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Items: 1 to 50 of 253

1.

Emergence of the Asian lineage of Zika virus in Angola: an outbreak investigation.

Hill SC, Vasconcelos J, Neto Z, Jandondo D, Zé-Zé L, Aguiar RS, Xavier J, Thézé J, Mirandela M, Micolo Cândido AL, Vaz F, Sebastião CDS, Wu CH, Kraemer MUG, Melo A, Schamber-Reis BLF, de Azevedo GS, Tanuri A, Higa LM, Clemente C, da Silva SP, da Silva Candido D, Claro IM, Quibuco D, Domingos C, Pocongo B, Watts AG, Khan K, Alcantara LCJ, Sabino EC, Lackritz E, Pybus OG, Alves MJ, Afonso J, Faria NR.

Lancet Infect Dis. 2019 Oct;19(10):1138-1147. doi: 10.1016/S1473-3099(19)30293-2.

2.

Erratum: The multifurcating skyline plot.

Hoscheit P, Pybus OG.

Virus Evol. 2019 Sep 23;5(2):vez040. doi: 10.1093/ve/vez040. eCollection 2019 Jul.

3.

The multifurcating skyline plot.

Hoscheit P, Pybus OG.

Virus Evol. 2019 Aug 29;5(2):vez031. doi: 10.1093/ve/vez031. eCollection 2019 Jul. Erratum in: Virus Evol. 2019 Sep 23;5(2):vez040.

4.

Metagenomic Next-Generation Sequencing of the 2014 Ebola Virus Disease Outbreak in the Democratic Republic of the Congo.

Li T, Mbala-Kingebeni P, Naccache SN, Thézé J, Bouquet J, Federman S, Somasekar S, Yu G, Sanchez-San Martin C, Achari A, Schneider BS, Rimoin AW, Rambaut A, Nsio J, Mulembakani P, Ahuka-Mundeke S, Kapetshi J, Pybus OG, Muyembe-Tamfum JJ, Chiu CY.

J Clin Microbiol. 2019 Aug 26;57(9). pii: e00827-19. doi: 10.1128/JCM.00827-19. Print 2019 Sep.

5.

A computational method for the identification of Dengue, Zika and Chikungunya virus species and genotypes.

Fonseca V, Libin PJK, Theys K, Faria NR, Nunes MRT, Restovic MI, Freire M, Giovanetti M, Cuypers L, Nowé A, Abecasis A, Deforche K, Santiago GA, Siqueira IC, San EJ, Machado KCB, Azevedo V, Filippis AMB, Cunha RVD, Pybus OG, Vandamme AM, Alcantara LCJ, de Oliveira T.

PLoS Negl Trop Dis. 2019 May 8;13(5):e0007231. doi: 10.1371/journal.pntd.0007231. eCollection 2019 May.

6.

Comparative micro-epidemiology of pathogenic avian influenza virus outbreaks in a wild bird population.

Hill SC, Hansen R, Watson S, Coward V, Russell C, Cooper J, Essen S, Everest H, Parag KV, Fiddaman S, Reid S, Lewis N, Brookes SM, Smith AL, Sheldon B, Perrins CM, Brown IH, Pybus OG.

Philos Trans R Soc Lond B Biol Sci. 2019 Jun 24;374(1775):20180259. doi: 10.1098/rstb.2018.0259.

7.

Publisher Correction: Past and future spread of the arbovirus vectors Aedes aegypti and Aedes albopictus.

Kraemer MUG, Reiner RC Jr, Brady OJ, Messina JP, Gilbert M, Pigott DM, Yi D, Johnson K, Earl L, Marczak LB, Shirude S, Weaver ND, Bisanzio D, Perkins TA, Lai S, Lu X, Jones P, Coelho GE, Carvalho RG, Van Bortel W, Marsboom C, Hendrickx G, Schaffner F, Moore CG, Nax HH, Bengtsson L, Wetter E, Tatem AJ, Brownstein JS, Smith DL, Lambrechts L, Cauchemez S, Linard C, Faria NR, Pybus OG, Scott TW, Liu Q, Yu H, Wint GRW, Hay SI, Golding N.

