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Optimization of Acquisition and Analysis Methods for Clinical Dynamic Susceptibility Contrast MRI Using a Population-Based Digital Reference Object.

Semmineh NB, Bell LC, Stokes AM, Hu LS, Boxerman JL, Quarles CC.

AJNR Am J Neuroradiol. 2018 Nov;39(11):1981-1988. doi: 10.3174/ajnr.A5827. Epub 2018 Oct 11.


Trace elemental analysis of bulk uranium materials using an inline automated sample preparation technique for ICP-OES.

Quarles CD Jr, Manard BT, Wylie EM, Xu N.

Talanta. 2018 Dec 1;190:460-465. doi: 10.1016/j.talanta.2018.08.031. Epub 2018 Aug 11.


An automated micro-separation system for the chromatographic removal of uranium matrix for trace element analysis by ICP-OES.

Wylie EM, Manard BT, Quarles CD Jr, Meyers LA, Xu N.

Talanta. 2018 Nov 1;189:24-30. doi: 10.1016/j.talanta.2018.06.063. Epub 2018 Jun 20.


Assessment of renal fibrosis in murine diabetic nephropathy using quantitative magnetization transfer MRI.

Wang F, Katagiri D, Li K, Takahashi K, Wang S, Nagasaka S, Li H, Quarles CC, Zhang MZ, Shimizu A, Gore JC, Harris RC, Takahashi T.

Magn Reson Med. 2018 May 30. doi: 10.1002/mrm.27231. [Epub ahead of print]


Multisite Concordance of DSC-MRI Analysis for Brain Tumors: Results of a National Cancer Institute Quantitative Imaging Network Collaborative Project.

Schmainda KM, Prah MA, Rand SD, Liu Y, Logan B, Muzi M, Rane SD, Da X, Yen YF, Kalpathy-Cramer J, Chenevert TL, Hoff B, Ross B, Cao Y, Aryal MP, Erickson B, Korfiatis P, Dondlinger T, Bell L, Hu L, Kinahan PE, Quarles CC.

AJNR Am J Neuroradiol. 2018 Jun;39(6):1008-1016. doi: 10.3174/ajnr.A5675. Epub 2018 May 24.


Imaging vascular and hemodynamic features of the brain using dynamic susceptibility contrast and dynamic contrast enhanced MRI.

Quarles CC, Bell LC, Stokes AM.

Neuroimage. 2018 May 3. pii: S1053-8119(18)30389-6. doi: 10.1016/j.neuroimage.2018.04.069. [Epub ahead of print]


Toward uniform implementation of parametric map Digital Imaging and Communication in Medicine standard in multisite quantitative diffusion imaging studies.

Malyarenko D, Fedorov A, Bell L, Prah M, Hectors S, Arlinghaus L, Muzi M, Solaiyappan M, Jacobs M, Fung M, Shukla-Dave A, McManus K, Boss M, Taouli B, Yankeelov TE, Quarles CC, Schmainda K, Chenevert TL, Newitt DC.

J Med Imaging (Bellingham). 2018 Jan;5(1):011006. doi: 10.1117/1.JMI.5.1.011006. Epub 2017 Oct 30.


The effects of intravoxel contrast agent diffusion on the analysis of DCE-MRI data in realistic tissue domains.

Woodall RT, Barnes SL, Hormuth DA 2nd, Sorace AG, Quarles CC, Yankeelov TE.

Magn Reson Med. 2018 Jul;80(1):330-340. doi: 10.1002/mrm.26995. Epub 2017 Nov 8.


Multisite concordance of apparent diffusion coefficient measurements across the NCI Quantitative Imaging Network.

Newitt DC, Malyarenko D, Chenevert TL, Quarles CC, Bell L, Fedorov A, Fennessy F, Jacobs MA, Solaiyappan M, Hectors S, Taouli B, Muzi M, Kinahan PE, Schmainda KM, Prah MA, Taber EN, Kroenke C, Huang W, Arlinghaus LR, Yankeelov TE, Cao Y, Aryal M, Yen YF, Kalpathy-Cramer J, Shukla-Dave A, Fung M, Liang J, Boss M, Hylton N.

J Med Imaging (Bellingham). 2018 Jan;5(1):011003. doi: 10.1117/1.JMI.5.1.011003. Epub 2017 Oct 10.


Optimization of DSC MRI Echo Times for CBV Measurements Using Error Analysis in a Pilot Study of High-Grade Gliomas.

Bell LC, Does MD, Stokes AM, Baxter LC, Schmainda KM, Dueck AC, Quarles CC.

