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Items: 42

1.

Whole-Genome Sequencing of Aspergillus terreus Species Complex.

Palanivel M, Mac Aogáin M, Purbojati RW, Uchida A, Aung NW, Lim SBY, Putra A, Drautz-Moses DI, Seaton S, Rogers TR, Schuster SC, Chotirmall SH.

Mycopathologia. 2020 Feb 27. doi: 10.1007/s11046-020-00433-0. [Epub ahead of print]

PMID:
32108289
2.

Whole-Genome Sequence of Bacillus megaterium Strain SGAir0080, Isolated from an Indoor Air Sample.

Kalsi N, Uchida A, Purbojati RW, Houghton JNI, Chénard C, Wong A, Clare ME, Kushwaha KK, Putra A, Gaultier NE, Premkrishnan BNV, Heinle CE, Vettath VK, Drautz-Moses DI, Junqueira ACM, Schuster SC.

Microbiol Resour Announc. 2019 Dec 12;8(50). pii: e01249-19. doi: 10.1128/MRA.01249-19.

3.

Complete Genome Sequence of Curtobacterium sp. Strain SGAir0471, Isolated from Singapore Air Samples.

Hlaing PPT, Junqueira ACM, Uchida A, Purbojati RW, Wong A, Kushwaha KK, Putra A, Kee C, Gaultier NE, Premkrishnan BNV, Heinle CE, Lim SBY, Vettath VK, Drautz-Moses DI, Schuster SC.

Microbiol Resour Announc. 2019 Nov 21;8(47). pii: e00960-19. doi: 10.1128/MRA.00960-19.

4.

Neurogenesis and prolongevity signaling in young germ-free mice transplanted with the gut microbiota of old mice.

Kundu P, Lee HU, Garcia-Perez I, Tay EXY, Kim H, Faylon LE, Martin KA, Purbojati R, Drautz-Moses DI, Ghosh S, Nicholson JK, Schuster S, Holmes E, Pettersson S.

Sci Transl Med. 2019 Nov 13;11(518). pii: eaau4760. doi: 10.1126/scitranslmed.aau4760.

PMID:
31723038
5.

Microbial communities in the tropical air ecosystem follow a precise diel cycle.

Gusareva ES, Acerbi E, Lau KJX, Luhung I, Premkrishnan BNV, Kolundžija S, Purbojati RW, Wong A, Houghton JNI, Miller D, Gaultier NE, Heinle CE, Clare ME, Vettath VK, Kee C, Lim SBY, Chénard C, Phung WJ, Kushwaha KK, Nee AP, Putra A, Panicker D, Yanqing K, Hwee YZ, Lohar SR, Kuwata M, Kim HL, Yang L, Uchida A, Drautz-Moses DI, Junqueira ACM, Schuster SC.

Proc Natl Acad Sci U S A. 2019 Nov 12;116(46):23299-23308. doi: 10.1073/pnas.1908493116. Epub 2019 Oct 28.

6.

Complete Genome Sequence of Micrococcus luteus Strain SGAir0127, Isolated from Indoor Air Samples from Singapore.

Kutmutia SK, Drautz-Moses DI, Uchida A, Purbojati RW, Wong A, Kushwaha KK, Putra A, Premkrishnan BNV, Heinle CE, Vettath VK, Junqueira ACM, Schuster SC.

Microbiol Resour Announc. 2019 Oct 10;8(41). pii: e00646-19. doi: 10.1128/MRA.00646-19.

7.

Complete Genome Sequence of Rhodococcus sp. Strain SGAir0479, Isolated from Indoor Air Collected in Singapore.

Oliveira EL, Drautz-Moses DI, Uchida A, Purbojati RW, Wong A, Kushwaha KK, Putra A, Aung NW, Premkrishnan BNV, Heinle CE, Vettath VK, Junqueira ACM, Schuster SC.

Microbiol Resour Announc. 2019 Oct 3;8(40). pii: e00622-19. doi: 10.1128/MRA.00622-19.

