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Items: 1 to 50 of 154

1.

New factors for protein transport identified by a genome-wide CRISPRi screen in mammalian cells.

Bassaganyas L, Popa SJ, Horlbeck M, Puri C, Stewart SE, Campelo F, Ashok A, Butnaru CM, Brouwers N, Heydari K, Ripoche J, Weissman J, Rubinsztein DC, Schekman R, Malhotra V, Moreau K, Villeneuve J.

J Cell Biol. 2019 Nov 4;218(11):3861-3879. doi: 10.1083/jcb.201902028. Epub 2019 Sep 5.

2.

LC3-positive structures are prominent in autophagy-deficient cells.

Runwal G, Stamatakou E, Siddiqi FH, Puri C, Zhu Y, Rubinsztein DC.

Sci Rep. 2019 Jul 12;9(1):10147. doi: 10.1038/s41598-019-46657-z.

3.

Coincidence detection of RAB11A and PI(3)P by WIPI2 directs autophagosome formation.

Vicinanza M, Puri C, Rubinsztein DC.

Oncotarget. 2019 Apr 5;10(27):2579-2580. doi: 10.18632/oncotarget.26829. eCollection 2019 Apr 5. No abstract available.

4.

Detection of atrial fibrillation and other abnormal rhythms from ECG using a multi-layer classifier architecture.

Mukherjee A, Dutta Choudhury A, Datta S, Puri C, Banerjee R, Singh R, Ukil A, Bandyopadhyay S, Pal A, Khandelwal S.

Physiol Meas. 2019 Jun 4;40(5):054006. doi: 10.1088/1361-6579/aaff04.

PMID:
30650387
5.

Pattern Analysis in Physiological Pulsatile Signals: An Aid to Personalized Healthcare.

Bandyopadhyay S, Ukil A, Puri C, Singh R, Pal A, Murthy CA.

Conf Proc IEEE Eng Med Biol Soc. 2018 Jul;2018:482-485. doi: 10.1109/EMBC.2018.8512293.

PMID:
30440439
6.

Phagophores evolve from recycling endosomes.

Puri C, Vicinanza M, Rubinsztein DC.

Autophagy. 2018;14(8):1475-1477. doi: 10.1080/15548627.2018.1482148. Epub 2018 Jul 23.

7.

The RAB11A-Positive Compartment Is a Primary Platform for Autophagosome Assembly Mediated by WIPI2 Recognition of PI3P-RAB11A.

Puri C, Vicinanza M, Ashkenazi A, Gratian MJ, Zhang Q, Bento CF, Renna M, Menzies FM, Rubinsztein DC.

Dev Cell. 2018 Apr 9;45(1):114-131.e8. doi: 10.1016/j.devcel.2018.03.008.

8.

Analysis of phonocardiogram signals through proactive denoising using novel self-discriminant learner.

Puri C, Singh R, Bandyopadhyay S, Ukil A, Mukherjee A.

Conf Proc IEEE Eng Med Biol Soc. 2017 Jul;2017:2753-2756. doi: 10.1109/EMBC.2017.8037427.

PMID:
29060468
9.

Simplified approach for in-vitro production and purification of cell derived Cancer Antigen 15-3.

Haidar S, Bhanushali PB, Shukla KK, Modi D, Puri CP, Badgujar SB, Chugh M.

Int J Biol Macromol. 2018 Feb;107(Pt B):1456-1462. doi: 10.1016/j.ijbiomac.2017.10.012. Epub 2017 Oct 7.

PMID:
29017885
10.

Autophagy and Neurodegeneration: Pathogenic Mechanisms and Therapeutic Opportunities.

Menzies FM, Fleming A, Caricasole A, Bento CF, Andrews SP, Ashkenazi A, F├╝llgrabe J, Jackson A, Jimenez Sanchez M, Karabiyik C, Licitra F, Lopez Ramirez A, Pavel M, Puri C, Renna M, Ricketts T, Schlotawa L, Vicinanza M, Won H, Zhu Y, Skidmore J, Rubinsztein DC.

Neuron. 2017 Mar 8;93(5):1015-1034. doi: 10.1016/j.neuron.2017.01.022. Review.

11.

An unsupervised learning for robust cardiac feature derivation from PPG signals.

Bandyopadhyay S, Ukil A, Puri C, Singh R, Pal A, Mandana KM, Murthy CA.

Conf Proc IEEE Eng Med Biol Soc. 2016 Aug;2016:740-743. doi: 10.1109/EMBC.2016.7590808.

PMID:
28268434
12.

Development of an indirect immunofluorescence based assay for diagnosis of ulcerative colitis in Indian population.

Rodrigues AV, Puri CP, Bhanushali PB, Shukla KK, Roychoudhury S, Badgujar SB.