AJNR Am J Neuroradiol. 2017 Sep;38(9):1710-1715. doi: 10.3174/ajnr.A5295. Epub 2017 Jul 6.


A Population-Based Digital Reference Object (DRO) for Optimizing Dynamic Susceptibility Contrast (DSC)-MRI Methods for Clinical Trials.

Semmineh NB, Stokes AM, Bell LC, Boxerman JL, Quarles CC.

Tomography. 2017 Mar;3(1):41-49. doi: 10.18383/j.tom.2016.00286.


A study on the in vitro percutaneous absorption of silver nanoparticles in combination with aluminum chloride, methyl paraben or di-n-butyl phthalate.

Domeradzka-Gajda K, Nocuń M, Roszak J, Janasik B, Quarles CD Jr, Wąsowicz W, Grobelny J, Tomaszewska E, Celichowski G, Ranoszek-Soliwoda K, Cieślak M, Puchowicz D, Gonzalez JJ, Russo RE, Stępnik M.

Toxicol Lett. 2017 Apr 15;272:38-48. doi: 10.1016/j.toxlet.2017.03.006. Epub 2017 Mar 14.


In vivo neuroimaging and behavioral correlates in a rat model of chemotherapy-induced cognitive dysfunction.

Barry RL, Byun NE, Tantawy MN, Mackey CA, Wilson GH 3rd, Stark AJ, Flom MP, Gee LC, Quarles CC.

Brain Imaging Behav. 2018 Feb;12(1):87-95. doi: 10.1007/s11682-017-9674-2.


Quantitative [18F]FMISO PET Imaging Shows Reduction of Hypoxia Following Trastuzumab in a Murine Model of HER2+ Breast Cancer.

Sorace AG, Syed AK, Barnes SL, Quarles CC, Sanchez V, Kang H, Yankeelov TE.

Mol Imaging Biol. 2017 Feb;19(1):130-137. doi: 10.1007/s11307-016-0994-1.


Radiogenomics to characterize regional genetic heterogeneity in glioblastoma.

Hu LS, Ning S, Eschbacher JM, Baxter LC, Gaw N, Ranjbar S, Plasencia J, Dueck AC, Peng S, Smith KA, Nakaji P, Karis JP, Quarles CC, Wu T, Loftus JC, Jenkins RB, Sicotte H, Kollmeyer TM, O'Neill BP, Elmquist W, Hoxworth JM, Frakes D, Sarkaria J, Swanson KR, Tran NL, Li J, Mitchell JR.

Neuro Oncol. 2017 Jan;19(1):128-137. doi: 10.1093/neuonc/now135. Epub 2016 Aug 8.


Assessment of a simplified spin and gradient echo (sSAGE) approach for human brain tumor perfusion imaging.

Stokes AM, Skinner JT, Yankeelov T, Quarles CC.

Magn Reson Imaging. 2016 Nov;34(9):1248-1255. doi: 10.1016/j.mri.2016.07.004. Epub 2016 Jul 22.


Improving Perfusion Measurement in DSC-MR Imaging with Multiecho Information for Arterial Input Function Determination.

Newton AT, Pruthi S, Stokes AM, Skinner JT, Quarles CC.

AJNR Am J Neuroradiol. 2016 Jul;37(7):1237-43. doi: 10.3174/ajnr.A4700. Epub 2016 Mar 17.


Trastuzumab improves tumor perfusion and vascular delivery of cytotoxic therapy in a murine model of HER2+ breast cancer: preliminary results.

Sorace AG, Quarles CC, Whisenant JG, Hanker AB, McIntyre JO, Sanchez VM, Yankeelov TE.

Breast Cancer Res Treat. 2016 Jan;155(2):273-84. doi: 10.1007/s10549-016-3680-8. Epub 2016 Jan 20.


MR Imaging Biomarkers in Oncology Clinical Trials.

Abramson RG, Arlinghaus LR, Dula AN, Quarles CC, Stokes AM, Weis JA, Whisenant JG, Chekmenev EY, Zhukov I, Williams JM, Yankeelov TE.

Magn Reson Imaging Clin N Am. 2016 Feb;24(1):11-29. doi: 10.1016/j.mric.2015.08.002. Review.


Mapping murine diabetic kidney disease using chemical exchange saturation transfer MRI.

Wang F, Kopylov D, Zu Z, Takahashi K, Wang S, Quarles CC, Gore JC, Harris RC, Takahashi T.

Magn Reson Med. 2016 Nov;76(5):1531-1541. doi: 10.1002/mrm.26045. Epub 2015 Nov 26.


