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Items: 32

1.

Draft Genomic Sequences of Streptomyces misionensis ACT66 and Streptomyces albidoflavus ACT77, Bacteria with Potential Application for Phytopathogen Biocontrol.

Pylro VS, Dias ACF, Andreote FD, Varani AM, Andreote CCF, Ribeiro IAF, Kitano IT, Bernardo ERA.

Microbiol Resour Announc. 2019 Sep 5;8(36). pii: e00949-19. doi: 10.1128/MRA.00949-19.

2.

Genomic signatures and co-occurrence patterns of the ultra-small Saccharimonadia (phylum CPR/Patescibacteria) suggest a symbiotic lifestyle.

Lemos LN, Medeiros JD, Dini-Andreote F, Fernandes GR, Varani AM, Oliveira G, Pylro VS.

Mol Ecol. 2019 Aug 25. doi: 10.1111/mec.15208. [Epub ahead of print]

PMID:
31446647
3.

Behavior and gut bacteria of Partamona helleri under sublethal exposure to a bioinsecticide and a leaf fertilizer.

Botina LL, Vélez M, Barbosa WF, Mendonça AC, Pylro VS, Tótola MR, Martins GF.

Chemosphere. 2019 Nov;234:187-195. doi: 10.1016/j.chemosphere.2019.06.048. Epub 2019 Jun 8.

PMID:
31212205
4.

Bacterial communities associated with anthracnose symptomatic and asymptomatic leaves of guarana, an endogenous tropical crop, and their pathogen antagonistic effects.

Bonatelli ML, Tsui S, Batista BD, Dourado MN, Kitajima EW, Andreote FD, Pylro VS, Pereira JO, de Azevedo JL, Quecine MC.

Arch Microbiol. 2019 May 23. doi: 10.1007/s00203-019-01677-1. [Epub ahead of print]

PMID:
31123792
5.

Closed Genome Sequence of Bacillus paralicheniformis Strain CBMAI 1303, a Bacterium Applied for Phytopathogen Biocontrol.

Pylro VS, Dias ACF, Andreote FD, Varani AM, Leite LR, Andreote CCF, Bernardo ERA, Martins TF.

Microbiol Resour Announc. 2019 Jan 17;8(3). pii: e01507-18. doi: 10.1128/MRA.01507-18. eCollection 2019 Jan.

6.

Moisture Is More Important than Temperature for Assembly of Both Potentially Active and Whole Prokaryotic Communities in Subtropical Grassland.

Lupatini M, Suleiman AKA, Jacques RJS, Lemos LN, Pylro VS, Van Veen JA, Kuramae EE, Roesch LFW.

Microb Ecol. 2019 Feb;77(2):460-470. doi: 10.1007/s00248-018-1310-1. Epub 2019 Jan 3.

PMID:
30607437
7.

BTW-Bioinformatics Through Windows: an easy-to-install package to analyze marker gene data.

Morais D, Roesch LFW, Redmile-Gordon M, Santos FG, Baldrian P, Andreote FD, Pylro VS.

PeerJ. 2018 Jul 30;6:e5299. doi: 10.7717/peerj.5299. eCollection 2018.

8.

Seasonal dynamics alter taxonomical and functional microbial profiles in Pampa biome soils under natural grasslands.

Barboza ADM, Pylro VS, Jacques RJS, Gubiani PI, de Quadros FLF, da Trindade JK, Triplett EW, Roesch L.

PeerJ. 2018 Jun 13;6:e4991. doi: 10.7717/peerj.4991. eCollection 2018.

9.

Closed Genome Sequence of Phytopathogen Biocontrol Agent Bacillus velezensis Strain AGVL-005, Isolated from Soybean.

Pylro VS, Dias ACF, Andreote FD, Morais DK, Varani AM, Andreote CCF, Bernardo ERA, Zucchi T.

Genome Announc. 2018 Feb 15;6(7). pii: e00057-18. doi: 10.1128/genomeA.00057-18.

10.

Differences in bacterial composition between men's and women's restrooms and other common areas within a public building.

Dobbler PCT, Laureano ÁM, Sarzi DS, Cañón ERP, Metz GF, de Freitas AS, Takagaki BM, D Oliveira CB, Pylro VS, Copetti AC, Victoria F, Redmile-Gordon M, Morais DK, Roesch LFW.

Antonie Van Leeuwenhoek. 2018 Apr;111(4):551-561. doi: 10.1007/s10482-017-0976-6. Epub 2017 Nov 10.

