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Items: 1 to 50 of 103


Location-Dependent B-cell Function in Glioblastoma.

Pucci F.

Cancer Immunol Res. 2019 Dec;7(12):1902. doi: 10.1158/2326-6066.CIR-19-0774.


pydca v1.0: A Comprehensive Software for Direct Coupling Analysis of RNA and Protein Sequences.

Zerihun MB, Pucci F, Peter EK, Schug A.

Bioinformatics. 2019 Nov 28. pii: btz892. doi: 10.1093/bioinformatics/btz892. [Epub ahead of print]


Assessment of the Corticospinal Tract Profile in Pure Lower Motor Neuron Disease: A Diffusion Tensor Imaging Study.

Sarica A, Valentino P, Nisticò R, Barone S, Pucci F, Quattrone A, Cerasa A, Quattrone A.

Neurodegener Dis. 2019 Nov 12:1-11. doi: 10.1159/000503970. [Epub ahead of print]


SOLart: a structure-based method to predict protein solubility and aggregation.

Hou Q, Kwasigroch JM, Rooman M, Pucci F.

Bioinformatics. 2019 Oct 11. pii: btz773. doi: 10.1093/bioinformatics/btz773. [Epub ahead of print]


A comprehensive computational study of amino acid interactions in membrane proteins.

Mbaye MN, Hou Q, Basu S, Teheux F, Pucci F, Rooman M.

Sci Rep. 2019 Aug 19;9(1):12043. doi: 10.1038/s41598-019-48541-2.


Relation between DNA ionization potentials, single base substitutions and pathogenic variants.

Pucci F, Rooman M.

BMC Genomics. 2019 Jul 16;20(Suppl 8):551. doi: 10.1186/s12864-019-5867-y.


Explosive Magnetotail Activity.

Sitnov M, Birn J, Ferdousi B, Gordeev E, Khotyaintsev Y, Merkin V, Motoba T, Otto A, Panov E, Pritchett P, Pucci F, Raeder J, Runov A, Sergeev V, Velli M, Zhou X.

Space Sci Rev. 2019;215(4):31. doi: 10.1007/s11214-019-0599-5. Epub 2019 May 16. Review.


Shedding light on the dark matter of the biomolecular structural universe: Progress in RNA 3D structure prediction.

Pucci F, Schug A.

Methods. 2019 Jun 1;162-163:68-73. doi: 10.1016/j.ymeth.2019.04.012. Epub 2019 Apr 24. Review.


Deciphering noise amplification and reduction in open chemical reaction networks.

Pucci F, Rooman M.

J R Soc Interface. 2018 Dec 21;15(149):20180805. doi: 10.1098/rsif.2018.0805.


LUBAC determines chemotherapy resistance in squamous cell lung cancer.

Ruiz EJ, Diefenbacher ME, Nelson JK, Sancho R, Pucci F, Chakraborty A, Moreno P, Annibaldi A, Liccardi G, Encheva V, Mitter R, Rosenfeldt M, Snijders AP, Meier P, Calzado MA, Behrens A.

J Exp Med. 2019 Feb 4;216(2):450-465. doi: 10.1084/jem.20180742. Epub 2019 Jan 14.


Rechallenge for Patients With RAS and BRAF Wild-Type Metastatic Colorectal Cancer With Acquired Resistance to First-line Cetuximab and Irinotecan: A Phase 2 Single-Arm Clinical Trial.

Cremolini C, Rossini D, Dell'Aquila E, Lonardi S, Conca E, Del Re M, Busico A, Pietrantonio F, Danesi R, Aprile G, Tamburini E, Barone C, Masi G, Pantano F, Pucci F, Corsi DC, Pella N, Bergamo F, Rofi E, Barbara C, Falcone A, Santini D.

JAMA Oncol. 2019 Mar 1;5(3):343-350. doi: 10.1001/jamaoncol.2018.5080.


Myelin water fraction changes in febrile seizures.

Moldovan K, Boxerman JL, O'Muircheartaigh J, Dean D, Eyerly-Webb S, Cosgrove GR, Pucci FG, Deoni SCL, Spader HS.

Clin Neurol Neurosurg. 2018 Dec;175:61-67. doi: 10.1016/j.clineuro.2018.10.005. Epub 2018 Oct 10.


Computational analysis of the amino acid interactions that promote or decrease protein solubility.

Hou Q, Bourgeas R, Pucci F, Rooman M.

Sci Rep. 2018 Oct 2;8(1):14661. doi: 10.1038/s41598-018-32988-w.


