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Hepatitis C Co-infection and Mortality in People Living with HIV in Middle Tennessee.

Hall T, Jenkins CA, Hulgan T, Furukawa SS, Turner M, Pratap S, Sterling TR, Tabatabai M, Berthaud V.

AIDS Res Hum Retroviruses. 2019 Dec 1. doi: 10.1089/AID.2019.0113. [Epub ahead of print]


Proteomics profiling of autologous blood and semen exosomes from HIV-infected and uninfected individuals reveals compositional and functional variabilities.

Kaddour H, Lyu Y, Welch JL, Paromov V, Mandape SN, Sakhare SS, Pandhare J, Stapleton JT, Pratap S, Dash C, Okeoma CM.

Mol Cell Proteomics. 2019 Nov 1. pii: mcp.RA119.001594. doi: 10.1074/mcp.RA119.001594. [Epub ahead of print]


Erratum for Tripathi et al., "The Cross Talk between TbTim50 and PIP39, Two Aspartate-Based Protein Phosphatases, Maintains Cellular Homeostasis in Trypanosoma brucei".

Tripathi A, Singha UK, Paromov V, Hill S, Pratap S, Rose K, Chaudhuri M.

mSphere. 2019 Sep 4;4(5). pii: e00607-19. doi: 10.1128/mSphere.00607-19. No abstract available.


The Cross Talk between TbTim50 and PIP39, Two Aspartate-Based Protein Phosphatases, Maintains Cellular Homeostasis in Trypanosoma brucei.

Tripathi A, Singha UK, Paromov V, Hill S, Pratap S, Rose K, Chaudhuri M.

mSphere. 2019 Aug 7;4(4). pii: e00353-19. doi: 10.1128/mSphere.00353-19. Erratum in: mSphere. 2019 Sep 4;4(5):.


Emergence of lead halide perovskite colloidal dispersions through aggregation and fragmentation: insights from the nanoscale to the mesoscale.

Pratap S, Keller E, Müller-Buschbaum P.

Nanoscale. 2019 Feb 21;11(8):3495-3499. doi: 10.1039/c8nr09853k.


Identification of Specific Oral and Gut Pathogens in Full Thickness Colon of Colitis Patients: Implications for Colon Motility.

Dinakaran V, Mandape SN, Shuba K, Pratap S, Sakhare SS, Tabatabai MA, Smoot DT, Farmer-Dixon CM, Kesavalu LN, Adunyah SE, Southerland JH, Gangula PR.

Front Microbiol. 2019 Jan 4;9:3220. doi: 10.3389/fmicb.2018.03220. eCollection 2018.


Anti-proliferative and anti-malarial activities of spiroisoxazoline analogues of artemisinin.

Pratap S, Naaz F, Reddy S, Jha KK, Sharma K, Sahal D, Akhter M, Nayakanti D, Kumar HMS, Kumari V, Pandey K, Shafi S.

Arch Pharm (Weinheim). 2018 Dec 10:e1800192. doi: 10.1002/ardp.201800192. [Epub ahead of print]


A SUMOylation-dependent switch of RAB7 governs intracellular life and pathogenesis of Salmonella Typhimurium.

Mohapatra G, Gaur P, Mujagond P, Singh M, Rana S, Pratap S, Kaur N, Verma S, Krishnan V, Singh N, Srikanth CV.

J Cell Sci. 2019 Jan 11;132(1). pii: jcs222612. doi: 10.1242/jcs.222612.


Molecular and cellular genetics of non-Hodgkin lymphoma: Diagnostic and prognostic implications.

Pratap S, Scordino TS.

Exp Mol Pathol. 2019 Feb;106:44-51. doi: 10.1016/j.yexmp.2018.11.008. Epub 2018 Nov 19. Review.


Long Live Neutrophil.

Pratap S.

JAMA Oncol. 2018 Nov 1;4(11):1626. doi: 10.1001/jamaoncol.2018.4497. No abstract available.


Biochemical and biophysical characterization of 1,4-naphthoquinone as a dual inhibitor of two key enzymes of type II fatty acid biosynthesis from Moraxella catarrhalis.

Kumar V, Sharma A, Pratap S, Kumar P.

Biochim Biophys Acta Proteins Proteom. 2018 Nov;1866(11):1131-1142. doi: 10.1016/j.bbapap.2018.08.008. Epub 2018 Aug 27.


Bent conformation of a backbone pilin N-terminal domain supports a three-stage pilus assembly mechanism.

Chaurasia P, Pratap S, Palva A, von Ossowski I, Krishnan V.

Commun Biol. 2018 Jul 17;1:94. doi: 10.1038/s42003-018-0100-0. eCollection 2018.


Phospho-proteomic analysis of primary human colon epithelial cells during the early Trypanosoma cruzi infection phase.

