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Items: 1 to 50 of 68

1.

System analysis of cross-talk between nuclear receptors reveals an opposite regulation of the cell cycle by LXR and FXR in human HepaRG liver cells.

Wigger L, Casals-Casas C, Baruchet M, Trang KB, Pradervand S, Naldi A, Desvergne B.

PLoS One. 2019 Aug 22;14(8):e0220894. doi: 10.1371/journal.pone.0220894. eCollection 2019.

2.

Molecular codes and in vitro generation of hypocretin and melanin concentrating hormone neurons.

Seifinejad A, Li S, Mikhail C, Vassalli A, Pradervand S, Arribat Y, Pezeshgi Modarres H, Allen B, John RM, Amati F, Tafti M.

Proc Natl Acad Sci U S A. 2019 Aug 20;116(34):17061-17070. doi: 10.1073/pnas.1902148116. Epub 2019 Aug 2.

3.

Intratumoral Tcf1+PD-1+CD8+ T Cells with Stem-like Properties Promote Tumor Control in Response to Vaccination and Checkpoint Blockade Immunotherapy.

Siddiqui I, Schaeuble K, Chennupati V, Fuertes Marraco SA, Calderon-Copete S, Pais Ferreira D, Carmona SJ, Scarpellino L, Gfeller D, Pradervand S, Luther SA, Speiser DE, Held W.

Immunity. 2019 Jan 15;50(1):195-211.e10. doi: 10.1016/j.immuni.2018.12.021. Epub 2019 Jan 8.

PMID:
30635237
4.

Short-lived AUF1 p42-binding mRNAs of RANKL and BCL6 have two distinct instability elements each.

Dogar AM, Pauchard-Batschulat R, Grisoni-Neupert B, Richman L, Paillusson A, Pradervand S, Hagenbüchle O, Ambrosini G, Schmid CD, Bucher P, Kühn LC.

PLoS One. 2018 Nov 12;13(11):e0206823. doi: 10.1371/journal.pone.0206823. eCollection 2018.

5.

MedCo: Enabling Secure and Privacy-Preserving Exploration of Distributed Clinical and Genomic Data.

Raisaro JL, Troncoso-Pastoriza JR, Misbach M, Sousa JS, Pradervand S, Missiaglia E, Michielin O, Ford B, Hubaux JP.

IEEE/ACM Trans Comput Biol Bioinform. 2019 Jul-Aug;16(4):1328-1341. doi: 10.1109/TCBB.2018.2854776. Epub 2018 Jul 13.

PMID:
30010584
6.

Protecting Privacy and Security of Genomic Data in i2b2 with Homomorphic Encryption and Differential Privacy.

Raisaro JL, Gwangbae Choi, Pradervand S, Colsenet R, Jacquemont N, Rosat N, Mooser V, Hubaux JP.

IEEE/ACM Trans Comput Biol Bioinform. 2018 Sep-Oct;15(5):1413-1426. doi: 10.1109/TCBB.2018.2854782. Epub 2018 Jul 10.

PMID:
30004884
7.

Kleine-Levin syndrome is associated with LMOD3 variants.

Al Shareef SM, Basit S, Li S, Pfister C, Pradervand S, Lecendreux M, Mayer G, Dauvilliers Y, Salpietro V, Houlden H, BaHammam AS, Tafti M.

J Sleep Res. 2019 Jun;28(3):e12718. doi: 10.1111/jsr.12718. Epub 2018 Jun 19.

PMID:
29923248
8.

KIAA1109 Variants Are Associated with a Severe Disorder of Brain Development and Arthrogryposis.

Gueneau L, Fish RJ, Shamseldin HE, Voisin N, Tran Mau-Them F, Preiksaitiene E, Monroe GR, Lai A, Putoux A, Allias F, Ambusaidi Q, Ambrozaityte L, Cimbalistienė L, Delafontaine J, Guex N, Hashem M, Kurdi W, Jamuar SS, Ying LJ, Bonnard C, Pippucci T, Pradervand S, Roechert B, van Hasselt PM, Wiederkehr M, Wright CF; DDD Study, Xenarios I, van Haaften G, Shaw-Smith C, Schindewolf EM, Neerman-Arbez M, Sanlaville D, Lesca G, Guibaud L, Reversade B, Chelly J, Kučinskas V, Alkuraya FS, Reymond A.