Immunol Lett. 2017 Jan;181:20-25. doi: 10.1016/j.imlet.2016.11.008. Epub 2016 Nov 11.

PMID:
27845152
13.

Mammalian Autophagy: How Does It Work?

Bento CF, Renna M, Ghislat G, Puri C, Ashkenazi A, Vicinanza M, Menzies FM, Rubinsztein DC.

Annu Rev Biochem. 2016 Jun 2;85:685-713. doi: 10.1146/annurev-biochem-060815-014556. Epub 2016 Feb 8. Review.

PMID:
26865532
14.

Development of glycan specific lectin based immunoassay for detection of prostate specific antigen.

Bhanushali PB, Badgujar SB, Tripathi MM, Gupta S, Murthy V, Krishnasastry MV, Puri CP.

Int J Biol Macromol. 2016 May;86:468-80. doi: 10.1016/j.ijbiomac.2016.01.110. Epub 2016 Feb 1.

PMID:
26840176
15.

Transcriptional regulation of Annexin A2 promotes starvation-induced autophagy.

Moreau K, Ghislat G, Hochfeld W, Renna M, Zavodszky E, Runwal G, Puri C, Lee S, Siddiqi F, Menzies FM, Ravikumar B, Rubinsztein DC.

Nat Commun. 2015 Aug 20;6:8045. doi: 10.1038/ncomms9045.

16.

Proliferation and decidualization of endometrial stromal cells during embryo-attachment stage in bonnet monkeys (Macaca radiata).

Nimbkar-Joshi S, Katkam RR, Kakar R, Singh P, Chaudhari UK, Manjramkar DD, Metkari SM, Kholkute SD, Puri CP, Sachdeva G.

Cell Tissue Res. 2015 Aug;361(2):605-17. doi: 10.1007/s00441-015-2117-8. Epub 2015 Feb 14.

PMID:
25681278
17.

PI(5)P regulates autophagosome biogenesis.

Vicinanza M, Korolchuk VI, Ashkenazi A, Puri C, Menzies FM, Clarke JH, Rubinsztein DC.

Mol Cell. 2015 Jan 22;57(2):219-34. doi: 10.1016/j.molcel.2014.12.007. Epub 2015 Jan 8.

18.

Methods to analyze SNARE-dependent vesicular fusion events that regulate autophagosome biogenesis.

Moreau K, Puri C, Rubinsztein DC.

Methods. 2015 Mar;75:19-24. doi: 10.1016/j.ymeth.2014.11.005. Epub 2014 Nov 13.

19.

PICALM modulates autophagy activity and tau accumulation.

Moreau K, Fleming A, Imarisio S, Lopez Ramirez A, Mercer JL, Jimenez-Sanchez M, Bento CF, Puri C, Zavodszky E, Siddiqi F, Lavau CP, Betton M, O'Kane CJ, Wechsler DS, Rubinsztein DC.

Nat Commun. 2014 Sep 22;5:4998. doi: 10.1038/ncomms5998.

20.

Effect of fly ash application on soil microbial response and heavy metal accumulation in soil and rice plant.

Nayak AK, Raja R, Rao KS, Shukla AK, Mohanty S, Shahid M, Tripathi R, Panda BB, Bhattacharyya P, Kumar A, Lal B, Sethi SK, Puri C, Nayak D, Swain CK.

Ecotoxicol Environ Saf. 2015 Apr;114:257-62. doi: 10.1016/j.ecoenv.2014.03.033. Epub 2014 May 14.

PMID:
24836933
21.

Teaching an Old Log New Tricks with Machine Learning.

Schnell K, Puri C, Mahler P, Dukatz C.

Big Data. 2014 Mar;2(1):7-11. doi: 10.1089/big.2014.1518.

PMID:
27447306
22.

ATG16L1 meets ATG9 in recycling endosomes: additional roles for the plasma membrane and endocytosis in autophagosome biogenesis.

Puri C, Renna M, Bento CF, Moreau K, Rubinsztein DC.

Autophagy. 2014 Jan;10(1):182-4. doi: 10.4161/auto.27174. Epub 2013 Nov 19.

23.

Diverse autophagosome membrane sources coalesce in recycling endosomes.

Puri C, Renna M, Bento CF, Moreau K, Rubinsztein DC.

Cell. 2013 Sep 12;154(6):1285-99. doi: 10.1016/j.cell.2013.08.044.

24.

IGF-1 receptor antagonism inhibits autophagy.

Renna M, Bento CF, Fleming A, Menzies FM, Siddiqi FH, Ravikumar B, Puri C, Garcia-Arencibia M, Sadiq O, Corrochano S, Carter S, Brown SD, Acevedo-Arozena A, Rubinsztein DC.

