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Items: 1 to 50 of 92

1.

Interpretation of spectroscopic data using molecular simulations for the secondary active transporter BetP.

Leone V, Waclawska I, Kossmann K, Koshy C, Sharma M, Prisner TF, Ziegler C, Endeward B, Forrest LR.

J Gen Physiol. 2019 Feb 6. pii: jgp.201812111. doi: 10.1085/jgp.201812111. [Epub ahead of print]

PMID:
30728216
2.

Dynamic Nuclear Polarization of 13 C Nuclei in the Liquid State over a 10 Tesla Field Range.

Orlando T, Dervişoğlu R, Levien M, Tkach I, Prisner TF, Andreas LB, Denysenkov VP, Bennati M.

Angew Chem Int Ed Engl. 2019 Jan 28;58(5):1402-1406. doi: 10.1002/anie.201811892. Epub 2018 Dec 20.

PMID:
30485626
3.

"End-to-end" stacking of small dsRNA.

Erlenbach N, Grünewald C, Krstic B, Heckel A, Prisner TF.

RNA. 2019 Feb;25(2):239-246. doi: 10.1261/rna.068130.118. Epub 2018 Nov 7.

PMID:
30404925
4.

Influence of Mg2+ on the conformational flexibility of a tetracycline aptamer.

Hetzke T, Vogel M, Gophane DB, Weigand JE, Suess B, Sigurdsson ST, Prisner TF.

RNA. 2019 Jan;25(1):158-167. doi: 10.1261/rna.068684.118. Epub 2018 Oct 18.

PMID:
30337459
5.

Noncovalent spin-labeling of RNA: the aptamer approach.

Saha S, Hetzke T, Prisner TF, Sigurdsson ST.

Chem Commun (Camb). 2018 Oct 16;54(83):11749-11752. doi: 10.1039/c8cc05597a.

PMID:
30276367
6.

Phosphoramidite building blocks with protected nitroxides for the synthesis of spin-labeled DNA and RNA.

Weinrich T, Jaumann EA, Scheffer UM, Prisner TF, Göbel MW.

Beilstein J Org Chem. 2018 Jun 26;14:1563-1569. doi: 10.3762/bjoc.14.133. eCollection 2018.

7.

Dynamics of Nucleic Acids at Room Temperature Revealed by Pulsed EPR Spectroscopy.

Gränz M, Erlenbach N, Spindler P, Gophane DB, Stelzl LS, Sigurdsson ST, Prisner TF.

Angew Chem Int Ed Engl. 2018 Aug 13;57(33):10540-10543. doi: 10.1002/anie.201803682. Epub 2018 Jul 13.

PMID:
29858557
8.

Nitroxide-nitroxide and nitroxide-metal distance measurements in transition metal complexes with two or three paramagnetic centres give access to thermodynamic and kinetic stabilities.

Giannoulis A, Ackermann K, Spindler PE, Higgins C, Cordes DB, Slawin AMZ, Prisner TF, Bode BE.

Phys Chem Chem Phys. 2018 Apr 25;20(16):11196-11205. doi: 10.1039/c8cp01611a.

PMID:
29629718
9.

A Cytidine Phosphoramidite with Protected Nitroxide Spin Label: Synthesis of a Full-Length TAR RNA and Investigation by In-Line Probing and EPR Spectroscopy.

Weinrich T, Jaumann EA, Scheffer U, Prisner TF, Göbel MW.

Chemistry. 2018 Apr 20;24(23):6202-6207. doi: 10.1002/chem.201800167. Epub 2018 Apr 6.

PMID:
29485736
10.

Chain Assembly and Disassembly Processes Differently Affect the Conformational Space of Ubiquitin Chains.

Kniss A, Schuetz D, Kazemi S, Pluska L, Spindler PE, Rogov VV, Husnjak K, Dikic I, Güntert P, Sommer T, Prisner TF, Dötsch V.

Structure. 2018 Feb 6;26(2):249-258.e4. doi: 10.1016/j.str.2017.12.011. Epub 2018 Jan 18.

11.

A semi-rigid isoindoline-derived nitroxide spin label for RNA.

Gophane DB, Endeward B, Prisner TF, Sigurdsson ST.

Org Biomol Chem. 2018 Jan 31;16(5):816-824. doi: 10.1039/c7ob02870a.

PMID:
29326999
12.

Conformational Coupling and trans-Inhibition in the Human Antigen Transporter Ortholog TmrAB Resolved with Dipolar EPR Spectroscopy.

Barth K, Hank S, Spindler PE, Prisner TF, Tampé R, Joseph B.

J Am Chem Soc. 2018 Apr 4;140(13):4527-4533. doi: 10.1021/jacs.7b12409. Epub 2018 Jan 30.

