014 Dec 1;9(12):e113523. doi: 10.1371/journal.pone.0113523. eCollection 2014.

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