Hum Mol Genet. 2013 Nov 15;22(22):4528-44. doi: 10.1093/hmg/ddt300. Epub 2013 Jun 25.

25.

The dynamics of engineered resident proteins in the mammalian Golgi complex relies on cisternal maturation.

Rizzo R, Parashuraman S, Mirabelli P, Puri C, Lucocq J, Luini A.

J Cell Biol. 2013 Jun 24;201(7):1027-36. doi: 10.1083/jcb.201211147. Epub 2013 Jun 17.

26.

The role of membrane-trafficking small GTPases in the regulation of autophagy.

Bento CF, Puri C, Moreau K, Rubinsztein DC.

J Cell Sci. 2013 Mar 1;126(Pt 5):1059-69. doi: 10.1242/jcs.123075.

27.

Bim inhibits autophagy by recruiting Beclin 1 to microtubules.

Luo S, Garcia-Arencibia M, Zhao R, Puri C, Toh PP, Sadiq O, Rubinsztein DC.

Mol Cell. 2012 Aug 10;47(3):359-70. doi: 10.1016/j.molcel.2012.05.040. Epub 2012 Jun 27.

28.

Endometrial epithelial cell modifications in response to embryonic signals in bonnet monkeys (Macaca radiata).

Nimbkar-Joshi S, Katkam RR, Chaudhari UK, Jacob S, Manjramkar DD, Metkari SM, Hinduja I, Mangoli V, Desai S, Kholkute SD, Puri CP, Sachdeva G.

Histochem Cell Biol. 2012 Aug;138(2):289-304. doi: 10.1007/s00418-012-0951-2. Epub 2012 Apr 24.

PMID:
22527696
29.

Measurement of autophagic activity in mammalian cells.

Menzies FM, Moreau K, Puri C, Renna M, Rubinsztein DC.

Curr Protoc Cell Biol. 2012 Mar;Chapter 15:Unit 15.16. doi: 10.1002/0471143030.cb1516s54.

PMID:
22422474
30.

Arf6 promotes autophagosome formation via effects on phosphatidylinositol 4,5-bisphosphate and phospholipase D.

Moreau K, Ravikumar B, Puri C, Rubinsztein DC.

J Cell Biol. 2012 Feb 20;196(4):483-96. doi: 10.1083/jcb.201110114.

31.

Synthesis, preliminary biological evaluation and molecular modeling of some new heterocyclic inhibitors of TACE.

Sengupta P, Puri CS, Chokshi HA, Sheth CK, Midha AS, Chitturi TR, Thennati R, Murumkar PR, Yadav MR.

Eur J Med Chem. 2011 Nov;46(11):5549-55. doi: 10.1016/j.ejmech.2011.09.018. Epub 2011 Sep 21.

PMID:
21963348
32.

Transcriptional activation of lysosomal exocytosis promotes cellular clearance.

Medina DL, Fraldi A, Bouche V, Annunziata F, Mansueto G, Spampanato C, Puri C, Pignata A, Martina JA, Sardiello M, Palmieri M, Polishchuk R, Puertollano R, Ballabio A.

Dev Cell. 2011 Sep 13;21(3):421-30. doi: 10.1016/j.devcel.2011.07.016. Epub 2011 Sep 1.

33.

Autophagosome precursor maturation requires homotypic fusion.

Moreau K, Ravikumar B, Renna M, Puri C, Rubinsztein DC.

Cell. 2011 Jul 22;146(2):303-17. doi: 10.1016/j.cell.2011.06.023.

34.

Modeling colon adenocarcinomas in vitro a 3D co-culture system induces cancer-relevant pathways upon tumor cell and stromal fibroblast interaction.

Dolznig H, Rupp C, Puri C, Haslinger C, Schweifer N, Wieser E, Kerjaschki D, Garin-Chesa P.

Am J Pathol. 2011 Jul;179(1):487-501. doi: 10.1016/j.ajpath.2011.03.015. Epub 2011 Apr 30.

35.

Interleukin 28B Polymorphisms and Hepatitis C-Translating the Association into Clinical Decision Making.

Puri CP.

J Clin Exp Hepatol. 2011 Jun;1(1):27-33. doi: 10.1016/S0973-6883(11)60115-1. Epub 2011 Aug 26.

36.
37.

Plasma membrane contributes to the formation of pre-autophagosomal structures.

Ravikumar B, Moreau K, Jahreiss L, Puri C, Rubinsztein DC.

Nat Cell Biol. 2010 Aug;12(8):747-57. doi: 10.1038/ncb2078. Epub 2010 Jul 18. Erratum in: Nat Cell Biol. 2010 Oct;12(10):1021.

