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Items: 35

1.

An experimental assay of the interactions of amino acids from orthologous sequences shaping a complex fitness landscape.

Pokusaeva VO, Usmanova DR, Putintseva EV, Espinar L, Sarkisyan KS, Mishin AS, Bogatyreva NS, Ivankov DN, Akopyan AV, Avvakumov SY, Povolotskaya IS, Filion GJ, Carey LB, Kondrashov FA.

PLoS Genet. 2019 Apr 10;15(4):e1008079. doi: 10.1371/journal.pgen.1008079. eCollection 2019 Apr.

2.

Chance and pleiotropy dominate genetic diversity in complex bacterial environments.

Noda-García L, Davidi D, Korenblum E, Elazar A, Putintseva E, Aharoni A, Tawfik DS.

Nat Microbiol. 2019 Jul;4(7):1221-1230. doi: 10.1038/s41564-019-0412-y. Epub 2019 Apr 1.

PMID:
30936490
3.

Comparative analysis of murine T-cell receptor repertoires.

Izraelson M, Nakonechnaya TO, Moltedo B, Egorov ES, Kasatskaya SA, Putintseva EV, Mamedov IZ, Staroverov DB, Shemiakina II, Zakharova MY, Davydov AN, Bolotin DA, Shugay M, Chudakov DM, Rudensky AY, Britanova OV.

Immunology. 2018 Feb;153(2):133-144. doi: 10.1111/imm.12857. Epub 2017 Nov 27. Review.

4.

Antigen receptor repertoire profiling from RNA-seq data.

Bolotin DA, Poslavsky S, Davydov AN, Frenkel FE, Fanchi L, Zolotareva OI, Hemmers S, Putintseva EV, Obraztsova AS, Shugay M, Ataullakhanov RI, Rudensky AY, Schumacher TN, Chudakov DM.

Nat Biotechnol. 2017 Oct 11;35(10):908-911. doi: 10.1038/nbt.3979. No abstract available.

5.

Corrigendum: Stability and function of regulatory T cells expressing the transcription factor T-bet.

Levine AG, Mendoza A, Hemmers S, Moltedo B, Niec RE, Schizas M, Hoyos BE, Putintseva EV, Chaudhry A, Dikiy S, Fujisawa S, Chudakov DM, Treuting PM, Rudensky AY.

Nature. 2017 Sep 20;550(7674):142. doi: 10.1038/nature24013.

PMID:
28953866
6.

Insertion of the voltage-sensitive domain into circularly permuted red fluorescent protein as a design for genetically encoded voltage sensor.

Kost LA, Nikitin ES, Ivanova VO, Sung U, Putintseva EV, Chudakov DM, Balaban PM, Lukyanov KA, Bogdanov AM.

PLoS One. 2017 Sep 1;12(9):e0184225. doi: 10.1371/journal.pone.0184225. eCollection 2017.

7.

Stability and function of regulatory T cells expressing the transcription factor T-bet.

Levine AG, Mendoza A, Hemmers S, Moltedo B, Niec RE, Schizas M, Hoyos BE, Putintseva EV, Chaudhry A, Dikiy S, Fujisawa S, Chudakov DM, Treuting PM, Rudensky AY.

Nature. 2017 Jun 15;546(7658):421-425. doi: 10.1038/nature22360. Epub 2017 Jun 7. Erratum in: Nature. 2017 Sep 20;:.

8.

Regulatory T Cells Exhibit Distinct Features in Human Breast Cancer.

Plitas G, Konopacki C, Wu K, Bos PD, Morrow M, Putintseva EV, Chudakov DM, Rudensky AY.

Immunity. 2016 Nov 15;45(5):1122-1134. doi: 10.1016/j.immuni.2016.10.032.

9.

VDJviz: a versatile browser for immunogenomics data.

Bagaev DV, Zvyagin IV, Putintseva EV, Izraelson M, Britanova OV, Chudakov DM, Shugay M.

BMC Genomics. 2016 Jun 13;17:453. doi: 10.1186/s12864-016-2799-7.

10.

Local fitness landscape of the green fluorescent protein.

Sarkisyan KS, Bolotin DA, Meer MV, Usmanova DR, Mishin AS, Sharonov GV, Ivankov DN, Bozhanova NG, Baranov MS, Soylemez O, Bogatyreva NS, Vlasov PK, Egorov ES, Logacheva MD, Kondrashov AS, Chudakov DM, Putintseva EV, Mamedov IZ, Tawfik DS, Lukyanov KA, Kondrashov FA.

Nature. 2016 May 19;533(7603):397-401. doi: 10.1038/nature17995. Epub 2016 May 11.

11.

Dynamics of Individual T Cell Repertoires: From Cord Blood to Centenarians.

