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Items: 32

1.

Kaiso Gene Knockout Promotes Somatic Cell Reprogramming.

Kaplun DS, Fok RE, Korostina VS, Prokhortchouk EB, Zhenilo SV.

Biochemistry (Mosc). 2019 Mar;84(3):283-290. doi: 10.1134/S0006297919030106.

PMID:
31221066
2.

New insights from Opisthorchis felineus genome: update on genomics of the epidemiologically important liver flukes.

Ershov NI, Mordvinov VA, Prokhortchouk EB, Pakharukova MY, Gunbin KV, Ustyantsev K, Genaev MA, Blinov AG, Mazur A, Boulygina E, Tsygankova S, Khrameeva E, Chekanov N, Fan G, Xiao A, Zhang H, Xu X, Yang H, Solovyev V, Lee SM, Liu X, Afonnikov DA, Skryabin KG.

BMC Genomics. 2019 May 22;20(1):399. doi: 10.1186/s12864-019-5752-8.

3.

VHL inactivation without hypoxia is sufficient to achieve genome hypermethylation.

Artemov AV, Zhigalova N, Zhenilo S, Mazur AM, Prokhortchouk EB.

Sci Rep. 2018 Jul 13;8(1):10667. doi: 10.1038/s41598-018-28795-y.

4.

Gene Expression in the Three-Spined Stickleback (Gasterosteus aculeatus) of Marine and Freshwater Ecotypes.

Rastorguev SM, Nedoluzhko AV, Gruzdeva NM, Boulygina ES, Tsygankova SV, Oshchepkov DY, Mazur AM, Prokhortchouk EB, Skryabin KG.

Acta Naturae. 2018 Jan-Mar;10(1):66-74.

5.

Differential miRNA expression in the three-spined stickleback, response to environmental changes.

Rastorguev SM, Nedoluzhko AV, Gruzdeva NM, Boulygina ES, Sharko FS, Ibragimova AS, Tsygankova SV, Artemov AV, Skryabin KG, Prokhortchouk EB.

Sci Rep. 2017 Dec 22;7(1):18089. doi: 10.1038/s41598-017-18128-w.

6.

[CRISPR/Cas9-editing-based modeling of hypoxia in renal cancer cells].

Zhigalova NA, Zhenilo SV, Artemov AV, Prokhortchouk EB.

Mol Biol (Mosk). 2017 Sep-Oct;51(5):836-840. doi: 10.7868/S0026898417050111. Russian.

7.

Genome-Wide DNA Methylation Profiling Reveals Epigenetic Adaptation of Stickleback to Marine and Freshwater Conditions.

Artemov AV, Mugue NS, Rastorguev SM, Zhenilo S, Mazur AM, Tsygankova SV, Boulygina ES, Kaplun D, Nedoluzhko AV, Medvedeva YA, Prokhortchouk EB.

Mol Biol Evol. 2017 Sep 1;34(9):2203-2213. doi: 10.1093/molbev/msx156.

PMID:
28873953
8.

The loss of photosynthetic pathways in the plastid and nuclear genomes of the non-photosynthetic mycoheterotrophic eudicot Monotropa hypopitys.

Ravin NV, Gruzdev EV, Beletsky AV, Mazur AM, Prokhortchouk EB, Filyushin MA, Kochieva EZ, Kadnikov VV, Mardanov AV, Skryabin KG.

BMC Plant Biol. 2016 Nov 16;16(Suppl 3):238. doi: 10.1186/s12870-016-0929-7.

9.

Metagenomic analysis of microbial community of a parasitoid wasp Megaphragma amalphitanum.

Nedoluzhko AV, Sharko FS, Tsygankova SV, Boulygina ES, Sokolov AS, Rastorguev SM, Kadnikov VV, Mardanov AV, Ravin NV, Mazur AM, Polilov AA, Gruzdeva NM, Prokhortchouk EB, Skryabin KG.

Genom Data. 2016 Dec 21;11:87-88. doi: 10.1016/j.gdata.2016.12.007. eCollection 2017 Mar.

10.

De novo transcriptome assembly of the mycoheterotrophic plant Monotropa hypopitys.

Beletsky AV, Filyushin MA, Gruzdev EV, Mazur AM, Prokhortchouk EB, Kochieva EZ, Mardanov AV, Ravin NV, Skryabin KG.