38.

Embryo-induced alterations in the molecular phenotype of primate endometrium.

Nimbkar-Joshi S, Rosario G, Katkam RR, Manjramkar DD, Metkari SM, Puri CP, Sachdeva G.

J Reprod Immunol. 2009 Dec;83(1-2):65-71. doi: 10.1016/j.jri.2009.08.011. Epub 2009 Oct 31. Review.

PMID:
19880195
39.

Overexpression of myosin VI in prostate cancer cells enhances PSA and VEGF secretion, but has no effect on endocytosis.

Puri C, Chibalina MV, Arden SD, Kruppa AJ, Kendrick-Jones J, Buss F.

Oncogene. 2010 Jan 14;29(2):188-200. doi: 10.1038/onc.2009.328. Epub 2009 Oct 26.

40.
41.

Potential roles of myosin VI in cell motility.

Chibalina MV, Puri C, Kendrick-Jones J, Buss F.

Biochem Soc Trans. 2009 Oct;37(Pt 5):966-70. doi: 10.1042/BST0370966. Review.

42.

Expression of endometrial protein kinase a during early pregnancy in bonnet monkeys (Macaca radiata).

Rosario GX, Katkam RR, Nimbkar-Joshi S, Modi DN, Manjramkar DD, Hinduja I, Zaveri K, Puri CP, Sachdeva G.

Biol Reprod. 2009 Dec;81(6):1172-81. doi: 10.1095/biolreprod.109.077339. Epub 2009 Aug 14.

PMID:
19684337
43.

Lipid rafts and clathrin cooperate in the internalization of PrP in epithelial FRT cells.

Sarnataro D, Caputo A, Casanova P, Puri C, Paladino S, Tivodar SS, Campana V, Tacchetti C, Zurzolo C.

PLoS One. 2009 Jun 8;4(6):e5829. doi: 10.1371/journal.pone.0005829.

44.

Differential expression of calreticulin, a reticuloplasmin in primate endometrium.

Parmar T, Nimbkar-Joshi S, Katkam RR, Gadkar-Sable S, Chaudhari U, Manjramkar DD, Savardekar L, Jacob S, Puri CP, Sachdeva G.

Hum Reprod. 2009 Sep;24(9):2205-16. doi: 10.1093/humrep/dep187. Epub 2009 May 21.

PMID:
19460863
45.

Protein profiling of human endometrial tissues in the midsecretory and proliferative phases of the menstrual cycle.

Parmar T, Gadkar-Sable S, Savardekar L, Katkam R, Dharma S, Meherji P, Puri CP, Sachdeva G.

Fertil Steril. 2009 Sep;92(3):1091-103. doi: 10.1016/j.fertnstert.2008.07.1734. Epub 2008 Sep 14.

PMID:
18793766
46.

Derivation and characterization of two genetically unique human embryonic stem cell lines on in-house-derived human feeders.

Kumar N, Hinduja I, Nagvenkar P, Pillai L, Zaveri K, Mukadam L, Telang J, Desai S, Mangoli V, Mangoli R, Padgaonkar S, Kaur G, Puri C, Bhartiya D.

Stem Cells Dev. 2009 Apr;18(3):435-45. doi: 10.1089/scd.2008.0234.

PMID:
18699724
47.

Effective immunoconjugate therapy in cancer models targeting a serine protease of tumor fibroblasts.

Ostermann E, Garin-Chesa P, Heider KH, Kalat M, Lamche H, Puri C, Kerjaschki D, Rettig WJ, Adolf GR.

Clin Cancer Res. 2008 Jul 15;14(14):4584-92. doi: 10.1158/1078-0432.CCR-07-5211.

48.

Endometrial modifications during early pregnancy in bonnet monkeys (Macaca radiata).

Rosario GX, D'Souza SJ, Manjramkar DD, Parmar V, Puri CP, Sachdeva G.

Reprod Fertil Dev. 2008;20(2):281-94.

PMID:
18255018
49.

hGPR87 contributes to viability of human tumor cells.

Glatt S, Halbauer D, Heindl S, Wernitznig A, Kozina D, Su KC, Puri C, Garin-Chesa P, Sommergruber W.

Int J Cancer. 2008 May 1;122(9):2008-16. doi: 10.1002/ijc.23349.

50.

Protein repertoire of human uterine fluid during the mid-secretory phase of the menstrual cycle.

Parmar T, Sachdeva G, Savardekar L, Katkam RR, Nimbkar-Joshi S, Gadkar-Sable S, Salvi V, Manjramkar DD, Meherji P, Puri CP.

Hum Reprod. 2008 Feb;23(2):379-86. Epub 2007 Nov 22.

PMID:
18033938

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