PMID:
29127623
11.

Aliphatic Hydrocarbon Enhances Phenanthrene Degradation by Autochthonous Prokaryotic Communities from a Pristine Seawater.

Rodrigues EM, Morais DK, Pylro VS, Redmile-Gordon M, de Oliveira JA, Roesch LFW, Cesar DE, Tótola MR.

Microb Ecol. 2018 Apr;75(3):688-700. doi: 10.1007/s00248-017-1078-8. Epub 2017 Oct 3.

PMID:
28971238
12.

Single-cell sequencing unveils the lifestyle and CRISPR-based population history of Hydrotalea sp. in acid mine drainage.

Medeiros JD, Leite LR, Pylro VS, Oliveira FS, Almeida VM, Fernandes GR, Salim ACM, Araújo FMG, Volpini AC, Oliveira G, Cuadros-Orellana S.

Mol Ecol. 2017 Oct;26(20):5541-5551. doi: 10.1111/mec.14294. Epub 2017 Sep 12.

PMID:
28802076
13.

Draft genome of Nocardia farcinica TRH1, a linear and polycyclic aromatic hydrocarbon-degrading bacterium isolated from the coast of Trindade Island, Brazil.

Rodrigues EM, Vidigal PMP, Pylro VS, Morais DK, Leite LR, Roesch LFW, Tótola MR.

Braz J Microbiol. 2017 Jul - Sep;48(3):391-392. doi: 10.1016/j.bjm.2016.09.014. Epub 2016 Dec 10.

14.

Metagenome sequencing of the microbial community of two Brazilian anthropogenic Amazon dark earth sites, Brazil.

Lemos LN, de Souza RC, de Souza Cannavan F, Patricio A, Pylro VS, Hanada RE, Mui TS.

Genom Data. 2016 Nov 14;10:167-168. eCollection 2016 Dec.

15.

Compositional shifts in bacterial communities associated with the coral Palythoa caribaeorum due to anthropogenic effects.

Paulino GV, Broetto L, Pylro VS, Landell MF.

Mar Pollut Bull. 2017 Jan 30;114(2):1024-1030. doi: 10.1016/j.marpolbul.2016.11.039. Epub 2016 Nov 24.

PMID:
27889074
16.

A Step Forward to Empower Global Microbiome Research Through Local Leadership.

Pylro VS, Mui TS, Rodrigues JLM, Andreote FD, Roesch LFW; Working Group Supporting the INCT Microbiome.

Trends Microbiol. 2016 Oct;24(10):767-771. doi: 10.1016/j.tim.2016.07.007. Epub 2016 Aug 5. No abstract available.

17.

Phenylketonuria and Gut Microbiota: A Controlled Study Based on Next-Generation Sequencing.

Pinheiro de Oliveira F, Mendes RH, Dobbler PT, Mai V, Pylro VS, Waugh SG, Vairo F, Refosco LF, Roesch LF, Schwartz IV.

PLoS One. 2016 Jun 23;11(6):e0157513. doi: 10.1371/journal.pone.0157513. eCollection 2016.

18.

ZIKV - CDB: A Collaborative Database to Guide Research Linking SncRNAs and ZIKA Virus Disease Symptoms.

Pylro VS, Oliveira FS, Morais DK, Cuadros-Orellana S, Pais FS, Medeiros JD, Geraldo JA, Gilbert J, Volpini AC, Fernandes GR.

PLoS Negl Trop Dis. 2016 Jun 22;10(6):e0004817. doi: 10.1371/journal.pntd.0004817. eCollection 2016 Jun.

19.

Draft Genome Sequence of Hydrotalea flava Strain CCUG 51397T.

Leite LR, Medeiros JD, Fernandes GR, Araújo F, Pylro VS, Salim AC, Volpini Â, Oliveira G, Cuadros-Orellana S.

Genome Announc. 2016 Jun 9;4(3). pii: e00527-16. doi: 10.1128/genomeA.00527-16.

20.

BMPOS: a Flexible and User-Friendly Tool Sets for Microbiome Studies.

Pylro VS, Morais DK, de Oliveira FS, Dos Santos FG, Lemos LN, Oliveira G, Roesch LF.

Microb Ecol. 2016 Aug;72(2):443-7. doi: 10.1007/s00248-016-0785-x. Epub 2016 May 24.

PMID:
27220974
21.

Misguided phylogenetic comparisons using DGGE excised bands may contaminate public sequence databases.