8.

Complete Genome Sequence of Lysinibacillus sp. Strain SGAir0095, Isolated from Tropical Air Samples Collected in Singapore.

Wong A, Junqueira ACM, Uchida A, Purbojati RW, Houghton JNI, Chénard C, Clare ME, Kushwaha KK, Putra A, Gaultier NE, Premkrishnan BNV, Vettath VK, Heinle CE, Drautz-Moses DI, Schuster SC.

Microbiol Resour Announc. 2019 Sep 19;8(38). pii: e00604-19. doi: 10.1128/MRA.00604-19.

9.

Genome Sequence of the Tropical Atmosphere Bacterium Pontibacter sp. Strain SGAir0037.

Lim SBY, Junqueira ACM, Uchida A, Purbojati RW, Houghton JNI, Luhung I, Chénard C, Wong A, Kolundžija S, Clare ME, Kushwaha KK, Putra A, Gaultier NE, Premkrishnan BNV, Heinle CE, Vettath VK, Drautz-Moses DI, Schuster SC.

Microbiol Resour Announc. 2019 Sep 12;8(37). pii: e00610-19. doi: 10.1128/MRA.00610-19.

10.

Complete Genome Sequence of Citricoccus sp. Strain SGAir0253, Isolated from Indoor Air in Singapore.

Chandrasekaran L, Drautz-Moses DI, Uchida A, Purbojati RW, Wong A, Kushwaha KK, Putra A, Gaultier NE, Premkrishnan BNV, Heinle CE, Vettath VK, Junqueira ACM, Schuster SC.

Microbiol Resour Announc. 2019 Sep 12;8(37). pii: e00606-19. doi: 10.1128/MRA.00606-19.

11.

Complete Genome Sequence of Streptomyces sp. Strain SGAir0924, an Actinobacterium Isolated from Outdoor Air in Singapore.

Gupta AB, Uchida A, Purbojati RW, Wong A, Kushwaha KK, Putra A, Premkrishnan BNV, Heinle CE, Eng M, Vettath VK, Junqueira ACM, Drautz-Moses DI, Schuster SC.

Microbiol Resour Announc. 2019 Aug 29;8(35). pii: e00899-19. doi: 10.1128/MRA.00899-19.

12.

Complete Genome Sequence of Pseudomonas sp. Strain SGAir0191, Isolated from Tropical Air Collected in Singapore.

Wong A, Junqueira ACM, Chaturvedi A, Uchida A, Purbojati RW, Houghton JNI, Chénard C, Clare ME, Kushwaha KK, Putra A, Gaultier NE, Premkrishnan BNV, Vettath VK, Heinle CE, Drautz-Moses DI, Schuster SC.

Microbiol Resour Announc. 2019 Aug 22;8(34). pii: e00617-19. doi: 10.1128/MRA.00617-19.

13.

Complete Genome Sequence of Microbacterium sp. Strain SGAir0570, Isolated from Tropical Air Collected in Singapore.

Kalsi N, Drautz-Moses DI, Uchida A, Purbojati RW, Houghton JNI, Chénard C, Wong A, Kolundžija S, Clare ME, Kushwaha KK, Putra A, Gaultier NE, Premkrishnan BNV, Heinle CE, Vettath VK, Junqueira ACM, Schuster SC.

Microbiol Resour Announc. 2019 Aug 22;8(34). pii: e00613-19. doi: 10.1128/MRA.00613-19.

14.

Complete Genome Sequence of Enterococcus faecalis Strain SGAir0397, Isolated from a Tropical Air Sample Collected in Singapore.

Purbojati RW, Drautz-Moses DI, Uchida A, Wong A, Clare ME, Kushwaha KK, Putra A, Premkrishnan BNV, Heinle CE, Aung NW, Vettath VK, Junqueira ACM, Schuster SC.