PMID:
29308886
13.

Determination of helix orientations in a flexible DNA by multi-frequency EPR spectroscopy.

Grytz CM, Kazemi S, Marko A, Cekan P, Güntert P, Sigurdsson ST, Prisner TF.

Phys Chem Chem Phys. 2017 Nov 15;19(44):29801-29811. doi: 10.1039/c7cp04997h.

PMID:
29090294
14.

Resolving the Conformational Dynamics of DNA with Ångstrom Resolution by Pulsed Electron-Electron Double Resonance and Molecular Dynamics.

Stelzl LS, Erlenbach N, Heinz M, Prisner TF, Hummer G.

J Am Chem Soc. 2017 Aug 30;139(34):11674-11677. doi: 10.1021/jacs.7b05363. Epub 2017 Aug 17.

PMID:
28777549
15.

A combined optical and EPR spectroscopy study: azobenzene-based biradicals as reversible molecular photoswitches.

Jaumann EA, Steinwand S, Klenik S, Plackmeyer J, Bats JW, Wachtveitl J, Prisner TF.

Phys Chem Chem Phys. 2017 Jul 14;19(26):17263-17269. doi: 10.1039/c7cp02088k. Epub 2017 Jun 22.

PMID:
28639638
16.

Perspectives of shaped pulses for EPR spectroscopy.

Spindler PE, Schöps P, Kallies W, Glaser SJ, Prisner TF.

J Magn Reson. 2017 Jul;280:30-45. doi: 10.1016/j.jmr.2017.02.023.

PMID:
28579101
17.

Continuous-flow DNP polarizer for MRI applications at 1.5 T.

Denysenkov V, Terekhov M, Maeder R, Fischer S, Zangos S, Vogl T, Prisner TF.

Sci Rep. 2017 Mar 14;7:44010. doi: 10.1038/srep44010.

18.

Noncovalent and site-directed spin labeling of duplex RNA.

Kamble NR, Gränz M, Prisner TF, Sigurdsson ST.

Chem Commun (Camb). 2016 Dec 13;52(100):14442-14445.

PMID:
27901530
19.

RIDME spectroscopy on high-spin Mn2+ centers.

Akhmetzyanov D, Ching HY, Denysenkov V, Demay-Drouhard P, Bertrand HC, Tabares LC, Policar C, Prisner TF, Un S.

Phys Chem Chem Phys. 2016 Nov 9;18(44):30857-30866.

PMID:
27801444
20.

Selective High-Resolution Detection of Membrane Protein-Ligand Interaction in Native Membranes Using Trityl-Nitroxide PELDOR.

Joseph B, Tormyshev VM, Rogozhnikova OY, Akhmetzyanov D, Bagryanskaya EG, Prisner TF.

Angew Chem Int Ed Engl. 2016 Sep 12;55(38):11538-42. doi: 10.1002/anie.201606335. Epub 2016 Aug 11.

PMID:
27511025
21.

Flexibilities of isoindoline-derived spin labels for nucleic acids by orientation selective PELDOR.

Erlenbach N, Endeward B, Schöps P, Gophane DB, Sigurdsson ST, Prisner TF.

Phys Chem Chem Phys. 2016 Jun 28;18(24):16196-201. doi: 10.1039/c6cp02475k. Epub 2016 Jun 2.

PMID:
27251584
22.

Relative Orientation of POTRA Domains from Cyanobacterial Omp85 Studied by Pulsed EPR Spectroscopy.

Dastvan R, Brouwer EM, Schuetz D, Mirus O, Schleiff E, Prisner TF.

Biophys J. 2016 May 24;110(10):2195-206. doi: 10.1016/j.bpj.2016.04.030.

23.

Flexibility and conformation of the cocaine aptamer studied by PELDOR.

Grytz CM, Marko A, Cekan P, Sigurdsson ST, Prisner TF.

Phys Chem Chem Phys. 2016 Jan 28;18(4):2993-3002. doi: 10.1039/c5cp06158j.

PMID:
26740459
24.

Carr-Purcell Pulsed Electron Double Resonance with Shaped Inversion Pulses.

Spindler PE, Waclawska I, Endeward B, Plackmeyer J, Ziegler C, Prisner TF.

J Phys Chem Lett. 2015 Nov 5;6(21):4331-5. doi: 10.1021/acs.jpclett.5b01933. Epub 2015 Oct 19.

PMID:
26538047
25.

Advanced EPR Methods for Studying Conformational Dynamics of Nucleic Acids.

Endeward B, Marko A, Denysenkov VP, Sigurdsson ST, Prisner TF.

Methods Enzymol. 2015;564:403-25. doi: 10.1016/bs.mie.2015.06.007. Epub 2015 Jul 2.

PMID:
26477259
26.