Am J Hum Genet. 2018 Jan 4;102(1):116-132. doi: 10.1016/j.ajhg.2017.12.002. Epub 2017 Dec 28.

9.

Rare missense mutations in P2RY11 in narcolepsy with cataplexy.

Degn M, Dauvilliers Y, Dreisig K, Lopez R, Pfister C, Pradervand S, Rahbek Kornum B, Tafti M.

Brain. 2017 Jun 1;140(6):1657-1668. doi: 10.1093/brain/awx093.

PMID:
28460015
10.

RNA Sequencing-Based Genome Reannotation of the Dermatophyte Arthroderma benhamiae and Characterization of Its Secretome and Whole Gene Expression Profile during Infection.

Tran VD, De Coi N, Feuermann M, Schmid-Siegert E, Băguţ ET, Mignon B, Waridel P, Peter C, Pradervand S, Pagni M, Monod M.

mSystems. 2016 Aug 2;1(4). pii: e00036-16. eCollection 2016 Jul-Aug.

11.

Renal Fanconi Syndrome and Hypophosphatemic Rickets in the Absence of Xenotropic and Polytropic Retroviral Receptor in the Nephron.

Ansermet C, Moor MB, Centeno G, Auberson M, Hu DZ, Baron R, Nikolaeva S, Haenzi B, Katanaeva N, Gautschi I, Katanaev V, Rotman S, Koesters R, Schild L, Pradervand S, Bonny O, Firsov D.

J Am Soc Nephrol. 2017 Apr;28(4):1073-1078. doi: 10.1681/ASN.2016070726. Epub 2016 Oct 31.

12.

T Cell Factor 1-Expressing Memory-like CD8(+) T Cells Sustain the Immune Response to Chronic Viral Infections.

Utzschneider DT, Charmoy M, Chennupati V, Pousse L, Ferreira DP, Calderon-Copete S, Danilo M, Alfei F, Hofmann M, Wieland D, Pradervand S, Thimme R, Zehn D, Held W.

Immunity. 2016 Aug 16;45(2):415-27. doi: 10.1016/j.immuni.2016.07.021.

13.

Identification and molecular characterisation of Lausanne Institutional Biobank participants with familial hypercholesterolaemia - a proof-of-concept study.

Maurer F, Pradervand S, Guilleret I, Nanchen D, Maghraoui A, Chapatte L, Bojkowska K, Bhuiyan ZA, Jacquemont N, Harshman K, Mooser V.

Swiss Med Wkly. 2016 Aug 6;146:w14326. doi: 10.4414/smw.2016.14326. eCollection 2016.

14.

Nephron-Specific Deletion of Circadian Clock Gene Bmal1 Alters the Plasma and Renal Metabolome and Impairs Drug Disposition.

Nikolaeva S, Ansermet C, Centeno G, Pradervand S, Bize V, Mordasini D, Henry H, Koesters R, Maillard M, Bonny O, Tokonami N, Firsov D.

J Am Soc Nephrol. 2016 Oct;27(10):2997-3004. Epub 2016 Apr 7.

15.

Bevacizumab specifically decreases elevated levels of circulating KIT+CD11b+ cells and IL-10 in metastatic breast cancer patients.

Cattin S, Fellay B, Pradervand S, Trojan A, Ruhstaller T, Rüegg C, Fürstenberger G.

Oncotarget. 2016 Mar 8;7(10):11137-50. doi: 10.18632/oncotarget.7097.

16.

The EXS Domain of PHO1 Participates in the Response of Shoots to Phosphate Deficiency via a Root-to-Shoot Signal.

Wege S, Khan GA, Jung JY, Vogiatzaki E, Pradervand S, Aller I, Meyer AJ, Poirier Y.

Plant Physiol. 2016 Jan;170(1):385-400. doi: 10.1104/pp.15.00975. Epub 2015 Nov 6.

17.

RNA Enrichment Method for Quantitative Transcriptional Analysis of Pathogens In Vivo Applied to the Fungus Candida albicans.

Amorim-Vaz S, Tran Vdu T, Pradervand S, Pagni M, Coste AT, Sanglard D.

MBio. 2015 Sep 22;6(5):e00942-15. doi: 10.1128/mBio.00942-15.

18.

