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Items: 24


Temperature and nutrient levels correspond with lineage-specific microdiversification in the ubiquitous and abundant Limnohabitans freshwater genus.

Props R, Denef VJ.

Appl Environ Microbiol. 2020 Mar 13. pii: AEM.00140-20. doi: 10.1128/AEM.00140-20. [Epub ahead of print]


Microhabitats are associated with diversity-productivity relationships in freshwater bacterial communities.

Schmidt ML, Biddanda BA, Weinke AD, Chiang E, Januska F, Props R, Denef VJ.

FEMS Microbiol Ecol. 2020 Apr 1;96(4). pii: fiaa029. doi: 10.1093/femsec/fiaa029.


Short-term supplementation of celecoxib-shifted butyrate production on a simulated model of the gut microbial ecosystem and ameliorated in vitro inflammation.

Hernandez-Sanabria E, Heiremans E, Calatayud Arroyo M, Props R, Leclercq L, Snoeys J, Van de Wiele T.

NPJ Biofilms Microbiomes. 2020 Feb 19;6(1):9. doi: 10.1038/s41522-020-0119-0.


Adaptation and characterization of thermophilic anammox in bioreactors.

Vandekerckhove TGL, Props R, Carvajal-Arroyo JM, Boon N, Vlaeminck SE.

Water Res. 2020 Apr 1;172:115462. doi: 10.1016/j.watres.2019.115462. Epub 2020 Jan 10.


Discriminating Bacterial Phenotypes at the Population and Single-Cell Level: A Comparison of Flow Cytometry and Raman Spectroscopy Fingerprinting.

García-Timermans C, Rubbens P, Heyse J, Kerckhof FM, Props R, Skirtach AG, Waegeman W, Boon N.

Cytometry A. 2019 Dec 30. doi: 10.1002/cyto.a.23952. [Epub ahead of print]


Flow cytometry for rapid characterisation of microbial community dynamics in waste stabilisation ponds.

Coggins LX, Larma I, Hinchliffe A, Props R, Ghadouani A.

Water Res. 2020 Feb 1;169:115243. doi: 10.1016/j.watres.2019.115243. Epub 2019 Oct 31.


Randomized Lasso Links Microbial Taxa with Aquatic Functional Groups Inferred from Flow Cytometry.

Rubbens P, Schmidt ML, Props R, Biddanda BA, Boon N, Waegeman W, Denef VJ.

mSystems. 2019 Sep 10;4(5). pii: e00093-19. doi: 10.1128/mSystems.00093-19.


Propionate-Producing Consortium Restores Antibiotic-Induced Dysbiosis in a Dynamic in vitro Model of the Human Intestinal Microbial Ecosystem.

El Hage R, Hernandez-Sanabria E, Calatayud Arroyo M, Props R, Van de Wiele T.

Front Microbiol. 2019 May 31;10:1206. doi: 10.3389/fmicb.2019.01206. eCollection 2019.


Cyt-Geist: Current and Future Challenges in Cytometry: Reports of the CYTO 2018 Conference Workshops.

Czechowska K, Lannigan J, Wang L, Arcidiacono J, Ashhurst TM, Barnard RM, Bauer S, Bispo C, Bonilla DL, Brinkman RR, Cabanski M, Chang HD, Chakrabarti L, Chojnowski G, Cotleur B, Degheidy H, Dela Cruz GV, Eck S, Elliott J, Errington R, Filby A, Gagnon D, Gardner R, Green C, Gregory M, Groves CJ, Hall C, Hammes F, Hedrick M, Hoffman R, Icha J, Ivaska J, Jenner DC, Jones D, Kerckhof FM, Kukat C, Lanham D, Leavesley S, Lee M, Lin-Gibson S, Litwin V, Liu Y, Molloy J, Moore JS, Müller S, Nedbal J, Niesner R, Nitta N, Ohlsson-Wilhelm B, Paul NE, Perfetto S, Portat Z, Props R, Radtke S, Rayanki R, Rieger A, Rogers S, Rubbens P, Salomon R, Schiemann M, Sharpe J, Sonder SU, Stewart JJ, Sun Y, Ulrich H, Van Isterdael G, Vitaliti A, van Vreden C, Weber M, Zimmermann J, Vacca G, Wallace P, Tárnok A.

Cytometry A. 2019 Jun;95(6):598-644. doi: 10.1002/cyto.a.23777. No abstract available.


Coculturing Bacteria Leads to Reduced Phenotypic Heterogeneities.

Heyse J, Buysschaert B, Props R, Rubbens P, Skirtach AG, Waegeman W, Boon N.

Appl Environ Microbiol. 2019 Apr 4;85(8). pii: e02814-18. doi: 10.1128/AEM.02814-18. Print 2019 Apr 15.


Gene Expansion and Positive Selection as Bacterial Adaptations to Oligotrophic Conditions.