Microbiol Resour Announc. 2019 Aug 15;8(33). pii: e00593-19. doi: 10.1128/MRA.00593-19.

15.

Correction for Heinle et al., "Complete Genome Sequence of Lelliottia nimipressuralis Strain SGAir0187, Isolated from Tropical Air Collected in Singapore".

Heinle CE, Junqueira ACM, Uchida A, Purbojati RW, Houghton JNI, Chénard C, Drautz-Moses DI, Wong A, Kolundžija S, Clare ME, Kushwaha KK, Panicker D, Putra A, Gaultier NE, Premkrishnan BNV, Vettath VK, Schuster SC.

Microbiol Resour Announc. 2019 Aug 8;8(32). pii: e00739-19. doi: 10.1128/MRA.00739-19. No abstract available.

16.

Correction for Vettath et al., "Complete Genome Sequence of Acinetobacter indicus Strain SGAir0564 Isolated from Tropical Air Collected in Singapore".

Vettath VK, Junqueira ACM, Uchida A, Purbojati RW, Houghton JNI, Chénard C, Drautz-Moses DI, Wong A, Kolundžija S, Clare ME, Kushwaha KK, Panicker D, Putra A, Gaultier NE, Heinle CE, Premkrishnan BNV, Schuster SC.

Microbiol Resour Announc. 2019 Aug 8;8(32). pii: e00738-19. doi: 10.1128/MRA.00738-19. No abstract available.

17.

Correction for Kee et al., "Complete Genome Sequence of Pseudomonas stutzeri Strain SGAir0442, Isolated from Singapore Air Samples".

Kee C, Junqueira ACM, Uchida A, Purbojati RW, Houghton JNI, Chénard C, Wong A, Kolundžija S, Clare ME, Kushwaha KK, Panicker D, Putra A, Gaultier NE, Premkrishnan BNV, Heinle CE, Vettath VK, Drautz-Moses DI, Schuster SC.

Microbiol Resour Announc. 2019 Aug 8;8(32). pii: e00737-19. doi: 10.1128/MRA.00737-19. No abstract available.

18.

Complete Genome Sequence of Brachybacterium sp. Strain SGAir0954, Isolated from Singapore Air.

Hlaing PPT, Junqueira ACM, Uchida A, Purbojati RW, Houghton JNI, Chénard C, Wong A, Clare ME, Kushwaha KK, Putra A, Kee C, Gaultier NE, Premkrishnan BNV, Heinle CE, Lim SBY, Vettah VK, Drautz-Moses DI, Schuster SC.

Microbiol Resour Announc. 2019 Aug 8;8(32). pii: e00619-19. doi: 10.1128/MRA.00619-19.

19.

Complete Genome Sequence of Agrococcus sp. Strain SGAir0287, Isolated from Tropical Air Collected in Singapore.

Lau KJX, Junqueira ACM, Uchida A, Purbojati RW, Houghton JNI, Chénard C, Wong A, Kolundžija S, Clare ME, Kushwaha KK, Putra A, Gaultier NE, Heinle CE, Premkrishnan BNV, Vettah VK, Drautz-Moses DI, Schuster SC.

Microbiol Resour Announc. 2019 Aug 8;8(32). pii: e00616-19. doi: 10.1128/MRA.00616-19.

20.

Complete Genome Sequence of Nissabacter sp. Strain SGAir0207, Isolated from an Air Sample Collected in Singapore.

Gaultier NE, Junqueira ACM, Uchida A, Purbojati RW, Houghton JNI, Chénard C, Wong A, Kolundžija S, Clare ME, Kushwaha KK, Putra A, Kee C, Premkrishnan BNV, Heinle CE, Lim SBY, Vettath VK, Drautz-Moses DI, Schuster SC.

Microbiol Resour Announc. 2019 Aug 8;8(32). pii: e00559-19. doi: 10.1128/MRA.00559-19.

21.

Correction for Premkrishnan et al., "Complete Genome Sequence of Staphylococcus haemolyticus Strain SGAir0252".

