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Items: 16

1.

Whole‑exome sequencing in Russian children with non‑type 1 diabetes mellitus reveals a wide spectrum of genetic variants in MODY‑related and unrelated genes.

Glotov OS, Serebryakova EA, Turkunova ME, Efimova OA, Glotov AS, Barbitoff YA, Nasykhova YA, Predeus AV, Polev DE, Fedyakov MA, Polyakova IV, Ivashchenko TE, Shved NY, Shabanova ES, Tiselko AV, Romanova OV, Sarana AM, Pendina AA, Scherbak SG, Musina EV, Petrovskaia-Kaminskaia AV, Lonishin LR, Ditkovskaya LV, Zhelenina LА, Tyrtova LV, Berseneva OS, Skitchenko RK, Suspitsin EN, Bashnina EB, Baranov VS.

Mol Med Rep. 2019 Dec;20(6):4905-4914. doi: 10.3892/mmr.2019.10751. Epub 2019 Oct 16.

2.

Whole-exome sequencing provides insights into monogenic disease prevalence in Northwest Russia.

Barbitoff YA, Skitchenko RK, Poleshchuk OI, Shikov AE, Serebryakova EA, Nasykhova YA, Polev DE, Shuvalova AR, Shcherbakova IV, Fedyakov MA, Glotov OS, Glotov AS, Predeus AV.

Mol Genet Genomic Med. 2019 Nov;7(11):e964. doi: 10.1002/mgg3.964. Epub 2019 Sep 3.

3.

Adding function to the genome of African Salmonella Typhimurium ST313 strain D23580.

Canals R, Hammarlöf DL, Kröger C, Owen SV, Fong WY, Lacharme-Lora L, Zhu X, Wenner N, Carden SE, Honeycutt J, Monack DM, Kingsley RA, Brownridge P, Chaudhuri RR, Rowe WPM, Predeus AV, Hokamp K, Gordon MA, Hinton JCD.

PLoS Biol. 2019 Jan 15;17(1):e3000059. doi: 10.1371/journal.pbio.3000059. eCollection 2019 Jan.

4.

Identification of Novel Candidate Markers of Type 2 Diabetes and Obesity in Russia by Exome Sequencing with a Limited Sample Size.

Barbitoff YA, Serebryakova EA, Nasykhova YA, Predeus AV, Polev DE, Shuvalova AR, Vasiliev EV, Urazov SP, Sarana AM, Scherbak SG, Gladyshev DV, Pokrovskaya MS, Sivakova OV, Meshkov AN, Drapkina OM, Glotov OS, Glotov AS.

Genes (Basel). 2018 Aug 17;9(8). pii: E415. doi: 10.3390/genes9080415.

5.

Catching hidden variation: systematic correction of reference minor allele annotation in clinical variant calling.

Barbitoff YA, Bezdvornykh IV, Polev DE, Serebryakova EA, Glotov AS, Glotov OS, Predeus AV.

Genet Med. 2018 Mar;20(3):360-364. doi: 10.1038/gim.2017.168. Epub 2017 Oct 26.

PMID:
29155419
6.

Long-Range Signaling in MutS and MSH Homologs via Switching of Dynamic Communication Pathways.

Wang B, Francis J, Sharma M, Law SM, Predeus AV, Feig M.

PLoS Comput Biol. 2016 Oct 21;12(10):e1005159. doi: 10.1371/journal.pcbi.1005159. eCollection 2016 Oct.

7.

Differential mismatch recognition specificities of eukaryotic MutS homologs, MutSα and MutSβ.

Sharma M, Predeus AV, Kovacs N, Feig M.

Biophys J. 2014 Jun 3;106(11):2483-92. doi: 10.1016/j.bpj.2014.04.026.

8.

Targeted chromatin profiling reveals novel enhancers in Ig H and Ig L chain Loci.

Predeus AV, Gopalakrishnan S, Huang Y, Tang J, Feeney AJ, Oltz EM, Artyomov MN.

J Immunol. 2014 Feb 1;192(3):1064-70. doi: 10.4049/jimmunol.1302800. Epub 2013 Dec 18.

9.

Energetic and structural details of the trigger-loop closing transition in RNA polymerase II.

Wang B, Predeus AV, Burton ZF, Feig M.

Biophys J. 2013 Aug 6;105(3):767-75. doi: 10.1016/j.bpj.2013.05.060.

10.

DNA bending propensity in the presence of base mismatches: implications for DNA repair.

Sharma M, Predeus AV, Mukherjee S, Feig M.

J Phys Chem B. 2013 May 23;117(20):6194-205. doi: 10.1021/jp403127a. Epub 2013 May 10.

11.

Synthesis of [m.n]cyclophanes: regiochemistry transfer from vinyl halides to cyclophanes via Fischer carbene complexes.

Wang H, Predeus AV, Wulff WD.

Chemistry. 2013 Jun 17;19(25):8261-7. doi: 10.1002/chem.201204434. Epub 2013 Apr 15.

PMID:
23589084
12.

Rational synthesis for all all-homocalixarenes.

Predeus AV, Gopalsamuthiram V, Staples RJ, Wulff WD.

Angew Chem Int Ed Engl. 2013 Jan 14;52(3):911-5. doi: 10.1002/anie.201206785. Epub 2012 Nov 26. No abstract available.

PMID:
23184328
13.

Conformational sampling of peptides in the presence of protein crowders from AA/CG-multiscale simulations.

Predeus AV, Gul S, Gopal SM, Feig M.

J Phys Chem B. 2012 Jul 26;116(29):8610-20. doi: 10.1021/jp300129u. Epub 2012 Apr 5.

14.

Optically active calixarenes conduced by methylene substitution.

Gopalsamuthiram V, Predeus AV, Huang RH, Wulff WD.

J Am Chem Soc. 2009 Dec 23;131(50):18018-9. doi: 10.1021/ja905990u. Erratum in: J Am Chem Soc. 2010 Nov 17;132(45):16296.

PMID:
19928964
15.

Regulation of orthogonal functions in a dual catalyst system. Subservient role of a nonchiral Lewis acid in an asymmetric catalytic heteroatom Diels-Alder reaction.

Newman CA, Antilla JC, Chen P, Predeus AV, Fielding L, Wulff WD.

J Am Chem Soc. 2007 Jun 13;129(23):7216-7. Epub 2007 May 16. No abstract available.

16.

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