Pulsed EPR dipolar spectroscopy at Q- and G-band on a trityl biradical.

Akhmetzyanov D, Schöps P, Marko A, Kunjir NC, Sigurdsson ST, Prisner TF.

Phys Chem Chem Phys. 2015 Oct 7;17(37):24446-51. doi: 10.1039/c5cp03671b. Epub 2015 Sep 4.

PMID:
26339694
27.

Distance Measurement on an Endogenous Membrane Transporter in E. coli Cells and Native Membranes Using EPR Spectroscopy.

Joseph B, Sikora A, Bordignon E, Jeschke G, Cafiso DS, Prisner TF.

Angew Chem Int Ed Engl. 2015 May 18;54(21):6196-9. doi: 10.1002/anie.201501086. Epub 2015 Mar 31.

28.

Conformational dynamics of nucleic acid molecules studied by PELDOR spectroscopy with rigid spin labels.

Prisner TF, Marko A, Sigurdsson ST.

J Magn Reson. 2015 Mar;252:187-98. doi: 10.1016/j.jmr.2014.12.008. Epub 2015 Jan 20.

PMID:
25701439
29.

Pulsed electron-electron double resonance spectroscopy between a high-spin Mn(2+) ion and a nitroxide spin label.

Akhmetzyanov D, Plackmeyer J, Endeward B, Denysenkov V, Prisner TF.

Phys Chem Chem Phys. 2015 Mar 14;17(10):6760-6. doi: 10.1039/c4cp05362a.

PMID:
25669744
30.

Molecular simulations for dynamic nuclear polarization in liquids: a case study of TEMPOL in acetone and DMSO.

Küçük SE, Neugebauer P, Prisner TF, Sezer D.

Phys Chem Chem Phys. 2015 Mar 7;17(9):6618-28. doi: 10.1039/c4cp05832a.

PMID:
25665728
31.

Broadband spin echoes and broadband SIFTER in EPR.

Schöps P, Spindler PE, Marko A, Prisner TF.

J Magn Reson. 2015 Jan;250:55-62. doi: 10.1016/j.jmr.2014.10.017. Epub 2014 Nov 26.

PMID:
25506814
32.

Sterically shielded spin labels for in-cell EPR spectroscopy: analysis of stability in reducing environment.

Jagtap AP, Krstic I, Kunjir NC, Hänsel R, Prisner TF, Sigurdsson ST.

Free Radic Res. 2015 Jan;49(1):78-85. doi: 10.3109/10715762.2014.979409. Epub 2014 Nov 20.

PMID:
25348344
33.

Dynamic nuclear polarization-enhanced NMR on aligned lipid bilayers at ambient temperature.

Jakdetchai O, Denysenkov V, Becker-Baldus J, Dutagaci B, Prisner TF, Glaubitz C.

J Am Chem Soc. 2014 Nov 5;136(44):15533-6. doi: 10.1021/ja509799s. Epub 2014 Oct 24.

PMID:
25333422
34.

Conformationally restricted isoindoline-derived spin labels in duplex DNA: distances and rotational flexibility by pulsed electron-electron double resonance spectroscopy.

Gophane DB, Endeward B, Prisner TF, Sigurdsson ST.

Chemistry. 2014 Nov 24;20(48):15913-9. doi: 10.1002/chem.201403726. Epub 2014 Oct 8.

PMID:
25296640
35.

High-field liquid state NMR hyperpolarization: a combined DNP/NMRD approach.

Neugebauer P, Krummenacker JG, Denysenkov VP, Helmling C, Luchinat C, Parigi G, Prisner TF.

Phys Chem Chem Phys. 2014 Sep 21;16(35):18781-7. doi: 10.1039/c4cp02451f.

PMID:
25078259
36.

Nucleotides and substrates trigger the dynamics of the Toc34 GTPase homodimer involved in chloroplast preprotein translocation.

Lumme C, Altan-Martin H, Dastvan R, Sommer MS, Oreb M, Schuetz D, Hellenkamp B, Mirus O, Kretschmer J, Lyubenova S, Kügel W, Medelnik JP, Dehmer M, Michaelis J, Prisner TF, Hugel T, Schleiff E.

Structure. 2014 Apr 8;22(4):526-38. doi: 10.1016/j.str.2014.02.004. Epub 2014 Mar 13.

37.

Host-guest complexes as water-soluble high-performance DNP polarizing agents.

Mao J, Akhmetzyanov D, Ouari O, Denysenkov V, Corzilius B, Plackmeyer J, Tordo P, Prisner TF, Glaubitz C.

J Am Chem Soc. 2013 Dec 26;135(51):19275-81. doi: 10.1021/ja409840y. Epub 2013 Dec 13.

PMID:
24279469
38.