Nat Microbiol. 2019 May;4(5):901. doi: 10.1038/s41564-019-0440-7.

PMID:
30962571
8.

Utilizing general human movement models to predict the spread of emerging infectious diseases in resource poor settings.

Kraemer MUG, Golding N, Bisanzio D, Bhatt S, Pigott DM, Ray SE, Brady OJ, Brownstein JS, Faria NR, Cummings DAT, Pybus OG, Smith DL, Tatem AJ, Hay SI, Reiner RC Jr.

Sci Rep. 2019 Mar 26;9(1):5151. doi: 10.1038/s41598-019-41192-3.

9.

Publisher Correction: Past and future spread of the arbovirus vectors Aedes aegypti and Aedes albopictus.

Kraemer MUG, Reiner RC Jr, Brady OJ, Messina JP, Gilbert M, Pigott DM, Yi D, Johnson K, Earl L, Marczak LB, Shirude S, Weaver ND, Bisanzio D, Perkins TA, Lai S, Lu X, Jones P, Coelho GE, Carvalho RG, Van Bortel W, Marsboom C, Hendrickx G, Schaffner F, Moore CG, Nax HH, Bengtsson L, Wetter E, Tatem AJ, Brownstein JS, Smith DL, Lambrechts L, Cauchemez S, Linard C, Faria NR, Pybus OG, Scott TW, Liu Q, Yu H, Wint GRW, Hay SI, Golding N.

Nat Microbiol. 2019 May;4(5):900. doi: 10.1038/s41564-019-0429-2.

PMID:
30903094
10.

Early Genomic Detection of Cosmopolitan Genotype of Dengue Virus Serotype 2, Angola, 2018.

Hill SC, Neto de Vasconcelos J, Granja BG, Thézé J, Jandondo D, Neto Z, Mirandela M, Sebastião CDS, Cândido ALM, Clemente C, Pereira da Silva S, de Oliveira T, Pybus OG, Faria NR, Afonso JM.

Emerg Infect Dis. 2019 Apr;25(4):784-787. doi: 10.3201/eid2504.180958.

11.

Genomic, epidemiological and digital surveillance of Chikungunya virus in the Brazilian Amazon.

Naveca FG, Claro I, Giovanetti M, de Jesus JG, Xavier J, Iani FCM, do Nascimento VA, de Souza VC, Silveira PP, Lourenço J, Santillana M, Kraemer MUG, Quick J, Hill SC, Thézé J, Carvalho RDO, Azevedo V, Salles FCDS, Nunes MRT, Lemos PDS, Candido DDS, Pereira GC, Oliveira MAA, Meneses CAR, Maito RM, Cunha CRSB, Campos DPS, Castilho MDC, Siqueira TCDS, Terra TM, de Albuquerque CFC, da Cruz LN, Abreu AL, Martins DV, Simoes DSMV, Aguiar RS, Luz SLB, Loman N, Pybus OG, Sabino EC, Okumoto O, Alcantara LCJ, Faria NR.

PLoS Negl Trop Dis. 2019 Mar 7;13(3):e0007065. doi: 10.1371/journal.pntd.0007065. eCollection 2019 Mar.

12.

Past and future spread of the arbovirus vectors Aedes aegypti and Aedes albopictus.

Kraemer MUG, Reiner RC Jr, Brady OJ, Messina JP, Gilbert M, Pigott DM, Yi D, Johnson K, Earl L, Marczak LB, Shirude S, Davis Weaver N, Bisanzio D, Perkins TA, Lai S, Lu X, Jones P, Coelho GE, Carvalho RG, Van Bortel W, Marsboom C, Hendrickx G, Schaffner F, Moore CG, Nax HH, Bengtsson L, Wetter E, Tatem AJ, Brownstein JS, Smith DL, Lambrechts L, Cauchemez S, Linard C, Faria NR, Pybus OG, Scott TW, Liu Q, Yu H, Wint GRW, Hay SI, Golding N.