Cardiac-Specific SOCS3 Deletion Prevents In Vivo Myocardial Ischemia Reperfusion Injury through Sustained Activation of Cardioprotective Signaling Molecules.

Nagata T, Yasukawa H, Kyogoku S, Oba T, Takahashi J, Nohara S, Minami T, Mawatari K, Sugi Y, Shimozono K, Pradervand S, Hoshijima M, Aoki H, Fukumoto Y, Imaizumi T.

PLoS One. 2015 May 26;10(5):e0127942. doi: 10.1371/journal.pone.0127942. eCollection 2015.

19.

Wounding of Arabidopsis halleri leaves enhances cadmium accumulation that acts as a defense against herbivory.

Plaza S, Weber J, Pajonk S, Thomas J, Talke IN, Schellenberg M, Pradervand S, Burla B, Geisler M, Martinoia E, Krämer U.

Biometals. 2015 Jun;28(3):521-8. doi: 10.1007/s10534-015-9829-9. Epub 2015 Mar 10.

20.

A neuron-specific deletion of the microRNA-processing enzyme DICER induces severe but transient obesity in mice.

Mang GM, Pradervand S, Du NH, Arpat AB, Preitner F, Wigger L, Gatfield D, Franken P.

PLoS One. 2015 Jan 28;10(1):e0116760. doi: 10.1371/journal.pone.0116760. eCollection 2015.

21.

Local renal circadian clocks control fluid-electrolyte homeostasis and BP.

Tokonami N, Mordasini D, Pradervand S, Centeno G, Jouffe C, Maillard M, Bonny O, Gachon F, Gomez RA, Sequeira-Lopez ML, Firsov D.

J Am Soc Nephrol. 2014 Jul;25(7):1430-9. doi: 10.1681/ASN.2013060641. Epub 2014 Mar 20.

22.

DQB1 locus alone explains most of the risk and protection in narcolepsy with cataplexy in Europe.

Tafti M, Hor H, Dauvilliers Y, Lammers GJ, Overeem S, Mayer G, Javidi S, Iranzo A, Santamaria J, Peraita-Adrados R, Vicario JL, Arnulf I, Plazzi G, Bayard S, Poli F, Pizza F, Geisler P, Wierzbicka A, Bassetti CL, Mathis J, Lecendreux M, Donjacour CE, van der Heide A, Heinzer R, Haba-Rubio J, Feketeova E, Högl B, Frauscher B, Benetó A, Khatami R, Cañellas F, Pfister C, Scholz S, Billiard M, Baumann CR, Ercilla G, Verduijn W, Claas FH, Dubois V, Nowak J, Eberhard HP, Pradervand S, Hor CN, Testi M, Tiercy JM, Kutalik Z.

Sleep. 2014 Jan 1;37(1):19-25. doi: 10.5665/sleep.3300.

23.

Identification of multiple mechanisms of resistance to vemurafenib in a patient with BRAFV600E-mutated cutaneous melanoma successfully rechallenged after progression.

Romano E, Pradervand S, Paillusson A, Weber J, Harshman K, Muehlethaler K, Speiser D, Peters S, Rimoldi D, Michielin O.

Clin Cancer Res. 2013 Oct 15;19(20):5749-57. doi: 10.1158/1078-0432.CCR-13-0661. Epub 2013 Aug 15.

24.

Circulating microRNAs as biomarkers for detection of autologous blood transfusion.

Leuenberger N, Schumacher YO, Pradervand S, Sander T, Saugy M, Pottgiesser T.

PLoS One. 2013 Jun 20;8(6):e66309. doi: 10.1371/journal.pone.0066309. Print 2013.

25.

FAM111A mutations result in hypoparathyroidism and impaired skeletal development.

Unger S, Górna MW, Le Béchec A, Do Vale-Pereira S, Bedeschi MF, Geiberger S, Grigelioniene G, Horemuzova E, Lalatta F, Lausch E, Magnani C, Nampoothiri S, Nishimura G, Petrella D, Rojas-Ringeling F, Utsunomiya A, Zabel B, Pradervand S, Harshman K, Campos-Xavier B, Bonafé L, Superti-Furga G, Stevenson B, Superti-Furga A.

Am J Hum Genet. 2013 Jun 6;92(6):990-5. doi: 10.1016/j.ajhg.2013.04.020. Epub 2013 May 16.

26.