Genom Data. 2016 Nov 30;11:60-61. eCollection 2017 Mar.

11.

State of the Art of Chromosome 18-Centric HPP in 2016: Transcriptome and Proteome Profiling of Liver Tissue and HepG2 Cells.

Poverennaya EV, Kopylov AT, Ponomarenko EA, Ilgisonis EV, Zgoda VG, Tikhonova OV, Novikova SE, Farafonova TE, Kiseleva YY, Radko SP, Vakhrushev IV, Yarygin KN, Moshkovskii SA, Kiseleva OI, Lisitsa AV, Sokolov AS, Mazur AM, Prokhortchouk EB, Skryabin KG, Kostrjukova ES, Tyakht AV, Gorbachev AY, Ilina EN, Govorun VM, Archakov AI.

J Proteome Res. 2016 Nov 4;15(11):4030-4038. Epub 2016 Aug 29.

PMID:
27527821
12.

Epigenetics of Ancient DNA.

Zhenilo SV, Sokolov AS, Prokhortchouk EB.

Acta Naturae. 2016 Jul-Sep;8(3):72-76.

13.

Report on noninvasive prenatal testing: classical and alternativeĀ approaches.

Pantiukh KS, Chekanov NN, Zaigrin IV, Zotov AM, Mazur AM, Prokhortchouk EB.

F1000Res. 2016 Apr 22;5:722. eCollection 2016.

14.

Identification of novel microRNA genes in freshwater and marine ecotypes of the three-spined stickleback (Gasterosteus aculeatus).

Rastorguev SM, Nedoluzhko AV, Sharko FS, Boulygina ES, Sokolov AS, Gruzdeva NM, Skryabin KG, Prokhortchouk EB.

Mol Ecol Resour. 2016 Nov;16(6):1491-1498. doi: 10.1111/1755-0998.12545. Epub 2016 Jun 30.

PMID:
27238497
15.

Deep-sequence profiling of miRNAs and their target prediction in Monotropa hypopitys.

Shchennikova AV, Beletsky AV, Shulga OA, Mazur AM, Prokhortchouk EB, Kochieva EZ, Ravin NV, Skryabin KG.

Plant Mol Biol. 2016 Jul;91(4-5):441-58. doi: 10.1007/s11103-016-0478-3. Epub 2016 Apr 20.

PMID:
27097902
16.
17.

Erratum to: comparison of the three-dimensional organization of sperm and fibroblast genomes using the Hi-C approach.

Battulin N, Fishman VS, Mazur AM, Pomaznoy M, Khabarova AA, Afonnikov DA, Prokhortchouk EB, Serov OL.

Genome Biol. 2016 Jan 14;17:6. doi: 10.1186/s13059-016-0868-5. No abstract available.

18.

Mitochondrial genome of Megaphragma amalphitanum (Hymenoptera: Trichogrammatidae).

Nedoluzhko AV, Sharko FS, Boulygina ES, Tsygankova SV, Sokolov AS, Mazur AM, Polilov AA, Prokhortchouk EB, Skryabin KG.

Mitochondrial DNA A DNA Mapp Seq Anal. 2016 Nov;27(6):4526-4527. Epub 2015 Nov 30.

PMID:
26617282
19.

Knockout Zbtb33 gene results in an increased locomotion, exploration and pre-pulse inhibition in mice.

Kulikov AV, Korostina VS, Kulikova EA, Fursenko DV, Akulov AE, Moshkin MP, Prokhortchouk EB.

Behav Brain Res. 2016 Jan 15;297:76-83. doi: 10.1016/j.bbr.2015.10.003. Epub 2015 Oct 22.

PMID:
26454239
20.

[S100A3 is a new target gene of Kaiso in mouse skin].

Zhigalova NA, Sokolov AS, Prokhortchouk EB, Zhenilo SV.

Mol Biol (Mosk). 2015 Mar-Apr;49(2):362-5. Russian. No abstract available.

21.

Comparison of the three-dimensional organization of sperm and fibroblast genomes using the Hi-C approach.

Battulin N, Fishman VS, Mazur AM, Pomaznoy M, Khabarova AA, Afonnikov DA, Prokhortchouk EB, Serov OL.

Genome Biol. 2015 Apr 14;16:77. doi: 10.1186/s13059-015-0642-0. Erratum in: Genome Biol. 2016;17:6.

22.