Premkrishnan BNV, Junqueira ACM, Uchida A, Purbojati RW, Houghton JNI, Chénard C, Wong A, Kolundžija S, Clare ME, Kushwaha KK, Panicker D, Putra A, Gaultier NE, Heinle CE, Vettath VK, Drautz-Moses DI, Schuster SC.

Microbiol Resour Announc. 2019 Aug 1;8(31). pii: e00736-19. doi: 10.1128/MRA.00736-19. No abstract available.

22.

Correction for Vettath et al., "Complete Genome Sequence of Bacillus altitudinis Strain SGAir0031 Isolated from Tropical Air Collected in Singapore".

Vettath VK, Junqueira ACM, Uchida A, Purbojati RW, Houghton JNI, Chénard C, Drautz-Moses DI, Wong A, Kolundžija S, Clare ME, Lau KJX, Gaultier NE, Heinle CE, Premkrishnan BNV, Gusareva ES, Acerbi E, Yang L, Schuster SC.

Microbiol Resour Announc. 2019 Aug 1;8(31). pii: e00734-19. doi: 10.1128/MRA.00734-19. No abstract available.

23.

Complete Genome Sequence of Brevundimonas sp. Strain SGAir0440, Isolated from Indoor Air in Singapore.

Purbojati RW, Drautz-Moses DI, Uchida A, Wong A, Clare ME, Kushwaha KK, Putra A, Premkrishnan BNV, Heinle CE, Aung NW, Vettath VK, Junqueira ACM, Schuster SC.

Microbiol Resour Announc. 2019 Aug 1;8(31). pii: e00594-19. doi: 10.1128/MRA.00594-19.

24.

Persistent changes in liver methylation and microbiome composition following reversal of diet-induced non-alcoholic-fatty liver disease.

Kim H, Worsley O, Yang E, Purbojati RW, Liang AL, Tan W, Moses DID, Hartono S, Fan V, Lim TKH, Schuster SC, Foo RS, Chow PKH, Pettersson S.

Cell Mol Life Sci. 2019 Nov;76(21):4341-4354. doi: 10.1007/s00018-019-03114-4. Epub 2019 May 22.

PMID:
31119300
25.

Genome Sequence of Pantoea ananatis SGAir0210, Isolated from Outdoor Air in Singapore.

Luhung I, Junqueira ACM, Uchida A, Purbojati RW, Houghton JNI, Chénard C, Wong A, Clare ME, Kushwaha KK, Panicker D, Putra A, Gaultier NE, Premkrishnan BNV, Heinle CE, Vettath VK, Drautz-Moses DI, Schuster SC.

Genome Announc. 2018 Jul 5;6(27). pii: e00643-18. doi: 10.1128/genomeA.00643-18.

26.

Genome Sequence of Bacillus velezensis SGAir0473, Isolated from Tropical Air Collected in Singapore.

Lim SBY, Junqueira ACM, Uchida A, Purbojati RW, Houghton JNI, Chénard C, Wong A, Kolundžija S, Clare ME, Kushwaha KK, Panicker D, Putra A, Gaultier NE, Premkrishnan BNV, Heinle CE, Vettath VK, Drautz-Moses DI, Schuster SC.

Genome Announc. 2018 Jul 5;6(27). pii: e00642-18. doi: 10.1128/genomeA.00642-18.

27.

Complete Genome Sequence of the Bacterium Serratia marcescens SGAir0764, Isolated from Singapore Air.

Gaultier NE, Junqueira ACM, Uchida A, Purbojati RW, Houghton JNI, Chénard C, Wong A, Clare ME, Kushwaha KK, Panicker D, Putra A, Kee C, Premkrishnan BNV, Heinle CE, Lim SBY, Vettath VK, Drautz-Moses DI, Schuster SC.

Genome Announc. 2018 Jul 5;6(27). pii: e00637-18. doi: 10.1128/genomeA.00637-18.

28.