Insights into noise modulation in oligomerization systems of increasing complexity.

Pucci F, Rooman M.

Phys Rev E. 2018 Jul;98(1-1):012137. doi: 10.1103/PhysRevE.98.012137.


Quantification of biases in predictions of protein stability changes upon mutations.

Pucci F, Bernaerts KV, Kwasigroch JM, Rooman M.

Bioinformatics. 2018 Nov 1;34(21):3659-3665. doi: 10.1093/bioinformatics/bty348.


Prediction and interpretation of deleterious coding variants in terms of protein structural stability.

Ancien F, Pucci F, Godfroid M, Rooman M.

Sci Rep. 2018 Mar 14;8(1):4480. doi: 10.1038/s41598-018-22531-2.


Bimodal CD40/Fas-Dependent Crosstalk between iNKT Cells and Tumor-Associated Macrophages Impairs Prostate Cancer Progression.

Cortesi F, Delfanti G, Grilli A, Calcinotto A, Gorini F, Pucci F, Lucianò R, Grioni M, Recchia A, Benigni F, Briganti A, Salonia A, De Palma M, Bicciato S, Doglioni C, Bellone M, Casorati G, Dellabona P.

Cell Rep. 2018 Mar 13;22(11):3006-3020. doi: 10.1016/j.celrep.2018.02.058.


In medio stat virtus: unanticipated consequences of telomere dysequilibrium.

Harrington L, Pucci F.

Philos Trans R Soc Lond B Biol Sci. 2018 Mar 5;373(1741). pii: 20160444. doi: 10.1098/rstb.2016.0444. Review.


Osteoblasts remotely supply lung tumors with cancer-promoting SiglecFhigh neutrophils.

Engblom C, Pfirschke C, Zilionis R, Da Silva Martins J, Bos SA, Courties G, Rickelt S, Severe N, Baryawno N, Faget J, Savova V, Zemmour D, Kline J, Siwicki M, Garris C, Pucci F, Liao HW, Lin YJ, Newton A, Yaghi OK, Iwamoto Y, Tricot B, Wojtkiewicz GR, Nahrendorf M, Cortez-Retamozo V, Meylan E, Hynes RO, Demay M, Klein A, Bredella MA, Scadden DT, Weissleder R, Pittet MJ.

Science. 2017 Dec 1;358(6367). pii: eaal5081. doi: 10.1126/science.aal5081.


Pulmonary metastasectomy for colorectal cancer: analysis of prognostic factors affecting survival.

Ampollini L, Gnetti L, Goldoni M, Viani L, Faedda E, Campanini N, Caruana P, Crafa P, Negri F, Pucci F, Leonardi F, Ventura L, Balestra V, Braggio C, Bocchialini G, Del Rio P, Silini EM, Carbognani P, Rusca M.

J Thorac Dis. 2017 Oct;9(Suppl 12):S1282-S1290. doi: 10.21037/jtd.2017.07.100.


SCooP: an accurate and fast predictor of protein stability curves as a function of temperature.

Pucci F, Kwasigroch JM, Rooman M.

Bioinformatics. 2017 Nov 1;33(21):3415-3422. doi: 10.1093/bioinformatics/btx417.


Physical and molecular bases of protein thermal stability and cold adaptation.

Pucci F, Rooman M.

Curr Opin Struct Biol. 2017 Feb;42:117-128. doi: 10.1016/ Epub 2016 Dec 29. Review.


PF4 Promotes Platelet Production and Lung Cancer Growth.

Pucci F, Rickelt S, Newton AP, Garris C, Nunes E, Evavold C, Pfirschke C, Engblom C, Mino-Kenudson M, Hynes RO, Weissleder R, Pittet MJ.

Cell Rep. 2016 Nov 8;17(7):1764-1772. doi: 10.1016/j.celrep.2016.10.031.


Lgr6 labels a rare population of mammary gland progenitor cells that are able to originate luminal mammary tumours.

Blaas L, Pucci F, Messal HA, Andersson AB, Josue Ruiz E, Gerling M, Douagi I, Spencer-Dene B, Musch A, Mitter R, Bhaw L, Stone R, Bornhorst D, Sesay AK, Jonkers J, Stamp G, Malanchi I, Toftgård R, Behrens A.

Nat Cell Biol. 2016 Dec;18(12):1346-1356. doi: 10.1038/ncb3434. Epub 2016 Oct 31.


Improved insights into protein thermal stability: from the molecular to the structurome scale.

Pucci F, Rooman M.