Suman S, Rachakonda G, Mandape SN, Sakhare SS, Villalta F, Pratap S, Lima MF, Nde PN.

PLoS Negl Trop Dis. 2018 Sep 17;12(9):e0006792. doi: 10.1371/journal.pntd.0006792. eCollection 2018 Sep.


Retrospective audit of 957 consecutive 18F-FDG PET-CT scans compared to CT and MRI in 493 patients with different histological subtypes of bone and soft tissue sarcoma.

Macpherson RE, Pratap S, Tyrrell H, Khonsari M, Wilson S, Gibbons M, Whitwell D, Giele H, Critchley P, Cogswell L, Trent S, Athanasou N, Bradley KM, Hassan AB.

Clin Sarcoma Res. 2018 Apr 9;8:9. doi: 10.1186/s13569-018-0095-9. eCollection 2018.


Organocatalytic, Chemoselective Hydrophosphenylation/oxa-Michael Addition Cascade toward Diastereo- and Enantioenriched 1,3-Dihydroisobenzofuryl Phosphonates.

Hazra G, Pratap S, Ghorai P.

J Org Chem. 2018 Sep 7;83(17):9654-9666. doi: 10.1021/acs.joc.8b01048. Epub 2018 Aug 22.


The inhibitory and binding studies of methyl-sulfone hydroxamate based inhibitors against LpxC from drug resistant Moraxella catarrhalis using biophysical, biochemical and in silico approaches.

Sharma A, Kumar V, Pratap S, Kumar P.

Int J Biol Macromol. 2018 Oct 15;118(Pt B):1747-1762. doi: 10.1016/j.ijbiomac.2018.07.025. Epub 2018 Jul 12.


Crystal structure of chikungunya virus nsP2 cysteine protease reveals a putative flexible loop blocking its active site.

Narwal M, Singh H, Pratap S, Malik A, Kuhn RJ, Kumar P, Tomar S.

Int J Biol Macromol. 2018 Sep;116:451-462. doi: 10.1016/j.ijbiomac.2018.05.007. Epub 2018 May 4.


Biophysical and in silico interaction studies of aporphine alkaloids with Malonyl-CoA: ACP transacylase (FabD) from drug resistant Moraxella catarrhalis.

Kumar V, Sharma A, Pratap S, Kumar P.

Biochimie. 2018 Jun;149:18-33. doi: 10.1016/j.biochi.2018.03.012. Epub 2018 Mar 29.


Pleomorphic liposarcoma of bone: a rare primary malignant bone tumour.

Tiemeier GL, Brown JM, Pratap SE, McCarthy C, Kastrenopoulou A, Bradley K, Wilson S, Orosz Z, Gibbons CLMH, Oppermann U, Athanasou NA.

Clin Sarcoma Res. 2018 Feb 9;8:2. doi: 10.1186/s13569-018-0089-7. eCollection 2018.


Characterization of isoflavonoids as inhibitors of β-hydroxyacyl-acyl carrier protein dehydratase (FabZ) from Moraxella catarrhalis: Kinetics, spectroscopic, thermodynamics and in silico studies.

Kumar V, Sharma A, Pratap S, Kumar P.

Biochim Biophys Acta Gen Subj. 2018 Mar;1862(3):726-744. doi: 10.1016/j.bbagen.2017.10.017. Epub 2017 Oct 29.


Structure of Chorismate Mutase-like Domain of DAHPS from Bacillus subtilis Complexed with Novel Inhibitor Reveals Conformational Plasticity of Active Site.

Pratap S, Dev A, Kumar V, Yadav R, Narwal M, Tomar S, Kumar P.

Sci Rep. 2017 Jul 25;7(1):6364. doi: 10.1038/s41598-017-06578-1.


Role of oral and gut microbiome in nitric oxide-mediated colon motility.

Walker MY, Pratap S, Southerland JH, Farmer-Dixon CM, Lakshmyya K, Gangula PR.

Nitric Oxide. 2018 Feb 28;73:81-88. doi: 10.1016/j.niox.2017.06.003. Epub 2017 Jun 7. Review.


Diffuse Marrow Involvement in Metastatic Osteosarcoma: An Unusual Presentation.

Pratap S, Pokala HR, Meyer WH, Gehrs BC, Palacios MF.

J Oncol Pract. 2017 Jun;13(6):401-403. doi: 10.1200/JOP.2016.018507. Epub 2017 Apr 24. No abstract available.


Shared gene expression patterns in mesenchymal progenitors derived from lung and epidermis in pulmonary arterial hypertension: identifying key pathways in pulmonary vascular disease.

Gaskill C, Marriott S, Pratap S, Menon S, Hedges LK, Fessel JP, Kropski JA, Ames D, Wheeler L, Loyd JE, Hemnes AR, Roop DR, Klemm DJ, Austin ED, Majka SM.