Genome Sequence of Geobacillus thermoleovorans SGAir0734, Isolated from Singapore Air.

Gaultier NE, Junqueira ACM, Uchida A, Purbojati RW, Houghton JNI, Chénard C, Wong A, Kolundžija S, Clare ME, Kushwaha KK, Panicker D, Putra A, Kee C, Premkrishnan BNV, Heinle CE, Lim SBY, Vettath VK, Drautz-Moses DI, Schuster SC.

Genome Announc. 2018 Jul 5;6(27). pii: e00636-18. doi: 10.1128/genomeA.00636-18.

29.

Complete Genome Sequence of Acinetobacter schindleri SGAir0122 Isolated from Singapore Air.

Kee C, Junqueira ACM, Uchida A, Purbojati RW, Houghton JNI, Chénard C, Wong A, Clare ME, Kushwaha KK, Panicker D, Putra A, Gaultier NE, Premkrishnan BNV, Heinle CE, Vettath VK, Drautz-Moses DI, Schuster SC.

Genome Announc. 2018 Jun 28;6(26). pii: e00567-18. doi: 10.1128/genomeA.00567-18.

30.

Complete Genome Sequence of Pseudomonas stutzeri Type Strain SGAir0442, Isolated from Singapore Air Samples.

Kee C, Junqueira ACM, Uchida A, Purbojati RW, Houghton JNI, Chénard C, Wong A, Kolundžija S, Clare ME, Kushwaha KK, Panicker D, Putra A, Gaultier NE, Premkrishnan BNV, Heinle CE, Vettath VK, Drautz-Moses DI, Schuster SC.

Genome Announc. 2018 May 31;6(22). pii: e00424-18. doi: 10.1128/genomeA.00424-18. Erratum in: Microbiol Resour Announc. 2019 Aug 8;8(32):.

31.

Complete Genome Sequence of Staphylococcus haemolyticus Type Strain SGAir0252.

Premkrishnan BNV, Junqueira ACM, Uchida A, Purbojati RW, Houghton JNI, Chénard C, Wong A, Kolundžija S, Clare ME, Kushwaha KK, Panicker D, Putra A, Gaultier NE, Heinle CE, Vettath VK, Drautz-Moses DI, Schuster SC.

Genome Announc. 2018 May 10;6(19). pii: e00229-18. doi: 10.1128/genomeA.00229-18. Erratum in: Microbiol Resour Announc. 2019 Aug 1;8(31):.

32.

Complete Genome Sequence of Acinetobacter indicus Type Strain SGAir0564 Isolated from Tropical Air Collected in Singapore.

Vettath VK, Junqueira ACM, Uchida A, Purbojati RW, Houghton JNI, Chénard C, Drautz-Moses DI, Wong A, Kolundžija S, Clare ME, Kushwaha KK, Panicker D, Putra A, Gaultier NE, Heinle CE, Premkrishnan BNV, Schuster SC.

Genome Announc. 2018 May 3;6(18). pii: e00230-18. doi: 10.1128/genomeA.00230-18. Erratum in: Microbiol Resour Announc. 2019 Aug 8;8(32):.

33.

Complete Genome Sequence of Lelliottia nimipressuralis Type Strain SGAir0187, Isolated from Tropical Air Collected in Singapore.

Heinle CE, Junqueira ACM, Uchida A, Purbojati RW, Houghton JNI, Chénard C, Drautz-Moses DI, Wong A, Kolundžija S, Clare ME, Kushwaha KK, Panicker D, Putra A, Gaultier NE, Premkrishnan BNV, Vettath VK, Schuster SC.

Genome Announc. 2018 May 3;6(18). pii: e00231-18. doi: 10.1128/genomeA.00231-18. Erratum in: Microbiol Resour Announc. 2019 Aug 8;8(32):.

34.

The microbiomes of blowflies and houseflies as bacterial transmission reservoirs.