Liquid state DNP of water at 9.2 T: an experimental access to saturation.

Neugebauer P, Krummenacker JG, Denysenkov VP, Parigi G, Luchinat C, Prisner TF.

Phys Chem Chem Phys. 2013 Apr 28;15(16):6049-56. doi: 10.1039/c3cp44461a. Epub 2013 Mar 15.

PMID:
23493879
39.

Broadband inversion PELDOR spectroscopy with partially adiabatic shaped pulses.

Spindler PE, Glaser SJ, Skinner TE, Prisner TF.

Angew Chem Int Ed Engl. 2013 Mar 18;52(12):3425-9. doi: 10.1002/anie.201207777. Epub 2013 Feb 19. No abstract available.

PMID:
23424088
40.

An algorithm to analyze PELDOR data of rigid spin label pairs.

Marko A, Prisner TF.

Phys Chem Chem Phys. 2013 Jan 14;15(2):619-27. doi: 10.1039/c2cp42942j. Epub 2012 Nov 26.

PMID:
23183777
41.

Shaped optimal control pulses for increased excitation bandwidth in EPR.

Spindler PE, Zhang Y, Endeward B, Gershernzon N, Skinner TE, Glaser SJ, Prisner TF.

J Magn Reson. 2012 May;218:49-58. doi: 10.1016/j.jmr.2012.02.013. Epub 2012 Mar 9.

PMID:
22578555
42.

Dynamic nuclear polarization at high magnetic fields in liquids.

Griesinger C, Bennati M, Vieth HM, Luchinat C, Parigi G, Höfer P, Engelke F, Glaser SJ, Denysenkov V, Prisner TF.

Prog Nucl Magn Reson Spectrosc. 2012 Jul;64:4-28. doi: 10.1016/j.pnmrs.2011.10.002. Epub 2011 Nov 4. Review. No abstract available.

PMID:
22578315
43.

Probing the ATP hydrolysis cycle of the ABC multidrug transporter LmrA by pulsed EPR spectroscopy.

Hellmich UA, Lyubenova S, Kaltenborn E, Doshi R, van Veen HW, Prisner TF, Glaubitz C.

J Am Chem Soc. 2012 Apr 4;134(13):5857-62. doi: 10.1021/ja211007t. Epub 2012 Mar 21.

PMID:
22397466
44.

DNP in MRI: an in-bore approach at 1.5 T.

Krummenacker JG, Denysenkov VP, Terekhov M, Schreiber LM, Prisner TF.

J Magn Reson. 2012 Feb;215:94-9. doi: 10.1016/j.jmr.2011.12.015. Epub 2011 Dec 30.

PMID:
22248644
45.

Determination of the proton environment of high stability Menasemiquinone intermediate in Escherichia coli nitrate reductase A by pulsed EPR.

Grimaldi S, Arias-Cartin R, Lanciano P, Lyubenova S, Szenes R, Endeward B, Prisner TF, Guigliarelli B, Magalon A.

J Biol Chem. 2012 Feb 10;287(7):4662-70. doi: 10.1074/jbc.M111.325100. Epub 2011 Dec 21.

46.

Structure and dynamics of nucleic acids.

Krstić I, Endeward B, Margraf D, Marko A, Prisner TF.

Top Curr Chem. 2012;321:159-98. doi: 10.1007/128_2011_300. Review.

PMID:
22160388
47.

Conformational flexibility of DNA.

Marko A, Denysenkov V, Margraf D, Cekan P, Schiemann O, Sigurdsson ST, Prisner TF.

J Am Chem Soc. 2011 Aug 31;133(34):13375-9. doi: 10.1021/ja201244u. Epub 2011 Aug 8.

PMID:
21702503
48.

Long-range distance measurements on nucleic acids in cells by pulsed EPR spectroscopy.

Krstić I, Hänsel R, Romainczyk O, Engels JW, Dötsch V, Prisner TF.

Angew Chem Int Ed Engl. 2011 May 23;50(22):5070-4. doi: 10.1002/anie.201100886. Epub 2011 Apr 19. No abstract available.

PMID:
21506223
49.

Pulsed electron-electron double resonance (PELDOR) distance measurements in detergent micelles.

Bode BE, Dastvan R, Prisner TF.

J Magn Reson. 2011 Jul;211(1):11-7. doi: 10.1016/j.jmr.2011.03.014. Epub 2011 Mar 17.

PMID:
21474348
50.

The RNA-DNA hybrid structure determined by EPR, CD and RNase H1.

Romainczyk O, Endeward B, Prisner TF, Engels JW.

Mol Biosyst. 2011 Apr;7(4):1050-2. doi: 10.1039/c0mb00258e. Epub 2011 Feb 19.

PMID:
21336379

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