Analysis of the Mitochondrial Genome of a Novosvobodnaya Culture Representative using Next-Generation Sequencing and Its Relation to the Funnel Beaker Culture.

Nedoluzhko AV, Boulygina ES, Sokolov AS, Tsygankova SV, Gruzdeva NM, Rezepkin AD, Prokhortchouk EB.

Acta Naturae. 2014 Apr;6(2):31-5.

23.

High-throughput SNP-genotyping analysis of the relationships among Ponto-Caspian sturgeon species.

Rastorguev SM, Nedoluzhko AV, Mazur AM, Gruzdeva NM, Volkov AA, Barmintseva AE, Mugue NS, Prokhortchouk EB.

Ecol Evol. 2013 Aug;3(8):2612-8. doi: 10.1002/ece3.659. Epub 2013 Jul 1.

24.

Study of Alzheimer family case reveals hemochromotosis-associated HFE mutation.

Artemov AV, Boulygina ES, Tsygankova SV, Nedoluzhko AV, Chekanov NN, Gruzdeva NM, Selezneva ND, Roshchina IF, Gavrilova SI, Velichkovsky BB, Skryabin KG, Prokhortchouk EB.

Hum Genome Var. 2014 Jul 31;1:14004. doi: 10.1038/hgv.2014.4. eCollection 2014.

25.

Metagenomic Analysis of the Dynamic Changes in the Gut Microbiome of the Participants of the MARS-500 Experiment, Simulating Long Term Space Flight.

Mardanov AV, Babykin MM, Beletsky AV, Grigoriev AI, Zinchenko VV, Kadnikov VV, Kirpichnikov MP, Mazur AM, Nedoluzhko AV, Novikova ND, Prokhortchouk EB, Ravin NV, Skryabin KG, Shestakov SV.

Acta Naturae. 2013 Jul;5(3):116-25.

26.

Modeling myocardial infarction in mice: methodology, monitoring, pathomorphology.

Ovsepyan AA, Panchenkov DN, Prokhortchouk EB, Telegin GB, Zhigalova NA, Golubev EP, Sviridova TE, Matskeplishvili ST, Skryabin KG, Buziashvili UI.

Acta Naturae. 2011 Jan;3(1):107-15.

27.

Individual Genome of the Russian Male: SNP Calling and a de novo Assembly of Unmapped Reads.

Chekanov NN, Boulygina ES, Beletskiy AV, Prokhortchouk EB, Skryabin KG.

Acta Naturae. 2010 Jul;2(3):122-6.

28.

Combining two technologies for full genome sequencing of human.

Skryabin KG, Prokhortchouk EB, Mazur AM, Boulygina ES, Tsygankova SV, Nedoluzhko AV, Rastorguev SM, Matveev VB, Chekanov NN, D A G, Teslyuk AB, Gruzdeva NM, Velikhov VE, Zaridze DG, Kovalchuk MV.

Acta Naturae. 2009 Oct;1(3):102-7.

29.

Novel repressor of the human FMR1 gene - identification of p56 human (GCC)(n)-binding protein as a KrĆ¼ppel-like transcription factor ZF5.

Orlov SV, Kuteykin-Teplyakov KB, Ignatovich IA, Dizhe EB, Mirgorodskaya OA, Grishin AV, Guzhova OB, Prokhortchouk EB, Guliy PV, Perevozchikov AP.

FEBS J. 2007 Sep;274(18):4848-62. Epub 2007 Aug 21.

30.

High constitutive level of NF-kappaB is crucial for viability of adenocarcinoma cells.

Smirnov AS, Ruzov AS, Budanov AV, Prokhortchouk AV, Ivanov AV, Prokhortchouk EB.

Cell Death Differ. 2001 Jun;8(6):621-30.

31.

Molecular cloning and characterization of the mouse tag7 gene encoding a novel cytokine.

Kiselev SL, Kustikova OS, Korobko EV, Prokhortchouk EB, Kabishev AA, Lukanidin EM, Georgiev GP.

J Biol Chem. 1998 Jul 17;273(29):18633-9.

32.

A minisatellite "core" element constitutes a novel, chromatin-specific activator of mts1 gene transcription.

Prokhortchouk EB, Prokhortchouk AV, Rouzov AS, Kiselev SL, Lukanidin EM, Georgiev GP.

J Mol Biol. 1998 Jul 10;280(2):227-36.

PMID:
9654447

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