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Items: 1 to 50 of 106

1.

Functional interplay between DEAD-box RNA helicases Ded1 and Dbp1 in preinitiation complex attachment and scanning on structured mRNAs in vivo.

Sen ND, Gupta N, K Archer S, Preiss T, Lorsch JR, Hinnebusch AG.

Nucleic Acids Res. 2019 Jul 12. pii: gkz595. doi: 10.1093/nar/gkz595. [Epub ahead of print]

PMID:
31299079
2.

Insights into the biogenesis and potential functions of exonic circular RNA.

Ragan C, Goodall GJ, Shirokikh NE, Preiss T.

Sci Rep. 2019 Feb 14;9(1):2048. doi: 10.1038/s41598-018-37037-0.

3.

Regulating RNA Research and CRISPR Gene Drives to Combat Biosecurity Threats.

Faunce T, Ray A, Gardiner C, Preiss T, Burgio G.

J Law Med. 2018 Oct;26(1):208-213.

PMID:
30302983
4.

Translation initiation by cap-dependent ribosome recruitment: Recent insights and open questions.

Shirokikh NE, Preiss T.

Wiley Interdiscip Rev RNA. 2018 Jul;9(4):e1473. doi: 10.1002/wrna.1473. Epub 2018 Apr 6. Review.

PMID:
29624880
5.

Diversity of transcripts emanating from protein-coding genes.

Rasko JEJ, Preiss T.

Semin Cell Dev Biol. 2018 Mar;75:1-2. doi: 10.1016/j.semcdb.2018.01.011. Epub 2018 Feb 1. No abstract available.

PMID:
29391207
6.

A brave new world of RNA-binding proteins.

Hentze MW, Castello A, Schwarzl T, Preiss T.

Nat Rev Mol Cell Biol. 2018 May;19(5):327-341. doi: 10.1038/nrm.2017.130. Epub 2018 Jan 17. Review.

PMID:
29339797
7.

Kinetic Analysis of the Uptake and Release of Fluorescein by Metal-Organic Framework Nanoparticles.

Preiß T, Zimpel A, Wuttke S, Rädler JO.

Materials (Basel). 2017 Feb 22;10(2). pii: E216. doi: 10.3390/ma10020216.

8.

Translation complex profile sequencing to study the in vivo dynamics of mRNA-ribosome interactions during translation initiation, elongation and termination.

Shirokikh NE, Archer SK, Beilharz TH, Powell D, Preiss T.

Nat Protoc. 2017 Apr;12(4):697-731. doi: 10.1038/nprot.2016.189. Epub 2017 Mar 2.

PMID:
28253237
9.

Multifunctional Nanoparticles by Coordinative Self-Assembly of His-Tagged Units with Metal-Organic Frameworks.

Röder R, Preiß T, Hirschle P, Steinborn B, Zimpel A, Höhn M, Rädler JO, Bein T, Wagner E, Wuttke S, Lächelt U.

J Am Chem Soc. 2017 Feb 15;139(6):2359-2368. doi: 10.1021/jacs.6b11934. Epub 2017 Feb 6.

PMID:
28075125
10.

Transcriptome-Wide Mapping of RNA 5-Methylcytosine in Arabidopsis mRNAs and Noncoding RNAs.

David R, Burgess A, Parker B, Li J, Pulsford K, Sibbritt T, Preiss T, Searle IR.

Plant Cell. 2017 Mar;29(3):445-460. doi: 10.1105/tpc.16.00751. Epub 2017 Jan 6.

11.

Intracellular Delivery of Nanobodies for Imaging of Target Proteins in Live Cells.

Röder R, Helma J, Preiß T, Rädler JO, Leonhardt H, Wagner E.

Pharm Res. 2017 Jan;34(1):161-174. doi: 10.1007/s11095-016-2052-8. Epub 2016 Oct 31.

PMID:
27800572
12.

In Planta Determination of the mRNA-Binding Proteome of Arabidopsis Etiolated Seedlings.