Nat Microbiol. 2019 May;4(5):854-863. doi: 10.1038/s41564-019-0376-y. Epub 2019 Mar 4. Erratum in: Nat Microbiol. 2019 Mar 21;:. Nat Microbiol. 2019 Apr 8;:.

13.

Tracing the Impact of Public Health Interventions on HIV-1 Transmission in Portugal Using Molecular Epidemiology.

Vasylyeva TI, du Plessis L, Pineda-Peña AC, Kühnert D, Lemey P, Vandamme AM, Gomes P, Camacho RJ, Pybus OG, Abecasis AB, Faria NR.

J Infect Dis. 2019 Jun 19;220(2):233-243. doi: 10.1093/infdis/jiz085.

14.

Reverse immunodynamics: a new method for identifying targets of protective immunity.

Spensley KJ, Wikramaratna PS, Penman BS, Walker A, Smith AL, Pybus OG, Jean L, Gupta S, Lourenço J.

Sci Rep. 2019 Feb 15;9(1):2164. doi: 10.1038/s41598-018-37288-x.

15.

Precision epidemiology for infectious disease control.

Ladner JT, Grubaugh ND, Pybus OG, Andersen KG.

Nat Med. 2019 Feb;25(2):206-211. doi: 10.1038/s41591-019-0345-2. Epub 2019 Feb 6. Review.

PMID:
30728537
16.

Robust Design for Coalescent Model Inference.

Parag KV, Pybus OG.

Syst Biol. 2019 Sep 1;68(5):730-743. doi: 10.1093/sysbio/syz008.

PMID:
30726979
17.

Parallel molecular evolution and adaptation in viruses.

Gutierrez B, Escalera-Zamudio M, Pybus OG.

Curr Opin Virol. 2019 Feb;34:90-96. doi: 10.1016/j.coviro.2018.12.006. Epub 2019 Jan 28. Review.

PMID:
30703578
18.

High-Resolution Evolutionary Analysis of Within-Host Hepatitis C Virus Infection.

Raghwani J, Wu CH, Ho CKY, De Jong M, Molenkamp R, Schinkel J, Pybus OG, Lythgoe KA.

J Infect Dis. 2019 May 5;219(11):1722-1729. doi: 10.1093/infdis/jiy747.

19.

A Protective Monoclonal Antibody Targets a Site of Vulnerability on the Surface of Rift Valley Fever Virus.

Allen ER, Krumm SA, Raghwani J, Halldorsson S, Elliott A, Graham VA, Koudriakova E, Harlos K, Wright D, Warimwe GM, Brennan B, Huiskonen JT, Dowall SD, Elliott RM, Pybus OG, Burton DR, Hewson R, Doores KJ, Bowden TA.

Cell Rep. 2018 Dec 26;25(13):3750-3758.e4. doi: 10.1016/j.celrep.2018.12.001.

20.

Tracking virus outbreaks in the twenty-first century.

Grubaugh ND, Ladner JT, Lemey P, Pybus OG, Rambaut A, Holmes EC, Andersen KG.

Nat Microbiol. 2019 Jan;4(1):10-19. doi: 10.1038/s41564-018-0296-2. Epub 2018 Dec 13. Review.

21.

Transmission dynamics of re-emerging rabies in domestic dogs of rural China.

Tian H, Feng Y, Vrancken B, Cazelles B, Tan H, Gill MS, Yang Q, Li Y, Yang W, Zhang Y, Zhang Y, Lemey P, Pybus OG, Stenseth NC, Zhang H, Dellicour S.

PLoS Pathog. 2018 Dec 6;14(12):e1007392. doi: 10.1371/journal.ppat.1007392. eCollection 2018 Dec.

