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Items: 1 to 50 of 136

1.

An extensively glycosylated archaeal pilus survives extreme conditions.

Wang F, Cvirkaite-Krupovic V, Kreutzberger MAB, Su Z, de Oliveira GAP, Osinski T, Sherman N, DiMaio F, Wall JS, Prangishvili D, Krupovic M, Egelman EH.

Nat Microbiol. 2019 May 20. doi: 10.1038/s41564-019-0458-x. [Epub ahead of print]

PMID:
31110358
2.

Novel haloarchaeal viruses from Lake Retba infecting Haloferax and Halorubrum species.

Mizuno CM, Prajapati B, Lucas-Staat S, Sime-Ngando T, Forterre P, Bamford DH, Prangishvili D, Krupovic M, Oksanen HM.

Environ Microbiol. 2019 Jun;21(6):2129-2147. doi: 10.1111/1462-2920.14604. Epub 2019 Apr 14.

PMID:
30920125
3.

Integrated mobile genetic elements in Thaumarchaeota.

Krupovic M, Makarova KS, Wolf YI, Medvedeva S, Prangishvili D, Forterre P, Koonin EV.

Environ Microbiol. 2019 Jun;21(6):2056-2078. doi: 10.1111/1462-2920.14564. Epub 2019 Mar 18.

PMID:
30773816
4.

ICTV Virus Taxonomy Profile: Tristromaviridae.

Prangishvili D, Rensen E, Mochizuki T, Krupovic M, Ictv Report Consortium.

J Gen Virol. 2019 Feb;100(2):135-136. doi: 10.1099/jgv.0.001190. Epub 2018 Dec 12.

PMID:
30540248
5.

New archaeal viruses discovered by metagenomic analysis of viral communities in enrichment cultures.

Liu Y, Brandt D, Ishino S, Ishino Y, Koonin EV, Kalinowski J, Krupovic M, Prangishvili D.

Environ Microbiol. 2019 Jun;21(6):2002-2014. doi: 10.1111/1462-2920.14479. Epub 2019 Jan 8.

PMID:
30451355
6.

Centennial celebration of the bacteriophage research.

Debarbieux L, Forterre P, Krupovic M, Kutateladze M, Prangishvili D.

Res Microbiol. 2018 Nov;169(9):479-480. doi: 10.1016/j.resmic.2018.10.001. Epub 2018 Nov 2. No abstract available.

PMID:
30391303
7.

Structural conservation in a membrane-enveloped filamentous virus infecting a hyperthermophilic acidophile.

Liu Y, Osinski T, Wang F, Krupovic M, Schouten S, Kasson P, Prangishvili D, Egelman EH.

Nat Commun. 2018 Aug 22;9(1):3360. doi: 10.1038/s41467-018-05684-6.

8.

ICTV Virus Taxonomy Profile: Globuloviridae.

Prangishvili D, Krupovic M, Ictv Report Consortium.

J Gen Virol. 2018 Oct;99(10):1357-1358. doi: 10.1099/jgv.0.001123. Epub 2018 Aug 9.

PMID:
30091697
9.

ICTV Virus Taxonomy Profile: Bicaudaviridae.

Prangishvili D, Krupovic M, Ictv Report Consortium.

J Gen Virol. 2018 Jul;99(7):864-865. doi: 10.1099/jgv.0.001106. Epub 2018 Jun 7.

PMID:
29877786
10.

ICTV Virus Taxonomy Profile: Guttaviridae.

Prangishvili D, Mochizuki T, Krupovic M, Ictv Report Consortium.

J Gen Virol. 2018 Mar;99(3):290-291. doi: 10.1099/jgv.0.001027. Epub 2018 Feb 8.

11.

ICTV Virus Taxonomy Profile: Ampullaviridae.

Prangishvili D, Krupovic M, Ictv Report Consortium.

J Gen Virol. 2018 Mar;99(3):288-289. doi: 10.1099/jgv.0.001023. Epub 2018 Feb 8.

12.

Rolling-circle replication initiation protein of haloarchaeal sphaerolipovirus SNJ1 is homologous to bacterial transposases of the IS91 family insertion sequences.

Wang Y, Chen B, Cao M, Sima L, Prangishvili D, Chen X, Krupovic M.

J Gen Virol. 2018 Jan 18. doi: 10.1099/jgv.0.001009. [Epub ahead of print]

PMID:
29458508
13.

Taxonomy of prokaryotic viruses: 2017 update from the ICTV Bacterial and Archaeal Viruses Subcommittee.