Reichel M, Liao Y, Rettel M, Ragan C, Evers M, Alleaume AM, Horos R, Hentze MW, Preiss T, Millar AA.

Plant Cell. 2016 Oct;28(10):2435-2452. Epub 2016 Oct 11.

13.

The Cardiomyocyte RNA-Binding Proteome: Links to Intermediary Metabolism and Heart Disease.

Liao Y, Castello A, Fischer B, Leicht S, Föehr S, Frese CK, Ragan C, Kurscheid S, Pagler E, Yang H, Krijgsveld J, Hentze MW, Preiss T.

Cell Rep. 2016 Aug 2;16(5):1456-1469. doi: 10.1016/j.celrep.2016.06.084. Epub 2016 Jul 21.

14.

Dynamics of ribosome scanning and recycling revealed by translation complex profiling.

Archer SK, Shirokikh NE, Beilharz TH, Preiss T.

Nature. 2016 Jul 28;535(7613):570-4. Epub 2016 Jul 20.

PMID:
27437580
15.

Short interfering RNA induced generation and translation of stable 5' mRNA cleavage intermediates.

Singhania R, Pavey S, Payne E, Gu W, Clancy J, Jubair L, Preiss T, Saunders N, McMillan NA.

Biochim Biophys Acta. 2016 Aug;1859(8):1034-42. doi: 10.1016/j.bbagrm.2016.06.005. Epub 2016 Jun 16.

PMID:
27321990
16.

Identification of RNA-binding Proteins in Macrophages by Interactome Capture.

Liepelt A, Naarmann-de Vries IS, Simons N, Eichelbaum K, Föhr S, Archer SK, Castello A, Usadel B, Krijgsveld J, Preiss T, Marx G, Hentze MW, Ostareck DH, Ostareck-Lederer A.

Mol Cell Proteomics. 2016 Aug;15(8):2699-714. doi: 10.1074/mcp.M115.056564. Epub 2016 Jun 8.

17.

METTL3 Gains R/W Access to the Epitranscriptome.

Schumann U, Shafik A, Preiss T.

Mol Cell. 2016 May 5;62(3):323-324. doi: 10.1016/j.molcel.2016.04.024.

18.

Role of miRNAs and alternative mRNA 3'-end cleavage and polyadenylation of their mRNA targets in cardiomyocyte hypertrophy.

Soetanto R, Hynes CJ, Patel HR, Humphreys DT, Evers M, Duan G, Parker BJ, Archer SK, Clancy JL, Graham RM, Beilharz TH, Smith NJ, Preiss T.

Biochim Biophys Acta. 2016 May;1859(5):744-56. doi: 10.1016/j.bbagrm.2016.03.010. Epub 2016 Mar 24.

PMID:
27032571
19.

Embryonic Stem Cells Exhibit mRNA Isoform Specific Translational Regulation.

Wong QW, Vaz C, Lee QY, Zhao TY, Luo R, Archer SK, Preiss T, Tanavde V, Vardy LA.

PLoS One. 2016 Jan 22;11(1):e0143235. doi: 10.1371/journal.pone.0143235. eCollection 2016.

20.

All Ribosomes Are Created Equal. Really?

Preiss T.

Trends Biochem Sci. 2016 Feb;41(2):121-123. doi: 10.1016/j.tibs.2015.11.009. Epub 2015 Dec 9.

PMID:
26682497
21.

pH-Reversible Cationic RNase A Conjugates for Enhanced Cellular Delivery and Tumor Cell Killing.

Liu X, Zhang P, He D, Rödl W, Preiß T, Rädler JO, Wagner E, Lächelt U.

Biomacromolecules. 2016 Jan 11;17(1):173-82. doi: 10.1021/acs.biomac.5b01289. Epub 2015 Dec 23.

PMID:
26652751
22.

The emerging epitranscriptomics of long noncoding RNAs.

Shafik A, Schumann U, Evers M, Sibbritt T, Preiss T.