Pulm Circ. 2016 Dec;6(4):483-497. doi: 10.1086/688314.


Acyl chain preference and inhibitor identification of Moraxella catarrhalis LpxA: Insight through crystal structure and computational studies.

Pratap S, Kesari P, Yadav R, Dev A, Narwal M, Kumar P.

Int J Biol Macromol. 2017 Mar;96:759-765. doi: 10.1016/j.ijbiomac.2017.01.005. Epub 2017 Jan 3.


Epitope Capsid-Incorporation: New Effective Approach for Vaccine Development for Chagas Disease.

Matthews QL, Farrow AL, Rachakonda G, Gu L, Nde P, Krendelchtchikov A, Pratap S, Sakhare SS, Sabbaj S, Lima MF, Villalta F.

Pathog Immun. 2016 Fall-Winter;1(2):214-233.


MMP7 interacts with ARF in nucleus to potentiate tumor microenvironments for prostate cancer progression in vivo.

Xie Y, Lu W, Liu S, Yang Q, Goodwin JS, Sathyanarayana SA, Pratap S, Chen Z.

Oncotarget. 2016 Jul 26;7(30):47609-47619. doi: 10.18632/oncotarget.10251.


New insights about pilus formation in gut-adapted Lactobacillus rhamnosus GG from the crystal structure of the SpaA backbone-pilin subunit.

Chaurasia P, Pratap S, von Ossowski I, Palva A, Krishnan V.

Sci Rep. 2016 Jun 28;6:28664. doi: 10.1038/srep28664.


Durable Response of Spinal Chordoma to Combined Inhibition of IGF-1R and EGFR.

Aleksic T, Browning L, Woodward M, Phillips R, Page S, Henderson S, Athanasou N, Ansorge O, Whitwell D, Pratap S, Hassan AB, Middleton MR, Macaulay VM.

Front Oncol. 2016 May 2;6:98. doi: 10.3389/fonc.2016.00098. eCollection 2016.


Mechanism of increased clearance of glycated albumin by proximal tubule cells.

Wagner MC, Myslinski J, Pratap S, Flores B, Rhodes G, Campos-Bilderback SB, Sandoval RM, Kumar S, Patel M, Ashish, Molitoris BA.

Am J Physiol Renal Physiol. 2016 May 1;310(10):F1089-102. doi: 10.1152/ajprenal.00605.2015. Epub 2016 Feb 17.


Early Regulation of Profibrotic Genes in Primary Human Cardiac Myocytes by Trypanosoma cruzi.

Udoko AN, Johnson CA, Dykan A, Rachakonda G, Villalta F, Mandape SN, Lima MF, Pratap S, Nde PN.

PLoS Negl Trop Dis. 2016 Jan 15;10(1):e0003747. doi: 10.1371/journal.pntd.0003747. eCollection 2016 Jan.


Active-Site Plasticity Is Essential to Carbapenem Hydrolysis by OXA-58 Class D β-Lactamase of Acinetobacter baumannii.

Pratap S, Katiki M, Gill P, Kumar P, Golemi-Kotra D.

Antimicrob Agents Chemother. 2015 Oct 12;60(1):75-86. doi: 10.1128/AAC.01393-15. Print 2016 Jan.


Finding the shortest path with PesCa: a tool for network reconstruction.

Scardoni G, Tosadori G, Pratap S, Spoto F, Laudanna C.

Version 2. F1000Res. 2015 Aug 5 [revised 2016 Jan 1];4:484. eCollection 2015.


Cocaine modulates HIV-1 integration in primary CD4+ T cells: implications in HIV-1 pathogenesis in drug-abusing patients.

Addai AB, Pandhare J, Paromov V, Mantri CK, Pratap S, Dash C.

J Leukoc Biol. 2015 Apr;97(4):779-90. doi: 10.1189/jlb.4A0714-356R. Epub 2015 Feb 17.


ECT2 regulates the Rho/ERK signalling axis to promote early recurrence in human hepatocellular carcinoma.

Chen J, Xia H, Zhang X, Karthik S, Pratap SV, Ooi LL, Hong W, Hui KM.

J Hepatol. 2015 Jun;62(6):1287-95. doi: 10.1016/j.jhep.2015.01.014. Epub 2015 Jan 21.


Fimbriae-mediated outer membrane vesicle production and invasion of Porphyromonas gingivalis.

Mantri CK, Chen CH, Dong X, Goodwin JS, Pratap S, Paromov V, Xie H.

Microbiologyopen. 2015 Feb;4(1):53-65. doi: 10.1002/mbo3.221. Epub 2014 Dec 18.


Unconventional dentistry in India - an insight into the traditional methods.

Boloor VA, Hosadurga R, Rao A, Jenifer H, Pratap S.

J Tradit Complement Med. 2014 Jul;4(3):153-8. doi: 10.4103/2225-4110.130951. Review.