Adriaenssens EM, Wittmann J, Kuhn JH, Turner D, Sullivan MB, Dutilh BE, Jang HB, van Zyl LJ, Klumpp J, Lobocka M, Moreno Switt AI, Rumnieks J, Edwards RA, Uchiyama J, Alfenas-Zerbini P, Petty NK, Kropinski AM, Barylski J, Gillis A, Clokie MRC, Prangishvili D, Lavigne R, Aziz RK, Duffy S, Krupovic M, Poranen MM, Knezevic P, Enault F, Tong Y, Oksanen HM, Rodney Brister J.

Arch Virol. 2018 Apr;163(4):1125-1129. doi: 10.1007/s00705-018-3723-z. Epub 2018 Jan 22. No abstract available.

PMID:
29356990
14.

Viruses of archaea: Structural, functional, environmental and evolutionary genomics.

Krupovic M, Cvirkaite-Krupovic V, Iranzo J, Prangishvili D, Koonin EV.

Virus Res. 2018 Jan 15;244:181-193. doi: 10.1016/j.virusres.2017.11.025. Epub 2017 Nov 22. Review.

15.

Unique architecture of thermophilic archaeal virus APBV1 and its genome packaging.

Ptchelkine D, Gillum A, Mochizuki T, Lucas-Staat S, Liu Y, Krupovic M, Phillips SEV, Prangishvili D, Huiskonen JT.

Nat Commun. 2017 Nov 10;8(1):1436. doi: 10.1038/s41467-017-01668-0.

16.

The enigmatic archaeal virosphere.

Prangishvili D, Bamford DH, Forterre P, Iranzo J, Koonin EV, Krupovic M.

Nat Rev Microbiol. 2017 Nov 10;15(12):724-739. doi: 10.1038/nrmicro.2017.125. Review.

PMID:
29123227
17.

DNA-Interacting Characteristics of the Archaeal Rudiviral Protein SIRV2_Gp1.

Peeters E, Boon M, Rollie C, Willaert RG, Voet M, White MF, Prangishvili D, Lavigne R, Quax TEF.

Viruses. 2017 Jul 18;9(7). pii: E190. doi: 10.3390/v9070190.

18.

Model for a novel membrane envelope in a filamentous hyperthermophilic virus.

Kasson P, DiMaio F, Yu X, Lucas-Staat S, Krupovic M, Schouten S, Prangishvili D, Egelman EH.

Elife. 2017 Jun 22;6. pii: e26268. doi: 10.7554/eLife.26268.

19.

A Novel Type of Polyhedral Viruses Infecting Hyperthermophilic Archaea.

Liu Y, Ishino S, Ishino Y, Pehau-Arnaudet G, Krupovic M, Prangishvili D.

J Virol. 2017 Jun 9;91(13). pii: e00589-17. doi: 10.1128/JVI.00589-17. Print 2017 Jul 1.

20.

Taxonomy of prokaryotic viruses: 2016 update from the ICTV bacterial and archaeal viruses subcommittee.

Adriaenssens EM, Krupovic M, Knezevic P, Ackermann HW, Barylski J, Brister JR, Clokie MR, Duffy S, Dutilh BE, Edwards RA, Enault F, Jang HB, Klumpp J, Kropinski AM, Lavigne R, Poranen MM, Prangishvili D, Rumnieks J, Sullivan MB, Wittmann J, Oksanen HM, Gillis A, Kuhn JH.

Arch Virol. 2017 Apr;162(4):1153-1157. doi: 10.1007/s00705-016-3173-4. Epub 2016 Dec 31. No abstract available.

PMID:
28040838
21.

Abundant Lysine Methylation and N-Terminal Acetylation in Sulfolobus islandicus Revealed by Bottom-Up and Top-Down Proteomics.

Vorontsov EA, Rensen E, Prangishvili D, Krupovic M, Chamot-Rooke J.

Mol Cell Proteomics. 2016 Nov;15(11):3388-3404. Epub 2016 Aug 23.

22.

Virus-mediated archaeal hecatomb in the deep seafloor.

Danovaro R, Dell'Anno A, Corinaldesi C, Rastelli E, Cavicchioli R, Krupovic M, Noble RT, Nunoura T, Prangishvili D.

Sci Adv. 2016 Oct 12;2(10):e1600492. eCollection 2016 Oct.

23.

Bipartite Network Analysis of the Archaeal Virosphere: Evolutionary Connections between Viruses and Capsidless Mobile Elements.

Iranzo J, Koonin EV, Prangishvili D, Krupovic M.

J Virol. 2016 Nov 28;90(24):11043-11055. Print 2016 Dec 15.

24.

Eukaryotic-Like Virus Budding in Archaea.

Quemin ER, Chlanda P, Sachse M, Forterre P, Prangishvili D, Krupovic M.

