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Items: 19

1.

Metagenomics reveals niche partitioning within the phototrophic zone of a microbial mat.

Lee JZ, Everroad RC, Karaoz U, Detweiler AM, Pett-Ridge J, Weber PK, Prufert-Bebout L, Bebout BM.

PLoS One. 2018 Sep 11;13(9):e0202792. doi: 10.1371/journal.pone.0202792. eCollection 2018.

2.

Metagenomic analysis of intertidal hypersaline microbial mats from Elkhorn Slough, California, grown with and without molybdate.

D'haeseleer P, Lee JZ, Prufert-Bebout L, Burow LC, Detweiler AM, Weber PK, Karaoz U, Brodie EL, Glavina Del Rio T, Tringe SG, Bebout BM, Pett-Ridge J.

Stand Genomic Sci. 2017 Nov 15;12:67. doi: 10.1186/s40793-017-0279-6. eCollection 2017.

3.

A radiative transfer modeling approach for accurate interpretation of PAM fluorometry experiments in suspended algal cultures.

Murphy TE, Prufert-Bebout LE, Bebout BM.

Biotechnol Prog. 2016 Nov;32(6):1601-1608. doi: 10.1002/btpr.2394. Epub 2016 Nov 14.

PMID:
27801554
4.

Permanent draft genome of strain ESFC-1: ecological genomics of a newly discovered lineage of filamentous diazotrophic cyanobacteria.

Everroad RC, Stuart RK, Bebout BM, Detweiler AM, Lee JZ, Woebken D, Prufert-Bebout L, Pett-Ridge J.

Stand Genomic Sci. 2016 Aug 24;11(1):53. doi: 10.1186/s40793-016-0174-6. eCollection 2016.

5.

A Novel Microsensor for Measuring Angular Distribution of Radiative Intensity.

Murphy TE, Pilorz S, Prufert-Bebout L, Bebout B.

Photochem Photobiol. 2015 Jul-Aug;91(4):862-8. doi: 10.1111/php.12452. Epub 2015 Mar 28.

PMID:
25763775
6.

Revisiting N₂ fixation in Guerrero Negro intertidal microbial mats with a functional single-cell approach.

Woebken D, Burow LC, Behnam F, Mayali X, Schintlmeister A, Fleming ED, Prufert-Bebout L, Singer SW, Cortés AL, Hoehler TM, Pett-Ridge J, Spormann AM, Wagner M, Weber PK, Bebout BM.

ISME J. 2015 Feb;9(2):485-96. doi: 10.1038/ismej.2014.144. Epub 2014 Oct 10.

7.

Characterization of methane flux from photosynthetic oxidation ponds in a wastewater treatment plant.

Detweiler AM, Bebout BM, Frisbee AE, Kelley CA, Chanton JP, Prufert-Bebout LE.

Water Sci Technol. 2014;70(6):980-9. doi: 10.2166/wst.2014.317.

PMID:
25259485
8.

Identification of Desulfobacterales as primary hydrogenotrophs in a complex microbial mat community.

Burow LC, Woebken D, Marshall IP, Singer SW, Pett-Ridge J, Prufert-Bebout L, Spormann AM, Bebout BM, Weber PK, Hoehler TM.

Geobiology. 2014 May;12(3):221-30. doi: 10.1111/gbi.12080.

PMID:
24730641
9.

Draft Genome Sequence of an Oscillatorian Cyanobacterium, Strain ESFC-1.

Everroad RC, Woebken D, Singer SW, Burow LC, Kyrpides N, Woyke T, Goodwin L, Detweiler A, Prufert-Bebout L, Pett-Ridge J.

Genome Announc. 2013 Aug 1;1(4). pii: e00527-13. doi: 10.1128/genomeA.00527-13.

10.

Anoxic carbon flux in photosynthetic microbial mats as revealed by metatranscriptomics.

Burow LC, Woebken D, Marshall IP, Lindquist EA, Bebout BM, Prufert-Bebout L, Hoehler TM, Tringe SG, Pett-Ridge J, Weber PK, Spormann AM, Singer SW.

ISME J. 2013 Apr;7(4):817-29. doi: 10.1038/ismej.2012.150. Epub 2012 Nov 29.

11.

Identification of a novel cyanobacterial group as active diazotrophs in a coastal microbial mat using NanoSIMS analysis.

Woebken D, Burow LC, Prufert-Bebout L, Bebout BM, Hoehler TM, Pett-Ridge J, Spormann AM, Weber PK, Singer SW.

ISME J. 2012 Jul;6(7):1427-39. doi: 10.1038/ismej.2011.200. Epub 2012 Jan 12.

12.

Hydrogen production in photosynthetic microbial mats in the Elkhorn Slough estuary, Monterey Bay.

Burow LC, Woebken D, Bebout BM, McMurdie PJ, Singer SW, Pett-Ridge J, Prufert-Bebout L, Spormann AM, Weber PK, Hoehler TM.

ISME J. 2012 Apr;6(4):863-74. doi: 10.1038/ismej.2011.142. Epub 2011 Oct 20.

13.

A salinity and sulfate manipulation of hypersaline microbial mats reveals stasis in the cyanobacterial community structure.

Green SJ, Blackford C, Bucki P, Jahnke LL, Prufert-Bebout L.

ISME J. 2008 May;2(5):457-70. doi: 10.1038/ismej.2008.6. Epub 2008 Feb 21.

PMID:
18288215
14.

Shifts in methanogen community structure and function associated with long-term manipulation of sulfate and salinity in a hypersaline microbial mat.

Smith JM, Green SJ, Kelley CA, Prufert-Bebout L, Bebout BM.

Environ Microbiol. 2008 Feb;10(2):386-94. doi: 10.1111/j.1462-2920.2007.01459.x. Epub 2007 Dec 19.

PMID:
18177370
15.

Long-term manipulations of intact microbial mat communities in a greenhouse collaboratory: simulating earth's present and past field environments.

Bebout BM, Carpenter SP, Des Marais DJ, Discipulo M, Embaye T, Garcia-Pichel F, Hoehler TM, Hogan M, Jahnke LL, Keller RM, Miller SR, Prufert-Bebout LE, Raleigh C, Rothrock M, Turk K.

Astrobiology. 2002 Winter;2(4):383-402.

PMID:
12593778
16.

The role of microbes in accretion, lamination and early lithification of modern marine stromatolites.

Reid RP, Visscher PT, Decho AW, Stolz JF, Bebout BM, Dupraz C, Macintyre IG, Paerl HW, Pinckney JL, Prufert-Bebout L, Steppe TF, DesMarais DJ.

Nature. 2000 Aug 31;406(6799):989-92.

PMID:
10984051
17.

Phenotypic and phylogenetic analyses show Microcoleus chthonoplastes to be a cosmopolitan cyanobacterium.

Garcia-Pichel F, Prufert-Bebout L, Muyzer G.

Appl Environ Microbiol. 1996 Sep;62(9):3284-91.

18.
19.

Growth, nitrogen fixation, and spectral attenuation in cultivated trichodesmium species.

Prufert-Bebout L, Paerl HW, Lassen C.

Appl Environ Microbiol. 1993 May;59(5):1367-75.

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