Biochim Biophys Acta. 2016 Jan;1859(1):59-70. doi: 10.1016/j.bbagrm.2015.10.019. Epub 2015 Nov 2. Review.

PMID:
26541084
23.

Metabolic Enzymes Enjoying New Partnerships as RNA-Binding Proteins.

Castello A, Hentze MW, Preiss T.

Trends Endocrinol Metab. 2015 Dec;26(12):746-757. doi: 10.1016/j.tem.2015.09.012. Epub 2015 Oct 28. Review.

24.

Nucleotide-Level Profiling of m⁵C RNA Methylation.

Sibbritt T, Shafik A, Clark SJ, Preiss T.

Methods Mol Biol. 2016;1358:269-84. doi: 10.1007/978-1-4939-3067-8_16.

PMID:
26463389
25.

MOF nanoparticles coated by lipid bilayers and their uptake by cancer cells.

Wuttke S, Braig S, Preiß T, Zimpel A, Sicklinger J, Bellomo C, Rädler JO, Vollmar AM, Bein T.

Chem Commun (Camb). 2015 Nov 11;51(87):15752-5. doi: 10.1039/c5cc06767g.

PMID:
26359316
26.

PAT-seq: a method to study the integration of 3'-UTR dynamics with gene expression in the eukaryotic transcriptome.

Harrison PF, Powell DR, Clancy JL, Preiss T, Boag PR, Traven A, Seemann T, Beilharz TH.

RNA. 2015 Aug;21(8):1502-10. doi: 10.1261/rna.048355.114. Epub 2015 Jun 19.

27.

Corrigendum: Divergent reprogramming routes lead to alternative stem-cell states.

Tonge PD, Corso AJ, Monetti C, Hussein SM, Puri MC, Michael IP, Li M, Lee DS, Mar JC, Cloonan N, Wood DL, Gauthier ME, Korn O, Clancy JL, Preiss T, Grimmond SM, Shin JY, Seo JS, Wells CA, Rogers IM, Nagy A.

Nature. 2015 Jul 30;523(7562):626. doi: 10.1038/nature14607. Epub 2015 Jun 17. No abstract available.

PMID:
26083751
28.

Corrigendum: Genome-wide characterization of the routes to pluripotency.

Hussein SM, Puri MC, Tonge PD, Benevento M, Corso AJ, Clancy JL, Mosbergen R, Li M, Lee DS, Cloonan N, Wood DL, Munoz J, Middleton R, Korn O, Patel HR, White CA, Shin JY, Gauthier ME, Cao KA, Kim JI, Mar JC, Shakiba N, Ritchie W, Rasko JE, Grimmond SM, Zandstra PW, Wells CA, Preiss T, Seo JS, Heck AJ, Rogers IM, Nagy A.

Nature. 2015 Jul 30;523(7562):626. doi: 10.1038/nature14606. Epub 2015 Jun 17. No abstract available.

PMID:
26083747
29.

Probe-Directed Degradation (PDD) for Flexible Removal of Unwanted cDNA Sequences from RNA-Seq Libraries.

Archer SK, Shirokikh NE, Preiss T.

Curr Protoc Hum Genet. 2015 Apr 1;85:11.15.1-36. doi: 10.1002/0471142905.hg1115s85.

PMID:
25827346
30.

Probing the closed-loop model of mRNA translation in living cells.

Archer SK, Shirokikh NE, Hallwirth CV, Beilharz TH, Preiss T.

RNA Biol. 2015;12(3):248-54. doi: 10.1080/15476286.2015.1017242.

31.

EGF-mediated induction of Mcl-1 at the switch to lactation is essential for alveolar cell survival.

Fu NY, Rios AC, Pal B, Soetanto R, Lun AT, Liu K, Beck T, Best SA, Vaillant F, Bouillet P, Strasser A, Preiss T, Smyth GK, Lindeman GJ, Visvader JE.

Nat Cell Biol. 2015 Apr;17(4):365-75. doi: 10.1038/ncb3117. Epub 2015 Mar 2.