Comprehensive expression analyses of neural cell-type-specific miRNAs identify new determinants of the specification and maintenance of neuronal phenotypes.

Jovičić A, Roshan R, Moisoi N, Pradervand S, Moser R, Pillai B, Luthi-Carter R.

J Neurosci. 2013 Mar 20;33(12):5127-37. doi: 10.1523/JNEUROSCI.0600-12.2013.

27.

Key electrophysiological, molecular, and metabolic signatures of sleep and wakefulness revealed in primary cortical cultures.

Hinard V, Mikhail C, Pradervand S, Curie T, Houtkooper RH, Auwerx J, Franken P, Tafti M.

J Neurosci. 2012 Sep 5;32(36):12506-17. doi: 10.1523/JNEUROSCI.2306-12.2012.

28.

Identification and functional characterization of Rca1, a transcription factor involved in both antifungal susceptibility and host response in Candida albicans.

Vandeputte P, Pradervand S, Ischer F, Coste AT, Ferrari S, Harshman K, Sanglard D.

Eukaryot Cell. 2012 Jul;11(7):916-31. doi: 10.1128/EC.00134-12. Epub 2012 May 11.

29.

Phytochrome interacting factors 4 and 5 control seedling growth in changing light conditions by directly controlling auxin signaling.

Hornitschek P, Kohnen MV, Lorrain S, Rougemont J, Ljung K, López-Vidriero I, Franco-Zorrilla JM, Solano R, Trevisan M, Pradervand S, Xenarios I, Fankhauser C.

Plant J. 2012 Sep;71(5):699-711. doi: 10.1111/j.1365-313X.2012.05033.x. Epub 2012 Jun 22.

30.

Context-dependent dual role of SKI8 homologs in mRNA synthesis and turnover.

Dorcey E, Rodriguez-Villalon A, Salinas P, Santuari L, Pradervand S, Harshman K, Hardtke CS.

PLoS Genet. 2012;8(4):e1002652. doi: 10.1371/journal.pgen.1002652. Epub 2012 Apr 12.

31.

The circadian clock modulates renal sodium handling.

Nikolaeva S, Pradervand S, Centeno G, Zavadova V, Tokonami N, Maillard M, Bonny O, Firsov D.

J Am Soc Nephrol. 2012 Jun;23(6):1019-26. doi: 10.1681/ASN.2011080842. Epub 2012 Mar 22.

32.

Circulating microRNAs as long-term biomarkers for the detection of erythropoiesis-stimulating agent abuse.

Leuenberger N, Jan N, Pradervand S, Robinson N, Saugy M.

Drug Test Anal. 2011 Nov-Dec;3(11-12):771-6. doi: 10.1002/dta.370. Epub 2011 Nov 24.

PMID:
22113880
33.

The genome of the fire ant Solenopsis invicta.

Wurm Y, Wang J, Riba-Grognuz O, Corona M, Nygaard S, Hunt BG, Ingram KK, Falquet L, Nipitwattanaphon M, Gotzek D, Dijkstra MB, Oettler J, Comtesse F, Shih CJ, Wu WJ, Yang CC, Thomas J, Beaudoing E, Pradervand S, Flegel V, Cook ED, Fabbretti R, Stockinger H, Long L, Farmerie WG, Oakey J, Boomsma JJ, Pamilo P, Yi SV, Heinze J, Goodisman MA, Farinelli L, Harshman K, Hulo N, Cerutti L, Xenarios I, Shoemaker D, Keller L.

Proc Natl Acad Sci U S A. 2011 Apr 5;108(14):5679-84. doi: 10.1073/pnas.1009690108. Epub 2011 Jan 31.

34.

Phenotypic consequences of copy number variation: insights from Smith-Magenis and Potocki-Lupski syndrome mouse models.

Ricard G, Molina J, Chrast J, Gu W, Gheldof N, Pradervand S, Schütz F, Young JI, Lupski JR, Reymond A, Walz K.

PLoS Biol. 2010 Nov 23;8(11):e1000543. doi: 10.1371/journal.pbio.1000543.

35.

Copy number variation modifies expression time courses.

Chaignat E, Yahya-Graison EA, Henrichsen CN, Chrast J, Schütz F, Pradervand S, Reymond A.

Genome Res. 2011 Jan;21(1):106-13. doi: 10.1101/gr.112748.110. Epub 2010 Nov 17.