22.

The Changing Epidemiological Profile of HIV-1 Subtype B Epidemic in Ukraine.

Vasylyeva TI, Liulchuk M, du Plessis L, Fearnhill E, Zadorozhna V, Babii N, Scherbinska A, Novitsky V, Pybus OG, Faria NR.

AIDS Res Hum Retroviruses. 2019 Feb;35(2):155-163. doi: 10.1089/AID.2018.0167. Epub 2019 Jan 14.

23.

Reconstruction and prediction of viral disease epidemics.

Kraemer MUG, Cummings DAT, Funk S, Reiner RC, Faria NR, Pybus OG, Cauchemez S.

Epidemiol Infect. 2018 Nov 5:1-7. doi: 10.1017/S0950268818002881. [Epub ahead of print]

24.

Highly Diverse Hepatitis C Strains Detected in Sub-Saharan Africa Have Unknown Susceptibility to Direct-Acting Antiviral Treatments.

Davis C, Mgomella GS, da Silva Filipe A, Frost EH, Giroux G, Hughes J, Hogan C, Kaleebu P, Asiki G, McLauchlan J, Niebel M, Ocama P, Pomila C, Pybus OG, Pépin J, Simmonds P, Singer JB, Sreenu VB, Wekesa C, Young EH, Murphy DG, Sandhu M, Thomson EC.

Hepatology. 2019 Apr;69(4):1426-1441. doi: 10.1002/hep.30342. Epub 2019 Mar 22.

25.

Molecular archaeoparasitology identifies cultural changes in the Medieval Hanseatic trading centre of Lübeck.

Flammer PG, Dellicour S, Preston SG, Rieger D, Warren S, Tan CKW, Nicholson R, Přichystalová R, Bleicher N, Wahl J, Faria NR, Pybus OG, Pollard M, Smith AL.

Proc Biol Sci. 2018 Oct 3;285(1888). pii: 20180991. doi: 10.1098/rspb.2018.0991.

26.

A naturally protective epitope of limited variability as an influenza vaccine target.

Thompson CP, Lourenço J, Walters AA, Obolski U, Edmans M, Palmer DS, Kooblall K, Carnell GW, O'Connor D, Bowden TA, Pybus OG, Pollard AJ, Temperton NJ, Lambe T, Gilbert SC, Gupta S.

Nat Commun. 2018 Sep 21;9(1):3859. doi: 10.1038/s41467-018-06228-8.

27.

Molecular Evolution, Diversity, and Adaptation of Influenza A(H7N9) Viruses in China.

Lu J, Raghwani J, Pryce R, Bowden TA, Thézé J, Huang S, Song Y, Zou L, Liang L, Bai R, Jing Y, Zhou P, Kang M, Yi L, Wu J, Pybus OG, Ke C.

Emerg Infect Dis. 2018 Oct;24(10):1795-1805. doi: 10.3201/eid2410.171063.

28.

Where do all the subtypes go? Temporal dynamics of H8-H12 influenza A viruses in waterfowl.

Wille M, Latorre-Margalef N, Tolf C, Halpin R, Wentworth D, Fouchier RAM, Raghwani J, Pybus OG, Olsen B, Waldenström J.

Virus Evol. 2018 Aug 14;4(2):vey025. doi: 10.1093/ve/vey025. eCollection 2018 Jul.

29.

Genomic and epidemiological monitoring of yellow fever virus transmission potential.