Immunization with Hexon modified adenoviral vectors integrated with gp83 epitope provides protection against Trypanosoma cruzi infection.

Farrow AL, Rachakonda G, Gu L, Krendelchtchikova V, Nde PN, Pratap S, Lima MF, Villalta F, Matthews QL.

PLoS Negl Trop Dis. 2014 Aug 21;8(8):e3089. doi: 10.1371/journal.pntd.0003089. eCollection 2014 Aug.


NY-ESO-1 specific antibody and cellular responses in melanoma patients primed with NY-ESO-1 protein in ISCOMATRIX and boosted with recombinant NY-ESO-1 fowlpox virus.

Chen JL, Dawoodji A, Tarlton A, Gnjatic S, Tajar A, Karydis I, Browning J, Pratap S, Verfaille C, Venhaus RR, Pan L, Altman DG, Cebon JS, Old LL, Nathan P, Ottensmeier C, Middleton M, Cerundolo V.

Int J Cancer. 2015 Mar 15;136(6):E590-601. doi: 10.1002/ijc.29118. Epub 2014 Aug 14.


Depletion of the aryl hydrocarbon receptor in MDA-MB-231 human breast cancer cells altered the expression of genes in key regulatory pathways of cancer.

Goode G, Pratap S, Eltom SE.

PLoS One. 2014 Jun 16;9(6):e100103. doi: 10.1371/journal.pone.0100103. eCollection 2014.


Identification of a diguanylate cyclase and its role in Porphyromonas gingivalis virulence.

Chaudhuri S, Pratap S, Paromov V, Li Z, Mantri CK, Xie H.

Infect Immun. 2014 Jul;82(7):2728-35. doi: 10.1128/IAI.00084-14. Epub 2014 Apr 14.


Draft Genome Sequence of Multidrug-Resistant Acinetobacter baumannii Strain MMC4, Isolated from a Patient in Tennessee.

Mandape SN, Marshall DR, Dent LL, Pratap S.

Genome Announc. 2014 Feb 20;2(1). pii: e00051-14. doi: 10.1128/genomeA.00051-14.


Pneumovesicoscopy: an effective technique for urinary bladder foreign body.

Pandey PK, Suruchi S, Kumar BM, Kumar SP, Pratap SJ.

Urol J. 2014 Jan 4;10(4):1140-1. No abstract available.


Pre-Clinical Evaluation of rHDL Encapsulated Retinoids for the Treatment of Neuroblastoma.

Sabnis N, Pratap S, Akopova I, Bowman PW, Lacko AG.

Front Pediatr. 2013 Mar 21;1:6. doi: 10.3389/fped.2013.00006. eCollection 2013 Mar 21.


Cellular response to Trypanosoma cruzi infection induces secretion of defensin α-1, which damages the flagellum, neutralizes trypanosome motility, and inhibits infection.

Johnson CA, Rachakonda G, Kleshchenko YY, Nde PN, Madison MN, Pratap S, Cardenas TC, Taylor C, Lima MF, Villalta F.

Infect Immun. 2013 Nov;81(11):4139-48. doi: 10.1128/IAI.01459-12. Epub 2013 Aug 26.


Accurate preterm labor diagnosis using a CD55-TLR4 combination biomarker model.

Pratap S, Brown LE, Izban MG, Nowicki S, Nowicki BJ.

J Biomed Sci Eng. 2013 Mar;6:253-257.



Pratap S, Singh DP, Gupta SK, Yildirim SÖ, Butcher RJ.

Acta Crystallogr Sect E Struct Rep Online. 2013 Mar 1;69(Pt 3):o330-1. doi: 10.1107/S1600536813002894. Epub 2013 Feb 2.



Singh DP, Pratap S, Gupta SK, Butcher RJ.

Acta Crystallogr Sect E Struct Rep Online. 2012 Dec 1;68(Pt 12):o3300-1. doi: 10.1107/S1600536812044029. Epub 2012 Nov 7.


N-(1,3-Thia-zol-2-yl)-N'-[(thio-phen-2-yl)carbon-yl]thio-urea hemihydrate.

Singh DP, Pratap S, Yildirim SÖ, Butcher RJ.

Acta Crystallogr Sect E Struct Rep Online. 2012 Dec 1;68(Pt 12):o3295. doi: 10.1107/S160053681204500X. Epub 2012 Nov 7.


Fatal case of sorafenib-associated idiosyncratic hepatotoxicity in the adjuvant treatment of a patient with renal cell carcinoma.

Fairfax BP, Pratap S, Roberts IS, Collier J, Kaplan R, Meade AM, Ritchie AW, Eisen T, Macaulay VM, Protheroe A.

BMC Cancer. 2012 Dec 11;12:590. doi: 10.1186/1471-2407-12-590.

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