Philos Trans A Math Phys Eng Sci. 2016 Nov 13;374(2080). pii: 20160141.


The corticospinal tract profile in amyotrophic lateral sclerosis.

Sarica A, Cerasa A, Valentino P, Yeatman J, Trotta M, Barone S, Granata A, Nisticò R, Perrotta P, Pucci F, Quattrone A.

Hum Brain Mapp. 2017 Feb;38(2):727-739. doi: 10.1002/hbm.23412. Epub 2016 Sep 23.


MR parkinsonism index predicts vertical supranuclear gaze palsy in patients with PSP-parkinsonism.

Quattrone A, Morelli M, Williams DR, Vescio B, Arabia G, Nigro S, Nicoletti G, Salsone M, Novellino F, Nisticò R, Pucci F, Chiriaco C, Pugliese P, Bosco D, Caracciolo M.

Neurology. 2016 Sep 20;87(12):1266-73. doi: 10.1212/WNL.0000000000003125. Epub 2016 Aug 24.


Blood pressure levels and body mass index in Brazilian adults with Down syndrome.

Pucci F, Machado G, Solera E, Cenovicz F, Arruda C, Braga C, Nisihara R.

Sao Paulo Med J. 2016 Jul-Aug;134(4):330-4. doi: 10.1590/1516-3180.2016.0057180316.


Histological and morphometric study of the epididymus of Chinchilla lanigera Grey under controlled conditions in captivity.

Gramajo-Bühler MC, Pucci FJ, Sanchez-Toranzo G.

Zygote. 2016 Jun;24(3):355-63. doi: 10.1017/S096719941500026X.


Transforaminal Endoscopic Solution to a Kyphoplasty Complication: Technical Note.

Wagner R, Telfeian AE, Iprenburg M, Krzok G, Gokaslan Z, Choi DB, Pucci FG, Oyelese A.

World Neurosurg. 2016 Jul;91:195-8. doi: 10.1016/j.wneu.2016.04.013. Epub 2016 Apr 9.


SCS macrophages suppress melanoma by restricting tumor-derived vesicle-B cell interactions.

Pucci F, Garris C, Lai CP, Newton A, Pfirschke C, Engblom C, Alvarez D, Sprachman M, Evavold C, Magnuson A, von Andrian UH, Glatz K, Breakefield XO, Mempel TR, Weissleder R, Pittet MJ.

Science. 2016 Apr 8;352(6282):242-6. doi: 10.1126/science.aaf1328. Epub 2016 Mar 17.


Transforaminal Endoscopic Foraminoplasty and Discectomy for the Treatment of a Thoracic Disc Herniation.

Wagner R, Telfeian AE, Iprenburg M, Krzok G, Gokaslan Z, Choi DB, Pucci FG, Oyelese A.

World Neurosurg. 2016 Jun;90:194-198. doi: 10.1016/j.wneu.2016.02.086. Epub 2016 Feb 28.


Immunogenic Chemotherapy Sensitizes Tumors to Checkpoint Blockade Therapy.

Pfirschke C, Engblom C, Rickelt S, Cortez-Retamozo V, Garris C, Pucci F, Yamazaki T, Poirier-Colame V, Newton A, Redouane Y, Lin YJ, Wojtkiewicz G, Iwamoto Y, Mino-Kenudson M, Huynh TG, Hynes RO, Freeman GJ, Kroemer G, Zitvogel L, Weissleder R, Pittet MJ.

Immunity. 2016 Feb 16;44(2):343-54. doi: 10.1016/j.immuni.2015.11.024. Epub 2016 Feb 9.


Tle1 tumor suppressor negatively regulates inflammation in vivo and modulates NF-κB inflammatory pathway.

Ramasamy S, Saez B, Mukhopadhyay S, Ding D, Ahmed AM, Chen X, Pucci F, Yamin R, Wang J, Pittet MJ, Kelleher CM, Scadden DT, Sweetser DA.

Proc Natl Acad Sci U S A. 2016 Feb 16;113(7):1871-6. doi: 10.1073/pnas.1511380113. Epub 2016 Feb 1.


Towards an accurate prediction of the thermal stability of homologous proteins.

Pucci F, Rooman M.

J Biomol Struct Dyn. 2016 May;34(5):1132-42. doi: 10.1080/07391102.2015.1073631. Epub 2015 Sep 1.


Models of coronal heating, turbulence and fast reconnection.

Velli M, Pucci F, Rappazzo F, Tenerani A.