Faria NR, Kraemer MUG, Hill SC, Goes de Jesus J, Aguiar RS, Iani FCM, Xavier J, Quick J, du Plessis L, Dellicour S, Thézé J, Carvalho RDO, Baele G, Wu CH, Silveira PP, Arruda MB, Pereira MA, Pereira GC, Lourenço J, Obolski U, Abade L, Vasylyeva TI, Giovanetti M, Yi D, Weiss DJ, Wint GRW, Shearer FM, Funk S, Nikolay B, Fonseca V, Adelino TER, Oliveira MAA, Silva MVF, Sacchetto L, Figueiredo PO, Rezende IM, Mello EM, Said RFC, Santos DA, Ferraz ML, Brito MG, Santana LF, Menezes MT, Brindeiro RM, Tanuri A, Dos Santos FCP, Cunha MS, Nogueira JS, Rocco IM, da Costa AC, Komninakis SCV, Azevedo V, Chieppe AO, Araujo ESM, Mendonça MCL, Dos Santos CC, Dos Santos CD, Mares-Guia AM, Nogueira RMR, Sequeira PC, Abreu RG, Garcia MHO, Abreu AL, Okumoto O, Kroon EG, de Albuquerque CFC, Lewandowski K, Pullan ST, Carroll M, de Oliveira T, Sabino EC, Souza RP, Suchard MA, Lemey P, Trindade GS, Drumond BP, Filippis AMB, Loman NJ, Cauchemez S, Alcantara LCJ, Pybus OG.

Science. 2018 Aug 31;361(6405):894-899. doi: 10.1126/science.aat7115. Epub 2018 Aug 23.

30.

Genomic surveillance of avian-origin influenza A viruses causing human disease.

Lam TT, Pybus OG.

Genome Med. 2018 Jun 27;10(1):50. doi: 10.1186/s13073-018-0560-3. Review.

31.

Phylodynamic assessment of intervention strategies for the West African Ebola virus outbreak.

Dellicour S, Baele G, Dudas G, Faria NR, Pybus OG, Suchard MA, Rambaut A, Lemey P.

Nat Commun. 2018 Jun 8;9(1):2222. doi: 10.1038/s41467-018-03763-2.

32.

Genomic Epidemiology Reconstructs the Introduction and Spread of Zika Virus in Central America and Mexico.

Thézé J, Li T, du Plessis L, Bouquet J, Kraemer MUG, Somasekar S, Yu G, de Cesare M, Balmaseda A, Kuan G, Harris E, Wu CH, Ansari MA, Bowden R, Faria NR, Yagi S, Messenger S, Brooks T, Stone M, Bloch EM, Busch M, Muñoz-Medina JE, González-Bonilla CR, Wolinsky S, López S, Arias CF, Bonsall D, Chiu CY, Pybus OG.

Cell Host Microbe. 2018 Jun 13;23(6):855-864.e7. doi: 10.1016/j.chom.2018.04.017. Epub 2018 May 24.

33.

Exact Bayesian inference for phylogenetic birth-death models.

Parag KV, Pybus OG.

Bioinformatics. 2018 Nov 1;34(21):3638-3645. doi: 10.1093/bioinformatics/bty337.

PMID:
29718104
34.

Westward Spread of Highly Pathogenic Avian Influenza A(H7N9) Virus among Humans, China.

Yang Q, Shi W, Zhang L, Xu Y, Xu J, Li S, Zhang J, Hu K, Ma C, Zhao X, Li X, Liu F, Tong X, Zhang G, Yu P, Pybus OG, Tian H.

Emerg Infect Dis. 2018 Jun;24(6):1095-1098. doi: 10.3201/eid2406.171135. Epub 2018 Jun 17.

35.

Genomic Insights into Zika Virus Emergence and Spread.

Grubaugh ND, Faria NR, Andersen KG, Pybus OG.

Cell. 2018 Mar 8;172(6):1160-1162. doi: 10.1016/j.cell.2018.02.027.

36.

Hologenomic adaptations underlying the evolution of sanguivory in the common vampire bat.

Zepeda Mendoza ML, Xiong Z, Escalera-Zamudio M, Runge AK, Thézé J, Streicker D, Frank HK, Loza-Rubio E, Liu S, Ryder OA, Samaniego Castruita JA, Katzourakis A, Pacheco G, Taboada B, Löber U, Pybus OG, Li Y, Rojas-Anaya E, Bohmann K, Carmona Baez A, Arias CF, Liu S, Greenwood AD, Bertelsen MF, White NE, Bunce M, Zhang G, Sicheritz-Pontén T, Gilbert MPT.