MBio. 2016 Sep 13;7(5). pii: e01439-16. doi: 10.1128/mBio.01439-16.

25.

A virus of hyperthermophilic archaea with a unique architecture among DNA viruses.

Rensen EI, Mochizuki T, Quemin E, Schouten S, Krupovic M, Prangishvili D.

Proc Natl Acad Sci U S A. 2016 Mar 1;113(9):2478-83. doi: 10.1073/pnas.1518929113. Epub 2016 Feb 16.

26.

Taxonomy of prokaryotic viruses: update from the ICTV bacterial and archaeal viruses subcommittee.

Krupovic M, Dutilh BE, Adriaenssens EM, Wittmann J, Vogensen FK, Sullivan MB, Rumnieks J, Prangishvili D, Lavigne R, Kropinski AM, Klumpp J, Gillis A, Enault F, Edwards RA, Duffy S, Clokie MR, Barylski J, Ackermann HW, Kuhn JH.

Arch Virol. 2016 Apr;161(4):1095-9. doi: 10.1007/s00705-015-2728-0. Epub 2016 Jan 5. No abstract available.

PMID:
26733293
27.

Evolution of an archaeal virus nucleocapsid protein from the CRISPR-associated Cas4 nuclease.

Krupovic M, Cvirkaite-Krupovic V, Prangishvili D, Koonin EV.

Biol Direct. 2015 Oct 29;10:65. doi: 10.1186/s13062-015-0093-2.

28.

Analysis of metagenomic data reveals common features of halophilic viral communities across continents.

Roux S, Enault F, Ravet V, Colombet J, Bettarel Y, Auguet JC, Bouvier T, Lucas-Staat S, Vellet A, Prangishvili D, Forterre P, Debroas D, Sime-Ngando T.

Environ Microbiol. 2016 Mar;18(3):889-903. doi: 10.1111/1462-2920.13084. Epub 2015 Dec 10.

PMID:
26472517
29.

Special section on Molecular biology of Archaea.

Prangishvili D, Gribaldo S, Franzetti B, Forterre P.

Biochimie. 2015 Nov;118:253. doi: 10.1016/j.biochi.2015.09.020. Epub 2015 Sep 25. No abstract available.

PMID:
26403496
30.

Sulfolobus Spindle-Shaped Virus 1 Contains Glycosylated Capsid Proteins, a Cellular Chromatin Protein, and Host-Derived Lipids.

Quemin ER, Pietilä MK, Oksanen HM, Forterre P, Rijpstra WI, Schouten S, Bamford DH, Prangishvili D, Krupovic M.

J Virol. 2015 Nov;89(22):11681-91. doi: 10.1128/JVI.02270-15. Epub 2015 Sep 9.

31.

Mysterious hexagonal pyramids on the surface of Pyrobaculum cells.

Rensen E, Krupovic M, Prangishvili D.

Biochimie. 2015 Nov;118:365-7. doi: 10.1016/j.biochi.2015.06.007. Epub 2015 Jun 23.

PMID:
26115814
32.

Virology. A virus that infects a hyperthermophile encapsidates A-form DNA.

DiMaio F, Yu X, Rensen E, Krupovic M, Prangishvili D, Egelman EH.

Science. 2015 May 22;348(6237):914-7. doi: 10.1126/science.aaa4181.

33.

Ratification vote on taxonomic proposals to the International Committee on Taxonomy of Viruses (2015).

Adams MJ, Lefkowitz EJ, King AM, Bamford DH, Breitbart M, Davison AJ, Ghabrial SA, Gorbalenya AE, Knowles NJ, Krell P, Lavigne R, Prangishvili D, Sanfaçon H, Siddell SG, Simmonds P, Carstens EB.

Arch Virol. 2015 Jul;160(7):1837-50. doi: 10.1007/s00705-015-2425-z.

PMID:
25913692
34.

Archaeal viruses: living fossils of the ancient virosphere?

Prangishvili D.

Ann N Y Acad Sci. 2015 Apr;1341:35-40. doi: 10.1111/nyas.12710. Epub 2015 Feb 25.

PMID:
25716458
35.

Cellular domains and viral lineages.

Forterre P, Krupovic M, Prangishvili D.

Trends Microbiol. 2014 Oct;22(10):554-8. doi: 10.1016/j.tim.2014.07.004. Epub 2014 Aug 13.

PMID:
25129822
36.

Dark matter in archaeal genomes: a rich source of novel mobile elements, defense systems and secretory complexes.

Makarova KS, Wolf YI, Forterre P, Prangishvili D, Krupovic M, Koonin EV.

Extremophiles. 2014 Sep;18(5):877-93. doi: 10.1007/s00792-014-0672-7. Epub 2014 Aug 12.