PMID:
25730472
32.

Roquin binds microRNA-146a and Argonaute2 to regulate microRNA homeostasis.

Srivastava M, Duan G, Kershaw NJ, Athanasopoulos V, Yeo JH, Ose T, Hu D, Brown SH, Jergic S, Patel HR, Pratama A, Richards S, Verma A, Jones EY, Heissmeyer V, Preiss T, Dixon NE, Chong MM, Babon JJ, Vinuesa CG.

Nat Commun. 2015 Feb 20;6:6253. doi: 10.1038/ncomms7253.

33.

Genome-wide characterization of the routes to pluripotency.

Hussein SM, Puri MC, Tonge PD, Benevento M, Corso AJ, Clancy JL, Mosbergen R, Li M, Lee DS, Cloonan N, Wood DL, Munoz J, Middleton R, Korn O, Patel HR, White CA, Shin JY, Gauthier ME, Lê Cao KA, Kim JI, Mar JC, Shakiba N, Ritchie W, Rasko JE, Grimmond SM, Zandstra PW, Wells CA, Preiss T, Seo JS, Heck AJ, Rogers IM, Nagy A.

Nature. 2014 Dec 11;516(7530):198-206. doi: 10.1038/nature14046. Erratum in: Nature. 2015 Jul 30;523(7562):626.

PMID:
25503233
34.

Divergent reprogramming routes lead to alternative stem-cell states.

Tonge PD, Corso AJ, Monetti C, Hussein SM, Puri MC, Michael IP, Li M, Lee DS, Mar JC, Cloonan N, Wood DL, Gauthier ME, Korn O, Clancy JL, Preiss T, Grimmond SM, Shin JY, Seo JS, Wells CA, Rogers IM, Nagy A.

Nature. 2014 Dec 11;516(7530):192-7. doi: 10.1038/nature14047. Erratum in: Nature. 2015 Jul 30;523(7562):626.

PMID:
25503232
35.

Small RNA changes en route to distinct cellular states of induced pluripotency.

Clancy JL, Patel HR, Hussein SM, Tonge PD, Cloonan N, Corso AJ, Li M, Lee DS, Shin JY, Wong JJ, Bailey CG, Benevento M, Munoz J, Chuah A, Wood D, Rasko JE, Heck AJ, Grimmond SM, Rogers IM, Seo JS, Wells CA, Puri MC, Nagy A, Preiss T.

Nat Commun. 2014 Dec 10;5:5522. doi: 10.1038/ncomms6522.

PMID:
25494340
36.

An epigenomic roadmap to induced pluripotency reveals DNA methylation as a reprogramming modulator.

Lee DS, Shin JY, Tonge PD, Puri MC, Lee S, Park H, Lee WC, Hussein SM, Bleazard T, Yun JY, Kim J, Li M, Cloonan N, Wood D, Clancy JL, Mosbergen R, Yi JH, Yang KS, Kim H, Rhee H, Wells CA, Preiss T, Grimmond SM, Rogers IM, Nagy A, Seo JS.

Nat Commun. 2014 Dec 10;5:5619. doi: 10.1038/ncomms6619.

37.

The human Piwi protein Hiwi2 associates with tRNA-derived piRNAs in somatic cells.

Keam SP, Young PE, McCorkindale AL, Dang TH, Clancy JL, Humphreys DT, Preiss T, Hutvagner G, Martin DI, Cropley JE, Suter CM.

Nucleic Acids Res. 2014 Aug;42(14):8984-95. doi: 10.1093/nar/gku620. Epub 2014 Jul 18.

38.

Inflammation: gone with translation.

Vinuesa CG, Preiss T.

PLoS Genet. 2014 Jun 19;10(6):e1004442. doi: 10.1371/journal.pgen.1004442. eCollection 2014 Jun. No abstract available.

39.

Selective and flexible depletion of problematic sequences from RNA-seq libraries at the cDNA stage.

Archer SK, Shirokikh NE, Preiss T.