Nat Ecol Evol. 2018 Apr;2(4):659-668. doi: 10.1038/s41559-018-0476-8. Epub 2018 Feb 19.

37.

Molecular epidemiology reveals the role of war in the spread of HIV in Ukraine.

Vasylyeva TI, Liulchuk M, Friedman SR, Sazonova I, Faria NR, Katzourakis A, Babii N, Scherbinska A, Thézé J, Pybus OG, Smyrnov P, Mbisa JL, Paraskevis D, Hatzakis A, Magiorkinis G.

Proc Natl Acad Sci U S A. 2018 Jan 30;115(5):1051-1056. doi: 10.1073/pnas.1701447115. Epub 2018 Jan 16.

38.

Rapid HIV disease progression following superinfection in an HLA-B*27:05/B*57:01-positive transmission recipient.

Brener J, Gall A, Hurst J, Batorsky R, Lavandier N, Chen F, Edwards A, Bolton C, Dsouza R, Allen T, Pybus OG, Kellam P, Matthews PC, Goulder PJR.

Retrovirology. 2018 Jan 16;15(1):7. doi: 10.1186/s12977-018-0390-9.

39.

The Effect of RNA Substitution Models on Viroid and RNA Virus Phylogenies.

Patiño-Galindo JÁ, González-Candelas F, Pybus OG.

Genome Biol Evol. 2018 Feb 1;10(2):657-666. doi: 10.1093/gbe/evx273.

40.

Genome-wide evolutionary dynamics of influenza B viruses on a global scale.

Langat P, Raghwani J, Dudas G, Bowden TA, Edwards S, Gall A, Bedford T, Rambaut A, Daniels RS, Russell CA, Pybus OG, McCauley J, Kellam P, Watson SJ.

PLoS Pathog. 2017 Dec 28;13(12):e1006749. doi: 10.1371/journal.ppat.1006749. eCollection 2017 Dec.

41.

The generation of a simian adenoviral vectored HCV vaccine encoding genetically conserved gene segments to target multiple HCV genotypes.

von Delft A, Donnison TA, Lourenço J, Hutchings C, Mullarkey CE, Brown A, Pybus OG, Klenerman P, Chinnakannan S, Barnes E.

Vaccine. 2018 Jan 4;36(2):313-321. doi: 10.1016/j.vaccine.2017.10.079. Epub 2017 Dec 2.

42.

Genomic and epidemiological characterisation of a dengue virus outbreak among blood donors in Brazil.

Faria NR, da Costa AC, Lourenço J, Loureiro P, Lopes ME, Ribeiro R, Alencar CS, Kraemer MUG, Villabona-Arenas CJ, Wu CH, Thézé J, Khan K, Brent SE, Romano C, Delwart E, Custer B, Busch MP, Pybus OG, Sabino EC; NHLBI Recipient Epidemiology and Donor Evaluation Study-III (REDS-III).

Sci Rep. 2017 Nov 9;7(1):15216. doi: 10.1038/s41598-017-15152-8.

43.

Role of HIV-specific CD8+ T cells in pediatric HIV cure strategies after widespread early viral escape.

Leitman EM, Thobakgale CF, Adland E, Ansari MA, Raghwani J, Prendergast AJ, Tudor-Williams G, Kiepiela P, Hemelaar J, Brener J, Tsai MH, Mori M, Riddell L, Luzzi G, Jooste P, Ndung'u T, Walker BD, Pybus OG, Kellam P, Naranbhai V, Matthews PC, Gall A, Goulder PJR.

J Exp Med. 2017 Nov 6;214(11):3239-3261. doi: 10.1084/jem.20162123. Epub 2017 Oct 5.

44.

Spread of Chikungunya Virus East/Central/South African Genotype in Northeast Brazil.