Junqueira ACM, Ratan A, Acerbi E, Drautz-Moses DI, Premkrishnan BNV, Costea PI, Linz B, Purbojati RW, Paulo DF, Gaultier NE, Subramanian P, Hasan NA, Colwell RR, Bork P, Azeredo-Espin AML, Bryant DA, Schuster SC.

Sci Rep. 2017 Nov 24;7(1):16324. doi: 10.1038/s41598-017-16353-x.

35.

Complete Genome Sequence of Bacillus altitudinis Type Strain SGAir0031 Isolated from Tropical Air Collected in Singapore.

Vettath VK, Junqueira ACM, Uchida A, Purbojati RW, Houghton JNI, Chénard C, Drautz-Moses DI, Wong A, Kolundžija S, Clare ME, Lau KJX, Gaultier NE, Heinle CE, Premkrishnan BNV, Gusareva ES, Acerbi E, Yang L, Schuster SC.

Genome Announc. 2017 Nov 9;5(45). pii: e01260-17. doi: 10.1128/genomeA.01260-17. Erratum in: Microbiol Resour Announc. 2019 Aug 1;8(31):.

36.

Genome Sequence of Prosthecochloris sp. Strain HL-130-GSB from the Phylum Chlorobi.

Thiel V, Drautz-Moses DI, Purbojati RW, Schuster SC, Lindemann S, Bryant DA.

Genome Announc. 2017 Jun 15;5(24). pii: e00538-17. doi: 10.1128/genomeA.00538-17.

37.

Long-read sequencing uncovers the adaptive topography of a carnivorous plant genome.

Lan T, Renner T, Ibarra-Laclette E, Farr KM, Chang TH, Cervantes-Pérez SA, Zheng C, Sankoff D, Tang H, Purbojati RW, Putra A, Drautz-Moses DI, Schuster SC, Herrera-Estrella L, Albert VA.

Proc Natl Acad Sci U S A. 2017 May 30;114(22):E4435-E4441. doi: 10.1073/pnas.1702072114. Epub 2017 May 15. Erratum in: Proc Natl Acad Sci U S A. 2017 Jun 19;:.

38.

MetaLIMS, a simple open-source laboratory information management system for small metagenomic labs.

Heinle CE, Gaultier NPE, Miller D, Purbojati RW, Lauro FM.

Gigascience. 2017 Jun 1;6(6):1-6. doi: 10.1093/gigascience/gix025.

39.

Large-scale mitogenomics enables insights into Schizophora (Diptera) radiation and population diversity.

Junqueira AC, Azeredo-Espin AM, Paulo DF, Marinho MA, Tomsho LP, Drautz-Moses DI, Purbojati RW, Ratan A, Schuster SC.

Sci Rep. 2016 Feb 25;6:21762. doi: 10.1038/srep21762.

40.

In silico analyses of metagenomes from human atherosclerotic plaque samples.

Mitra S, Drautz-Moses DI, Alhede M, Maw MT, Liu Y, Purbojati RW, Yap ZH, Kushwaha KK, Gheorghe AG, Bjarnsholt T, Hansen GM, Sillesen HH, Hougen HP, Hansen PR, Yang L, Tolker-Nielsen T, Schuster SC, Givskov M.

Microbiome. 2015 Sep 3;3:38. doi: 10.1186/s40168-015-0100-y.

41.

Draft Genome Sequence of Klebsiella pneumoniae Strain KP-1.

Lee KW, Arumugam K, Purbojati RW, Tay QX, Williams RB, Kjelleberg S, Rice SA.

Genome Announc. 2013 Dec 19;1(6). pii: e01082-13. doi: 10.1128/genomeA.01082-13.

42.

BatMis: a fast algorithm for k-mismatch mapping.

Tennakoon C, Purbojati RW, Sung WK.

Bioinformatics. 2012 Aug 15;28(16):2122-8. doi: 10.1093/bioinformatics/bts339. Epub 2012 Jun 10.

PMID:
22689389

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