Intraarterial administration of norcantharidin attenuates ischemic stroke damage in rodents when given at the time of reperfusion: novel uses of endovascular capabilities.

Khan IS, Odom M, Ehtesham M, Colvin D, Quarles CC, McLaughlin B, Singer RJ.

J Neurosurg. 2016 Jul;125(1):152-9. doi: 10.3171/2015.4.JNS142400. Epub 2015 Nov 6.


On the Use of DSC-MRI for Measuring Vascular Permeability.

Skinner JT, Moots PL, Ayers GD, Quarles CC.

AJNR Am J Neuroradiol. 2016 Jan;37(1):80-7. doi: 10.3174/ajnr.A4478. Epub 2015 Oct 1.


Influence of water compartmentation and heterogeneous relaxation on quantitative magnetization transfer imaging in rodent brain tumors.

Li K, Li H, Zhang XY, Stokes AM, Jiang X, Kang H, Quarles CC, Zu Z, Gochberg DF, Gore JC, Xu J.

Magn Reson Med. 2016 Aug;76(2):635-44. doi: 10.1002/mrm.25893. Epub 2015 Sep 16.


Validation of a T1 and T2* leakage correction method based on multiecho dynamic susceptibility contrast MRI using MION as a reference standard.

Stokes AM, Semmineh N, Quarles CC.

Magn Reson Med. 2016 Aug;76(2):613-25. doi: 10.1002/mrm.25906. Epub 2015 Sep 12.


Current MRI techniques for the assessment of renal disease.

Takahashi T, Wang F, Quarles CC.

Curr Opin Nephrol Hypertens. 2015 May;24(3):217-23. doi: 10.1097/MNH.0000000000000122. Review.


Phosphatidylinositol 3-kinase signaling determines kidney size.

Chen JK, Nagai K, Chen J, Plieth D, Hino M, Xu J, Sha F, Ikizler TA, Quarles CC, Threadgill DW, Neilson EG, Harris RC.

J Clin Invest. 2015 Jun;125(6):2429-44. doi: 10.1172/JCI78945. Epub 2015 May 18.


A simplified spin and gradient echo approach for brain tumor perfusion imaging.

Stokes AM, Quarles CC.

Magn Reson Med. 2016 Jan;75(1):356-62. doi: 10.1002/mrm.25591. Epub 2015 Mar 5.


Modeling the effect of intra-voxel diffusion of contrast agent on the quantitative analysis of dynamic contrast enhanced magnetic resonance imaging.

Barnes SL, Quarles CC, Yankeelov TE.

PLoS One. 2014 Oct 2;9(9):e108726. doi: 10.1371/journal.pone.0108726. eCollection 2014.


Assessing tumor cytoarchitecture using multiecho DSC-MRI derived measures of the transverse relaxivity at tracer equilibrium (TRATE).

Semmineh NB, Xu J, Skinner JT, Xie J, Li H, Ayers G, Quarles CC.

Magn Reson Med. 2015 Sep;74(3):772-84. doi: 10.1002/mrm.25435. Epub 2014 Sep 16.


Evaluation of a multiple spin- and gradient-echo (SAGE) EPI acquisition with SENSE acceleration: applications for perfusion imaging in and outside the brain.

Skinner JT, Robison RK, Elder CP, Newton AT, Damon BM, Quarles CC.

Magn Reson Imaging. 2014 Dec;32(10):1171-80. doi: 10.1016/j.mri.2014.08.032. Epub 2014 Aug 29.


Assessment of a combined spin- and gradient-echo (SAGE) DSC-MRI method for preclinical neuroimaging.

Stokes AM, Skinner JT, Quarles CC.

Magn Reson Imaging. 2014 Dec;32(10):1181-90. doi: 10.1016/j.mri.2014.08.027. Epub 2014 Aug 28.


Quantitative multimodality imaging in cancer research and therapy.

Yankeelov TE, Abramson RG, Quarles CC.

Nat Rev Clin Oncol. 2014 Nov;11(11):670-80. doi: 10.1038/nrclinonc.2014.134. Epub 2014 Aug 12. Review.


Longitudinal assessment of mouse renal injury using high-resolution anatomic and magnetization transfer MR imaging.

Wang F, Jiang R, Takahashi K, Gore J, Harris RC, Takahashi T, Quarles CC.

Magn Reson Imaging. 2014 Nov;32(9):1125-32. doi: 10.1016/j.mri.2014.07.012. Epub 2014 Aug 2.


Nitrite induces the extravasation of iron oxide nanoparticles in hypoxic tumor tissue.

Mistry N, Stokes AM, Gambrell JV, Quarles CC.