Britanova OV, Shugay M, Merzlyak EM, Staroverov DB, Putintseva EV, Turchaninova MA, Mamedov IZ, Pogorelyy MV, Bolotin DA, Izraelson M, Davydov AN, Egorov ES, Kasatskaya SA, Rebrikov DV, Lukyanov S, Chudakov DM.

J Immunol. 2016 Jun 15;196(12):5005-13. doi: 10.4049/jimmunol.1600005. Epub 2016 May 13.

12.

VDJtools: Unifying Post-analysis of T Cell Receptor Repertoires.

Shugay M, Bagaev DV, Turchaninova MA, Bolotin DA, Britanova OV, Putintseva EV, Pogorelyy MV, Nazarov VI, Zvyagin IV, Kirgizova VI, Kirgizov KI, Skorobogatova EV, Chudakov DM.

PLoS Comput Biol. 2015 Nov 25;11(11):e1004503. doi: 10.1371/journal.pcbi.1004503. eCollection 2015 Nov.

13.

A mechanism for expansion of regulatory T-cell repertoire and its role in self-tolerance.

Feng Y, van der Veeken J, Shugay M, Putintseva EV, Osmanbeyoglu HU, Dikiy S, Hoyos BE, Moltedo B, Hemmers S, Treuting P, Leslie CS, Chudakov DM, Rudensky AY.

Nature. 2015 Dec 3;528(7580):132-136. doi: 10.1038/nature16141. Epub 2015 Nov 25.

14.

TCR usage, gene expression and function of two distinct FOXP3(+)Treg subsets within CD4(+)CD25(hi) T cells identified by expression of CD39 and CD45RO.

Ye L, Goodall JC, Zhang L, Putintseva EV, Lam B, Jiang L, Liu W, Yin J, Lin L, Li T, Wu X, Yeo G, Shugay M, Chudakov DM, Gaston H, Xu H.

Immunol Cell Biol. 2016 Mar;94(3):293-305. doi: 10.1038/icb.2015.90. Epub 2015 Oct 15.

PMID:
26467610
15.

MiXCR: software for comprehensive adaptive immunity profiling.

Bolotin DA, Poslavsky S, Mitrophanov I, Shugay M, Mamedov IZ, Putintseva EV, Chudakov DM.

Nat Methods. 2015 May;12(5):380-1. doi: 10.1038/nmeth.3364. No abstract available.

PMID:
25924071
16.

Towards error-free profiling of immune repertoires.

Shugay M, Britanova OV, Merzlyak EM, Turchaninova MA, Mamedov IZ, Tuganbaev TR, Bolotin DA, Staroverov DB, Putintseva EV, Plevova K, Linnemann C, Shagin D, Pospisilova S, Lukyanov S, Schumacher TN, Chudakov DM.

Nat Methods. 2014 Jun;11(6):653-5. doi: 10.1038/nmeth.2960. Epub 2014 May 4.

PMID:
24793455
17.

Age-related decrease in TCR repertoire diversity measured with deep and normalized sequence profiling.

Britanova OV, Putintseva EV, Shugay M, Merzlyak EM, Turchaninova MA, Staroverov DB, Bolotin DA, Lukyanov S, Bogdanova EA, Mamedov IZ, Lebedev YB, Chudakov DM.

J Immunol. 2014 Mar 15;192(6):2689-98. doi: 10.4049/jimmunol.1302064. Epub 2014 Feb 7.

18.

Huge Overlap of Individual TCR Beta Repertoires.

Shugay M, Bolotin DA, Putintseva EV, Pogorelyy MV, Mamedov IZ, Chudakov DM.

Front Immunol. 2013 Dec 25;4:466. doi: 10.3389/fimmu.2013.00466. eCollection 2013. No abstract available.

19.

Mother and child T cell receptor repertoires: deep profiling study.

Putintseva EV, Britanova OV, Staroverov DB, Merzlyak EM, Turchaninova MA, Shugay M, Bolotin DA, Pogorelyy MV, Mamedov IZ, Bobrynina V, Maschan M, Lebedev YB, Chudakov DM.

Front Immunol. 2013 Dec 25;4:463. doi: 10.3389/fimmu.2013.00463. eCollection 2013.

20.

Preparing unbiased T-cell receptor and antibody cDNA libraries for the deep next generation sequencing profiling.

Mamedov IZ, Britanova OV, Zvyagin IV, Turchaninova MA, Bolotin DA, Putintseva EV, Lebedev YB, Chudakov DM.

Front Immunol. 2013 Dec 23;4:456. doi: 10.3389/fimmu.2013.00456. eCollection 2013.

21.

MiTCR: software for T-cell receptor sequencing data analysis.

Bolotin DA, Shugay M, Mamedov IZ, Putintseva EV, Turchaninova MA, Zvyagin IV, Britanova OV, Chudakov DM.