Props R, Monsieurs P, Vandamme P, Leys N, Denef VJ, Boon N.

mSphere. 2019 Feb 6;4(1). pii: e00011-19. doi: 10.1128/mSphereDirect.00011-19.


Detection of microbial disturbances in a drinking water microbial community through continuous acquisition and advanced analysis of flow cytometry data.

Props R, Rubbens P, Besmer M, Buysschaert B, Sigrist J, Weilenmann H, Waegeman W, Boon N, Hammes F.

Water Res. 2018 Nov 15;145:73-82. doi: 10.1016/j.watres.2018.08.013. Epub 2018 Aug 7.


Initial evenness determines diversity and cell density dynamics in synthetic microbial ecosystems.

Ehsani E, Hernandez-Sanabria E, Kerckhof FM, Props R, Vilchez-Vargas R, Vital M, Pieper DH, Boon N.

Sci Rep. 2018 Jan 10;8(1):340. doi: 10.1038/s41598-017-18668-1.


Stripping flow cytometry: How many detectors do we need for bacterial identification?

Rubbens P, Props R, Garcia-Timermans C, Boon N, Waegeman W.

Cytometry A. 2017 Dec;91(12):1184-1191. doi: 10.1002/cyto.a.23284. Epub 2017 Nov 22.


Laboratory-Scale Simulation and Real-Time Tracking of a Microbial Contamination Event and Subsequent Shock-Chlorination in Drinking Water.

Besmer MD, Sigrist JA, Props R, Buysschaert B, Mao G, Boon N, Hammes F.

Front Microbiol. 2017 Oct 4;8:1900. doi: 10.3389/fmicb.2017.01900. eCollection 2017.


Flow cytometric monitoring of bacterioplankton phenotypic diversity predicts high population-specific feeding rates by invasive dreissenid mussels.

Props R, Schmidt ML, Heyse J, Vanderploeg HA, Boon N, Denef VJ.

Environ Microbiol. 2018 Feb;20(2):521-534. doi: 10.1111/1462-2920.13953. Epub 2017 Nov 3.


Reconciliation between operational taxonomic units and species boundaries.

Mysara M, Vandamme P, Props R, Kerckhof FM, Leys N, Boon N, Raes J, Monsieurs P.

FEMS Microbiol Ecol. 2017 Apr 1;93(4). doi: 10.1093/femsec/fix029.


A Clostridium Group IV Species Dominates and Suppresses a Mixed Culture Fermentation by Tolerance to Medium Chain Fatty Acids Products.

Andersen SJ, De Groof V, Khor WC, Roume H, Props R, Coma M, Rabaey K.

Front Bioeng Biotechnol. 2017 Feb 20;5:8. doi: 10.3389/fbioe.2017.00008. eCollection 2017.


Flow Cytometric Single-Cell Identification of Populations in Synthetic Bacterial Communities.

Rubbens P, Props R, Boon N, Waegeman W.

PLoS One. 2017 Jan 25;12(1):e0169754. doi: 10.1371/journal.pone.0169754. eCollection 2017.


Biological Recovery of Platinum Complexes from Diluted Aqueous Streams by Axenic Cultures.

Maes S, Props R, Fitts JP, De Smet R, Vanhaecke F, Boon N, Hennebel T.

PLoS One. 2017 Jan 3;12(1):e0169093. doi: 10.1371/journal.pone.0169093. eCollection 2017.


Presence does not imply activity: DNA and RNA patterns differ in response to salt perturbation in anaerobic digestion.

De Vrieze J, Regueiro L, Props R, Vilchez-Vargas R, Jáuregui R, Pieper DH, Lema JM, Carballa M.

Biotechnol Biofuels. 2016 Nov 9;9:244. doi: 10.1186/s13068-016-0652-5. eCollection 2016.


Absolute quantification of microbial taxon abundances.

Props R, Kerckhof FM, Rubbens P, De Vrieze J, Hernandez Sanabria E, Waegeman W, Monsieurs P, Hammes F, Boon N.

ISME J. 2017 Feb;11(2):584-587. doi: 10.1038/ismej.2016.117. Epub 2016 Sep 9.


5-Fluorouracil sensitivity varies among oral micro-organisms.

Vanlancker E, Vanhoecke B, Smet R, Props R, Van de Wiele T.

J Med Microbiol. 2016 Aug;65(8):775-783. doi: 10.1099/jmm.0.000292. Epub 2016 Jun 13.


Platinum Recovery from Synthetic Extreme Environments by Halophilic Bacteria.

Maes S, Props R, Fitts JP, Smet RD, Vilchez-Vargas R, Vital M, Pieper DH, Vanhaecke F, Boon N, Hennebel T.

Environ Sci Technol. 2016 Mar 1;50(5):2619-26. doi: 10.1021/acs.est.5b05355. Epub 2016 Feb 19.


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