NMR Biomed. 2014 Apr;27(4):425-30. doi: 10.1002/nbm.3078. Epub 2014 Jan 28.


Potential of compressed sensing in quantitative MR imaging of cancer.

Smith DS, Li X, Abramson RG, Quarles CC, Yankeelov TE, Welch EB.

Cancer Imaging. 2013 Dec 30;13(4):633-44. doi: 10.1102/1470-7330.2013.0041. Review.


An efficient computational approach to characterize DSC-MRI signals arising from three-dimensional heterogeneous tissue structures.

Semmineh NB, Xu J, Boxerman JL, Delaney GW, Cleary PW, Gore JC, Quarles CC.

PLoS One. 2014 Jan 8;9(1):e84764. doi: 10.1371/journal.pone.0084764. eCollection 2014.


Imaging amide proton transfer and nuclear overhauser enhancement using chemical exchange rotation transfer (CERT).

Zu Z, Xu J, Li H, Chekmenev EY, Quarles CC, Does MD, Gore JC, Gochberg DF.

Magn Reson Med. 2014 Aug;72(2):471-6. doi: 10.1002/mrm.24953. Epub 2013 Dec 2.


Repeatability and sensitivity of high resolution blood volume mapping in mouse kidney disease.

Wang F, Jiang RT, Tantawy MN, Borza DB, Takahashi K, Gore JC, Harris RC, Takahashi T, Quarles CC.

J Magn Reson Imaging. 2014 Apr;39(4):866-71. doi: 10.1002/jmri.24242. Epub 2013 Sep 4.


Assessment of renal function in mice with unilateral ureteral obstruction using 99mTc-MAG3 dynamic scintigraphy.

Tantawy MN, Jiang R, Wang F, Takahashi K, Peterson TE, Zemel D, Hao CM, Fujita H, Harris RC, Quarles CC, Takahashi T.

BMC Nephrol. 2012 Dec 10;13:168. doi: 10.1186/1471-2369-13-168.


Comparison of dual-echo DSC-MRI- and DCE-MRI-derived contrast agent kinetic parameters.

Quarles CC, Gore JC, Xu L, Yankeelov TE.

Magn Reson Imaging. 2012 Sep;30(7):944-53. doi: 10.1016/j.mri.2012.03.008. Epub 2012 May 21.


Robustness of quantitative compressive sensing MRI: the effect of random undersampling patterns on derived parameters for DCE- and DSC-MRI.

Smith DS, Li X, Gambrell JV, Arlinghaus LR, Quarles CC, Yankeelov TE, Welch EB.

IEEE Trans Med Imaging. 2012 Feb;31(2):504-11. doi: 10.1109/TMI.2011.2172216. Epub 2011 Oct 14.


Liquid sampling-atmospheric pressure glow discharge (LS-APGD) ionization source for elemental mass spectrometry: preliminary parametric evaluation and figures of merit.

Quarles CD Jr, Carado AJ, Barinaga CJ, Koppenaal DW, Marcus RK.

Anal Bioanal Chem. 2012 Jan;402(1):261-8. doi: 10.1007/s00216-011-5359-7. Epub 2011 Sep 12.


Metal retention in human transferrin: consequences of solvent composition in analytical sample preparation methods.

Quarles CD Jr, Randunu KM, Brumaghim JL, Marcus RK.

Metallomics. 2011 Oct;3(10):1027-34. doi: 10.1039/c1mt00094b. Epub 2011 Sep 9.


Nickel ions inhibit α-actin expression and decrease aspect ratio of rat vascular smooth muscle cells in vitro.

Winn B, Quarles CD Jr, Marcus RK, LaBerge M.

Metallomics. 2011 Sep;3(9):934-40. doi: 10.1039/c1mt00035g. Epub 2011 Jul 18.


Competitive binding of Fe3+, Cr3+, and Ni2+ to transferrin.

Quarles CD Jr, Marcus RK, Brumaghim JL.

J Biol Inorg Chem. 2011 Aug;16(6):913-21. doi: 10.1007/s00775-011-0792-9. Epub 2011 Jun 17.


Magnetic resonance in the era of molecular imaging of cancer.

Gore JC, Manning HC, Quarles CC, Waddell KW, Yankeelov TE.

Magn Reson Imaging. 2011 Jun;29(5):587-600. doi: 10.1016/j.mri.2011.02.003. Epub 2011 Apr 27. Review.


Instrumental comparison of the determination of Cr³+ uptake by human transferrin.

Quarles CD Jr, Brumaghim JL, Marcus RK.

Metallomics. 2010 Dec;2(12):792-9.


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