Nat Methods. 2013 Sep;10(9):813-4. doi: 10.1038/nmeth.2555. Epub 2013 Jul 28. No abstract available.

PMID:
23892897
22.

Pairing of T-cell receptor chains via emulsion PCR.

Turchaninova MA, Britanova OV, Bolotin DA, Shugay M, Putintseva EV, Staroverov DB, Sharonov G, Shcherbo D, Zvyagin IV, Mamedov IZ, Linnemann C, Schumacher TN, Chudakov DM.

Eur J Immunol. 2013 Sep;43(9):2507-15. doi: 10.1002/eji.201343453. Epub 2013 Jun 26.

23.

A monomeric red fluorescent protein with low cytotoxicity.

Shemiakina II, Ermakova GV, Cranfill PJ, Baird MA, Evans RA, Souslova EA, Staroverov DB, Gorokhovatsky AY, Putintseva EV, Gorodnicheva TV, Chepurnykh TV, Strukova L, Lukyanov S, Zaraisky AG, Davidson MW, Chudakov DM, Shcherbo D.

Nat Commun. 2012;3:1204. doi: 10.1038/ncomms2208.

PMID:
23149748
24.

First autologous hematopoietic SCT for ankylosing spondylitis: a case report and clues to understanding the therapy.

Britanova OV, Bochkova AG, Staroverov DB, Fedorenko DA, Bolotin DA, Mamedov IZ, Turchaninova MA, Putintseva EV, Kotlobay AA, Lukyanov S, Novik AA, Lebedev YB, Chudakov DM.

Bone Marrow Transplant. 2012 Nov;47(11):1479-81. doi: 10.1038/bmt.2012.44. Epub 2012 Mar 12. No abstract available.

PMID:
22410749
25.

[Polymorphism of trinucleotide CAG-repeats of the first exon of the androgen receptor gene in the Tomsk population].

Evdokimova VN, Putintseva EA, Nazarenko SA.

Genetika. 2000 Jun;36(6):859-62. Russian.

PMID:
10923272
26.

[The estimation of the susceptibility of territories and the measures for preventing the possibility of the spread of parasitoses in migrant concentration centers in Volgograd and Tver' provinces].

Iulin NN, Korgov NN, Putintseva EV, Esaulenko OV, Startseva MV, Zavoĭkin VD, Ganushkina LA, Zelia OP, Artem'ev MM, Baranova AM, Rabinovich SA, Suleĭmanov GD, Prodeus TV, Artamoshin AS.

Med Parazitol (Mosk). 1998 Jul-Sep;(3):38-41. Russian. No abstract available.

PMID:
9792005
27.

[Dirofilariasis in the countries of the CIS: an analysis of the cases over the years 1915-1996].

Avdiukhina TI, Supriaga VG, Postnova VF, Kuimova RT, Mironova NI, Murashov NE, Putintseva EV.

Med Parazitol (Mosk). 1997 Oct-Dec;(4):3-7. Russian.

PMID:
9445993
28.

[Inhibitory factors in hematopoiesis: present and future].

Putintseva E.

Sangre (Barc). 1996 Dec;41(6):459-63. Review. Spanish. No abstract available.

PMID:
9148423
29.

[Cases of quartan malaria in Rostov and Volgograd provinces].

Artamonova AA, Verkholomova SIa, Putintseva EV, Shabar'kova ZP.

Med Parazitol (Mosk). 1993 May-Jun;(3):8-9. Russian.

PMID:
8041325
30.

Thrombopoietin-like factor in urinary extracts of a patient with prostatic adenocarcinoma.

Putintseva EG, García-Triana Y.

Haemostasis. 1989;19(3):185-7. No abstract available.

31.

Alterations in thrombopoiesis in patients with thrombocytopenia produced by dengue hemorrhagic fever.

Putintseva E, Vega G, Fernández L.

Nouv Rev Fr Hematol. 1986;28(5):269-73.

PMID:
3808936
32.

Transient remission of chronic thrombocytopenic purpura induced by dengue virus infection.

Putintseva E.

Acta Haematol. 1985;73(4):241-3. No abstract available.

33.

[Night/day plasma iron metabolism studies in patients with polycythaemia vera (author's transl)].

Triana YG, Putintseva E, Hernández P, Callejas J, Alvarez ME.

Sangre (Barc). 1981;26(6):1091-6. Spanish. No abstract available.

PMID:
7200640
34.

[Effect of chronic hypoxia on thrombocytopoiesis in mice].

Putintseva EG, García Triana Y.

Patol Fiziol Eksp Ter. 1980;(4):36-40. Russian. No abstract available.

PMID:
7413266
35.

[Modification of a biological method of determining thrombocytopoietin].

Putintseva EG.

Patol Fiziol Eksp Ter. 1979 Nov-Dec;(6):66-8. Russian. No abstract available.

PMID:
542338

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