BMC Genomics. 2014 May 26;15:401. doi: 10.1186/1471-2164-15-401.

40.

G-quadruplexes regulate Epstein-Barr virus-encoded nuclear antigen 1 mRNA translation.

Murat P, Zhong J, Lekieffre L, Cowieson NP, Clancy JL, Preiss T, Balasubramanian S, Khanna R, Tellam J.

Nat Chem Biol. 2014 May;10(5):358-64. doi: 10.1038/nchembio.1479. Epub 2014 Mar 16.

41.

Genetic variation in the two-pore domain potassium channel, TASK-1, may contribute to an atrial substrate for arrhythmogenesis.

Liang B, Soka M, Christensen AH, Olesen MS, Larsen AP, Knop FK, Wang F, Nielsen JB, Andersen MN, Humphreys D, Mann SA, Huttner IG, Vandenberg JI, Svendsen JH, Haunsø S, Preiss T, Seebohm G, Olesen SP, Schmitt N, Fatkin D.

J Mol Cell Cardiol. 2014 Feb;67:69-76. doi: 10.1016/j.yjmcc.2013.12.014. Epub 2013 Dec 27.

PMID:
24374141
42.

Yeast hEST1A/B (SMG5/6)-like proteins contribute to environment-sensing adaptive gene expression responses.

Lai X, Beilharz T, Au WC, Hammet A, Preiss T, Basrai MA, Heierhorst J.

G3 (Bethesda). 2013 Oct 3;3(10):1649-59. doi: 10.1534/g3.113.006924.

43.

Maternal obesity and diabetes induces latent metabolic defects and widespread epigenetic changes in isogenic mice.

Li CC, Young PE, Maloney CA, Eaton SA, Cowley MJ, Buckland ME, Preiss T, Henstridge DC, Cooney GJ, Febbraio MA, Martin DI, Cropley JE, Suter CM.

Epigenetics. 2013 Jun;8(6):602-11. doi: 10.4161/epi.24656. Epub 2013 Apr 26.

44.

Mapping and significance of the mRNA methylome.

Sibbritt T, Patel HR, Preiss T.

Wiley Interdiscip Rev RNA. 2013 Jul-Aug;4(4):397-422. doi: 10.1002/wrna.1166. Epub 2013 May 16. Review.

PMID:
23681756
45.

A heterozygous variant in the human cardiac miR-133 gene, MIR133A2, alters miRNA duplex processing and strand abundance.

Ohanian M, Humphreys DT, Anderson E, Preiss T, Fatkin D.

BMC Genet. 2013 Mar 6;14:18. doi: 10.1186/1471-2156-14-18.

46.

Circular RNAs: splicing's enigma variations.

Hentze MW, Preiss T.

EMBO J. 2013 Apr 3;32(7):923-5. doi: 10.1038/emboj.2013.53. Epub 2013 Mar 5. Review. No abstract available.

47.

RNA-binding proteins in Mendelian disease.

Castello A, Fischer B, Hentze MW, Preiss T.

Trends Genet. 2013 May;29(5):318-27. doi: 10.1016/j.tig.2013.01.004. Epub 2013 Feb 15. Review.

PMID:
23415593
48.

miRNAs in cardiac disease: sitting duck or moving target?

Hynes CJ, Clancy JL, Preiss T.

IUBMB Life. 2012 Nov;64(11):872-8. doi: 10.1002/iub.1082. Epub 2012 Sep 26. Review.

49.

From cis-regulatory elements to complex RNPs and back.

Gebauer F, Preiss T, Hentze MW.

Cold Spring Harb Perspect Biol. 2012 Jul 1;4(7):a012245. doi: 10.1101/cshperspect.a012245.

50.

On the Diversification of the Translation Apparatus across Eukaryotes.

Hernández G, Proud CG, Preiss T, Parsyan A.

Comp Funct Genomics. 2012;2012:256848. doi: 10.1155/2012/256848. Epub 2012 May 14.

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