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Items: 15

1.

Assignment of virus and antimicrobial resistance genes to microbial hosts in a complex microbial community by combined long-read assembly and proximity ligation.

Bickhart DM, Watson M, Koren S, Panke-Buisse K, Cersosimo LM, Press MO, Van Tassell CP, Van Kessel JAS, Haley BJ, Kim SW, Heiner C, Suen G, Bakshy K, Liachko I, Sullivan ST, Myer PR, Ghurye J, Pop M, Weimer PJ, Phillippy AM, Smith TPL.

Genome Biol. 2019 Aug 2;20(1):153. doi: 10.1186/s13059-019-1760-x.

2.

Linking the resistome and plasmidome to the microbiome.

Stalder T, Press MO, Sullivan S, Liachko I, Top EM.

ISME J. 2019 May 30. doi: 10.1038/s41396-019-0446-4. [Epub ahead of print]

PMID:
31147603
3.

Substitutions Are Boring: Some Arguments about Parallel Mutations and High Mutation Rates.

Press MO, Hall AN, Morton EA, Queitsch C.

Trends Genet. 2019 Apr;35(4):253-264. doi: 10.1016/j.tig.2019.01.002. Epub 2019 Feb 20. Review.

PMID:
30797597
4.

Massive variation of short tandem repeats with functional consequences across strains of Arabidopsis thaliana.

Press MO, McCoy RC, Hall AN, Akey JM, Queitsch C.

Genome Res. 2018 Aug;28(8):1169-1178. doi: 10.1101/gr.231753.117. Epub 2018 Jul 3.

5.

Assembly of 913 microbial genomes from metagenomic sequencing of the cow rumen.

Stewart RD, Auffret MD, Warr A, Wiser AH, Press MO, Langford KW, Liachko I, Snelling TJ, Dewhurst RJ, Walker AW, Roehe R, Watson M.

Nat Commun. 2018 Feb 28;9(1):870. doi: 10.1038/s41467-018-03317-6.

6.

Variability in a Short Tandem Repeat Mediates Complex Epistatic Interactions in Arabidopsis thaliana.

Press MO, Queitsch C.

Genetics. 2017 Jan;205(1):455-464. doi: 10.1534/genetics.116.193359. Epub 2016 Nov 18.

7.

PIF4 and ELF3 Act Independently in Arabidopsis thaliana Thermoresponsive Flowering.

Press MO, Lanctot A, Queitsch C.

PLoS One. 2016 Aug 26;11(8):e0161791. doi: 10.1371/journal.pone.0161791. eCollection 2016.

8.

Evolutionary assembly patterns of prokaryotic genomes.

Press MO, Queitsch C, Borenstein E.

Genome Res. 2016 Jun;26(6):826-33. doi: 10.1101/gr.200097.115. Epub 2016 Apr 14.

9.

Corrigendum: MIPSTR: a method for multiplex genotyping of germline and somatic STR variation across many individuals.

Carlson KD, Sudmant PH, Press MO, Eichler EE, Shendure J, Queitsch C.

Genome Res. 2015 Aug;25(8):1244. No abstract available.

10.

MIPSTR: a method for multiplex genotyping of germline and somatic STR variation across many individuals.

Carlson KD, Sudmant PH, Press MO, Eichler EE, Shendure J, Queitsch C.

Genome Res. 2015 May;25(5):750-61. doi: 10.1101/gr.182212.114. Epub 2015 Feb 6. Erratum in: Genome Res. 2015 Aug;25(8):1244.

11.

The overdue promise of short tandem repeat variation for heritability.

Press MO, Carlson KD, Queitsch C.

Trends Genet. 2014 Nov;30(11):504-12. doi: 10.1016/j.tig.2014.07.008. Epub 2014 Aug 30. Review.

12.

The conserved PFT1 tandem repeat is crucial for proper flowering in Arabidopsis thaliana.

Rival P, Press MO, Bale J, Grancharova T, Undurraga SF, Queitsch C.

Genetics. 2014 Oct;198(2):747-54. doi: 10.1534/genetics.114.167866. Epub 2014 Aug 12.

13.

Genome-scale co-evolutionary inference identifies functions and clients of bacterial Hsp90.

Press MO, Li H, Creanza N, Kramer G, Queitsch C, Sourjik V, Borenstein E.

PLoS Genet. 2013;9(7):e1003631. doi: 10.1371/journal.pgen.1003631. Epub 2013 Jul 11.

14.

Background-dependent effects of polyglutamine variation in the Arabidopsis thaliana gene ELF3.

Undurraga SF, Press MO, Legendre M, Bujdoso N, Bale J, Wang H, Davis SJ, Verstrepen KJ, Queitsch C.

Proc Natl Acad Sci U S A. 2012 Nov 20;109(47):19363-7. doi: 10.1073/pnas.1211021109. Epub 2012 Nov 5.

15.

An E3 ubiquitin ligase prevents ectopic localization of the centromeric histone H3 variant via the centromere targeting domain.

Ranjitkar P, Press MO, Yi X, Baker R, MacCoss MJ, Biggins S.

Mol Cell. 2010 Nov 12;40(3):455-64. doi: 10.1016/j.molcel.2010.09.025.

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