Charlys da Costa A, Thézé J, Komninakis SCV, Sanz-Duro RL, Felinto MRL, Moura LCC, Barroso IMO, Santos LEC, Nunes MAL, Moura AA, Lourenço J, Deng X, Delwart EL, Guimarães MRDAS, Pybus OG, Sabino EC, Faria NR.

Emerg Infect Dis. 2017 Oct;23(10):1742-1744. doi: 10.3201/eid2310.170307.

45.

Epidemiological and ecological determinants of Zika virus transmission in an urban setting.

Lourenço J, Maia de Lima M, Faria NR, Walker A, Kraemer MU, Villabona-Arenas CJ, Lambert B, Marques de Cerqueira E, Pybus OG, Alcantara LC, Recker M.

Elife. 2017 Sep 9;6. pii: e29820. doi: 10.7554/eLife.29820.

46.

A10 The evolution and molecular epidemiology of epidemic GII.17 noroviruses.

Lu J, Fang L, Zheng H, Lao J, Yang F, Sun L, Xiao J, Lin J, Song T, Raghwani J, Ke C, Faria NR, Bowden TA, Pybus OG, Li H.

Virus Evol. 2017 Mar 5;3(Suppl 1). pii: vew036.009. doi: 10.1093/ve/vew036.009. eCollection 2017 Mar. No abstract available.

47.

Increasing airline travel may facilitate co-circulation of multiple dengue virus serotypes in Asia.

Tian H, Sun Z, Faria NR, Yang J, Cazelles B, Huang S, Xu B, Yang Q, Pybus OG, Xu B.

PLoS Negl Trop Dis. 2017 Aug 3;11(8):e0005694. doi: 10.1371/journal.pntd.0005694. eCollection 2017 Aug.

48.

Rapid outbreak sequencing of Ebola virus in Sierra Leone identifies transmission chains linked to sporadic cases.

Arias A, Watson SJ, Asogun D, Tobin EA, Lu J, Phan MVT, Jah U, Wadoum REG, Meredith L, Thorne L, Caddy S, Tarawalie A, Langat P, Dudas G, Faria NR, Dellicour S, Kamara A, Kargbo B, Kamara BO, Gevao S, Cooper D, Newport M, Horby P, Dunning J, Sahr F, Brooks T, Simpson AJH, Groppelli E, Liu G, Mulakken N, Rhodes K, Akpablie J, Yoti Z, Lamunu M, Vitto E, Otim P, Owilli C, Boateng I, Okoror L, Omomoh E, Oyakhilome J, Omiunu R, Yemisis I, Adomeh D, Ehikhiametalor S, Akhilomen P, Aire C, Kurth A, Cook N, Baumann J, Gabriel M, Wölfel R, Di Caro A, Carroll MW, Günther S, Redd J, Naidoo D, Pybus OG, Rambaut A, Kellam P, Goodfellow I, Cotten M.

Virus Evol. 2016 Jun 22;2(1):vew016. doi: 10.1093/ve/vew016. eCollection 2016 Jan.

49.

Taming the BEAST-A Community Teaching Material Resource for BEAST 2.

Barido-Sottani J, Bošková V, Plessis LD, Kühnert D, Magnus C, Mitov V, Müller NF, PecErska J, Rasmussen DA, Zhang C, Drummond AJ, Heath TA, Pybus OG, Vaughan TG, Stadler T.

Syst Biol. 2018 Jan 1;67(1):170-174. doi: 10.1093/sysbio/syx060.

50.

Using Viral Gene Sequences to Compare and Explain the Heterogeneous Spatial Dynamics of Virus Epidemics.

Dellicour S, Rose R, Faria NR, Vieira LFP, Bourhy H, Gilbert M, Lemey P, Pybus OG.

Mol Biol Evol. 2017 Oct 1;34(10):2563-2571. doi: 10.1093/molbev/msx176.

PMID:
28651357

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