37.

Identification of the minimal replicon and the origin of replication of the crenarchaeal plasmid pRN1.

Berkner S, Hinojosa MP, Prangishvili D, Lipps G.

Microbiologyopen. 2014 Oct;3(5):688-701. doi: 10.1002/mbo3.198. Epub 2014 Jul 25.

38.

Casposons: a new superfamily of self-synthesizing DNA transposons at the origin of prokaryotic CRISPR-Cas immunity.

Krupovic M, Makarova KS, Forterre P, Prangishvili D, Koonin EV.

BMC Biol. 2014 May 19;12:36. doi: 10.1186/1741-7007-12-36.

39.

Unique genome replication mechanism of the archaeal virus AFV1.

Pina M, Basta T, Quax TE, Joubert A, Baconnais S, Cortez D, Lambert S, Le Cam E, Bell SD, Forterre P, Prangishvili D.

Mol Microbiol. 2014 Jun;92(6):1313-25. doi: 10.1111/mmi.12630. Epub 2014 May 23.

40.

Protein-protein interactions leading to recruitment of the host DNA sliding clamp by the hyperthermophilic Sulfolobus islandicus rod-shaped virus 2.

Gardner AF, Bell SD, White MF, Prangishvili D, Krupovic M.

J Virol. 2014 Jun;88(12):7105-8. doi: 10.1128/JVI.00636-14. Epub 2014 Apr 2.

41.

Self-assembly of the general membrane-remodeling protein PVAP into sevenfold virus-associated pyramids.

Daum B, Quax TE, Sachse M, Mills DJ, Reimann J, Yildiz Ö, Häder S, Saveanu C, Forterre P, Albers SV, Kühlbrandt W, Prangishvili D.

Proc Natl Acad Sci U S A. 2014 Mar 11;111(10):3829-34. doi: 10.1073/pnas.1319245111. Epub 2014 Feb 24.

42.

Unification of the globally distributed spindle-shaped viruses of the Archaea.

Krupovic M, Quemin ER, Bamford DH, Forterre P, Prangishvili D.

J Virol. 2014 Feb;88(4):2354-8. doi: 10.1128/JVI.02941-13. Epub 2013 Dec 11.

43.

[Enigmatic archaeal viruses].

Bize A, Sezonov G, Prangishvili D.

Biol Aujourdhui. 2013;207(3):169-79. doi: 10.1051/jbio/2013015. Epub 2013 Dec 13. French.

PMID:
24330970
44.

First insights into the entry process of hyperthermophilic archaeal viruses.

Quemin ER, Lucas S, Daum B, Quax TE, Kühlbrandt W, Forterre P, Albers SV, Prangishvili D, Krupovic M.

J Virol. 2013 Dec;87(24):13379-85. doi: 10.1128/JVI.02742-13. Epub 2013 Oct 2.

45.

The legacy of Carl Woese and Wolfram Zillig: from phylogeny to landmark discoveries.

Albers SV, Forterre P, Prangishvili D, Schleper C.

Nat Rev Microbiol. 2013 Oct;11(10):713-9. doi: 10.1038/nrmicro3124. Review.

PMID:
24037452
46.

The wonderful world of archaeal viruses.

Prangishvili D.

Annu Rev Microbiol. 2013;67:565-85. doi: 10.1146/annurev-micro-092412-155633. Review.

PMID:
24024638
47.

The major role of viruses in cellular evolution: facts and hypotheses.

Forterre P, Prangishvili D.

Curr Opin Virol. 2013 Oct;3(5):558-65. doi: 10.1016/j.coviro.2013.06.013. Epub 2013 Jul 16. Review.

PMID:
23870799
48.

Massive activation of archaeal defense genes during viral infection.

Quax TE, Voet M, Sismeiro O, Dillies MA, Jagla B, Coppée JY, Sezonov G, Forterre P, van der Oost J, Lavigne R, Prangishvili D.

J Virol. 2013 Aug;87(15):8419-28. doi: 10.1128/JVI.01020-13. Epub 2013 May 22.

49.

Genomics and genetics of Sulfolobus islandicus LAL14/1, a model hyperthermophilic archaeon.

Jaubert C, Danioux C, Oberto J, Cortez D, Bize A, Krupovic M, She Q, Forterre P, Prangishvili D, Sezonov G.

Open Biol. 2013 Apr 17;3(4):130010. doi: 10.1098/rsob.130010.

50.

Genomics and biology of Rudiviruses, a model for the study of virus-host interactions in Archaea.

Prangishvili D, Koonin EV, Krupovic M.

Biochem Soc Trans. 2013 Feb 1;41(1):443-50. doi: 10.1042/BST20120313. Review.

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