Philos Trans A Math Phys Eng Sci. 2015 May 28;373(2042). pii: 20140262. doi: 10.1098/rsta.2014.0262.


Polymorphism of the multidrug resistance 1 gene MDR1/ABCB1 C3435T and response to antiepileptic drug treatment in temporal lobe epilepsy.

Manna I, Gambardella A, Labate A, Mumoli L, Ferlazzo E, Pucci F, Aguglia U, Quattrone A.

Seizure. 2015 Jan;24:124-6. doi: 10.1016/j.seizure.2014.09.010. Epub 2014 Oct 2.


Autologous plasma rich in growth factors in the prevention of severe bleeding after teeth extractions in patients with bleeding disorders: a controlled comparison with fibrin glue.

Cocero N, Pucci F, Messina M, Pollio B, Mozzati M, Bergamasco L.

Blood Transfus. 2015 Apr;13(2):287-94. doi: 10.2450/2014.0124-14. Epub 2014 Oct 29.


Levetiracetam-induced neutropenia following traumatic brain injury.

Bunnell K, Pucci F.

Brain Inj. 2015;29(1):115-7. doi: 10.3109/02699052.2014.947622. Epub 2014 Aug 25.


Stability curve prediction of homologous proteins using temperature-dependent statistical potentials.

Pucci F, Rooman M.

PLoS Comput Biol. 2014 Jul 17;10(7):e1003689. doi: 10.1371/journal.pcbi.1003689. eCollection 2014 Jul.


Long-term potentiation of glycinergic synapses triggered by interleukin 1β.

Chirila AM, Brown TE, Bishop RA, Bellono NW, Pucci FG, Kauer JA.

Proc Natl Acad Sci U S A. 2014 Jun 3;111(22):8263-8. doi: 10.1073/pnas.1401013111. Epub 2014 May 15.


Everolimus in combination with octreotide long-acting repeatable in a first-line setting for patients with neuroendocrine tumors: an ITMO group study.

Bajetta E, Catena L, Fazio N, Pusceddu S, Biondani P, Blanco G, Ricci S, Aieta M, Pucci F, Valente M, Bianco N, Mauri CM, Spada F.

Cancer. 2014 Aug 15;120(16):2457-63. doi: 10.1002/cncr.28726. Epub 2014 Apr 18.


Protein thermostability prediction within homologous families using temperature-dependent statistical potentials.

Pucci F, Dhanani M, Dehouck Y, Rooman M.

PLoS One. 2014 Mar 19;9(3):e91659. doi: 10.1371/journal.pone.0091659. eCollection 2014.


Advanced stage gastric cancer and neoadjuvant chemotherapy: our experience in surgical resectability.

Del Rio P, Rocchi M, Dell'Abate P, Pucci F, Mazzetti C, Sianesi M.

Ann Ital Chir. 2013 Nov-Dec;84(6):623-9.


Dengue infection in children and adolescents: clinical profile in a reference hospital in northeast Brazil.

Pires Neto Rda J, de Sá SL, Pinho SC, Pucci FH, Teófilo CR, Evangelista PD, Thé CS, Bezerra DE, Lima JC, Ponte HJ, Daher Ede F, Coelho IC.

Rev Soc Bras Med Trop. 2013 Nov-Dec;46(6):765-8. doi: 10.1590/0037-8682-1716-2013.


Colorectal cancer patient on maintenance dialysis successfully treated with cetuximab.

Fontana E, Pucci F, Ardizzoni A.

Anticancer Drugs. 2014 Jan;25(1):120-2. doi: 10.1097/CAD.0000000000000025.


Telomeres, a busy platform for cell signaling.

Gardano L, Pucci F, Christian L, Le Bihan T, Harrington L.

Front Oncol. 2013 Jun 10;3:146. doi: 10.3389/fonc.2013.00146. eCollection 2013.


PHD2 regulates arteriogenic macrophages through TIE2 signalling.

Hamm A, Veschini L, Takeda Y, Costa S, Delamarre E, Squadrito ML, Henze AT, Wenes M, Serneels J, Pucci F, Roncal C, Anisimov A, Alitalo K, De Palma M, Mazzone M.

EMBO Mol Med. 2013 Jun;5(6):843-57. doi: 10.1002/emmm.201302695. Epub 2013 Apr 25.


Short telomeres in ESCs lead to unstable differentiation.

Pucci F, Gardano L, Harrington L.

Cell Stem Cell. 2013 Apr 4;12(4):479-86. doi: 10.1016/j.stem.2013.01.018.

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