Pylro VS, Morais DK, Kalks KH, Roesch LF, Hirsch PR, Tótola MR, Yotoko K.

J Microbiol Methods. 2016 Jul;126:18-23. doi: 10.1016/j.mimet.2016.04.012. Epub 2016 Apr 22.

PMID:
27109483
22.

Draft Genome Sequence of "Acidibacillus ferrooxidans" ITV01, a Novel Acidophilic Firmicute Isolated from a Chalcopyrite Mine Drainage Site in Brazil.

Dall'Agnol H, Ñancucheo I, Johnson DB, Oliveira R, Leite L, Pylro VS, Holanda R, Grail B, Carvalho N, Nunes GL, Tzotzos G, Fernandes GR, Dutra J, Orellana SC, Oliveira G.

Genome Announc. 2016 Mar 17;4(2). pii: e01748-15. doi: 10.1128/genomeA.01748-15.

23.

Draft Genome of Rhodococcus rhodochrous TRN7, Isolated from the Coast of Trindade Island, Brazil.

Rodrigues EM, Pylro VS, Dobbler PT, Victoria F, Roesch LF, Tótola MR.

Genome Announc. 2016 Mar 3;4(2). pii: e01707-15. doi: 10.1128/genomeA.01707-15.

24.

Ecological succession reveals potential signatures of marine-terrestrial transition in salt marsh fungal communities.

Dini-Andreote F, Pylro VS, Baldrian P, van Elsas JD, Salles JF.

ISME J. 2016 Aug;10(8):1984-97. doi: 10.1038/ismej.2015.254. Epub 2016 Jan 29.

25.

Microbiology: Microbiome studies need local leaders.

Pylro VS, Morais DK, Roesch LF.

Nature. 2015 Dec 3;528(7580):39. doi: 10.1038/528039e. No abstract available.

PMID:
26632579
26.

Unexplored Brazilian oceanic island host high salt tolerant biosurfactant-producing bacterial strains.

da Silva FS, Pylro VS, Fernandes PL, Barcelos GS, Kalks KH, Schaefer CE, Tótola MR.

Extremophiles. 2015 May;19(3):561-72. doi: 10.1007/s00792-015-0740-7. Epub 2015 Feb 21.

PMID:
25701018
27.

Data analysis for 16S microbial profiling from different benchtop sequencing platforms.

Pylro VS, Roesch LF, Morais DK, Clark IM, Hirsch PR, Tótola MR.

J Microbiol Methods. 2014 Dec;107:30-7. doi: 10.1016/j.mimet.2014.08.018. Epub 2014 Sep 3.

28.

Brazilian Microbiome Project: revealing the unexplored microbial diversity--challenges and prospects.

Pylro VS, Roesch LF, Ortega JM, do Amaral AM, Tótola MR, Hirsch PR, Rosado AS, Góes-Neto A, da Costa da Silva AL, Rosa CA, Morais DK, Andreote FD, Duarte GF, de Melo IS, Seldin L, Lambais MR, Hungria M, Peixoto RS, Kruger RH, Tsai SM, Azevedo V; Brazilian Microbiome Project Organization Committee.

Microb Ecol. 2014 Feb;67(2):237-41. doi: 10.1007/s00248-013-0302-4. Epub 2013 Oct 31.

PMID:
24173537
29.

Calcium oxalate crystals in eucalypt ectomycorrhizae: morphochemical characterization.

Pylro VS, de Freitas AL, Otoni WC, da Silva IR, Borges AC, Costa MD.

PLoS One. 2013 Jul 2;8(7):e67685. doi: 10.1371/journal.pone.0067685. Print 2013.

30.

Detection of horizontal gene transfers from phylogenetic comparisons.

Pylro VS, Vespoli Lde S, Duarte GF, Yotoko KS.

Int J Evol Biol. 2012;2012:813015. doi: 10.1155/2012/813015. Epub 2012 May 23.

31.

The role of mycorrhization helper bacteria in the establishment and action of ectomycorrhizae associations.

Rigamonte TA, Pylro VS, Duarte GF.

Braz J Microbiol. 2010 Oct;41(4):832-40. doi: 10.1590/S1517-83822010000400002. Epub 2010 Dec 1.

32.

Characterization of bacterial strains capable of desulphurisation in soil and sediment samples from Antarctica.

Boniek D, Figueiredo D, Pylro VS, Duarte GF.

Extremophiles. 2010 Sep;14(5):475-81. doi: 10.1007/s00792-010-0326-3. Epub 2010 Aug 25.

PMID:
20737178

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