36.

Separating the contribution of glucocorticoids and wakefulness to the molecular and electrophysiological correlates of sleep homeostasis.

Mongrain V, Hernandez SA, Pradervand S, Dorsaz S, Curie T, Hagiwara G, Gip P, Heller HC, Franken P.

Sleep. 2010 Sep;33(9):1147-57.

37.

A comprehensive analysis of gene expression profiles in distal parts of the mouse renal tubule.

Pradervand S, Zuber Mercier A, Centeno G, Bonny O, Firsov D.

Pflugers Arch. 2010 Nov;460(6):925-52. doi: 10.1007/s00424-010-0863-8. Epub 2010 Aug 5. Review.

38.

Airway surface liquid volume regulation determines different airway phenotypes in liddle compared with betaENaC-overexpressing mice.

Mall MA, Button B, Johannesson B, Zhou Z, Livraghi A, Caldwell RA, Schubert SC, Schultz C, O'Neal WK, Pradervand S, Hummler E, Rossier BC, Grubb BR, Boucher RC.

J Biol Chem. 2010 Aug 27;285(35):26945-55. doi: 10.1074/jbc.M110.151803. Epub 2010 Jun 21.

39.

Concordance among digital gene expression, microarrays, and qPCR when measuring differential expression of microRNAs.

Pradervand S, Weber J, Lemoine F, Consales F, Paillusson A, Dupasquier M, Thomas J, Richter H, Kaessmann H, Beaudoing E, Hagenbüchle O, Harshman K.

Biotechniques. 2010 Mar;48(3):219-22. doi: 10.2144/000113367.

40.

Elevated Tribbles homolog 2-specific antibody levels in narcolepsy patients.

Cvetkovic-Lopes V, Bayer L, Dorsaz S, Maret S, Pradervand S, Dauvilliers Y, Lecendreux M, Lammers GJ, Donjacour CE, Du Pasquier RA, Pfister C, Petit B, Hor H, Mühlethaler M, Tafti M.

J Clin Invest. 2010 Mar;120(3):713-9. doi: 10.1172/JCI41366. Epub 2010 Feb 15.

41.

Substantial deletion overlap among divergent Arabidopsis genomes revealed by intersection of short reads and tiling arrays.

Santuari L, Pradervand S, Amiguet-Vercher AM, Thomas J, Dorcey E, Harshman K, Xenarios I, Juenger TE, Hardtke CS.

Genome Biol. 2010 Jan 12;11(1):R4. doi: 10.1186/gb-2010-11-1-r4.

42.

Differential gene expression in the pathogenic dermatophyte Arthroderma benhamiae in vitro versus during infection.

Staib P, Zaugg C, Mignon B, Weber J, Grumbt M, Pradervand S, Harshman K, Monod M.

Microbiology. 2010 Mar;156(Pt 3):884-95. doi: 10.1099/mic.0.033464-0. Epub 2009 Nov 26.

PMID:
19942661
43.

Molecular clock is involved in predictive circadian adjustment of renal function.

Zuber AM, Centeno G, Pradervand S, Nikolaeva S, Maquelin L, Cardinaux L, Bonny O, Firsov D.

Proc Natl Acad Sci U S A. 2009 Sep 22;106(38):16523-8. doi: 10.1073/pnas.0904890106. Epub 2009 Sep 9.

44.

Sumoylated PPARalpha mediates sex-specific gene repression and protects the liver from estrogen-induced toxicity in mice.

Leuenberger N, Pradervand S, Wahli W.

J Clin Invest. 2009 Oct;119(10):3138-48. doi: 10.1172/JCI39019.

45.

Phytochrome interacting factors 4 and 5 redundantly limit seedling de-etiolation in continuous far-red light.

Lorrain S, Trevisan M, Pradervand S, Fankhauser C.

Plant J. 2009 Nov;60(3):449-61. doi: 10.1111/j.1365-313X.2009.03971.x. Epub 2009 Jul 8. Erratum in: Plant J. 2010 Feb 1;61(3):543.

46.

Segmental copy number variation shapes tissue transcriptomes.

Henrichsen CN, Vinckenbosch N, Zöllner S, Chaignat E, Pradervand S, Schütz F, Ruedi M, Kaessmann H, Reymond A.

Nat Genet. 2009 Apr;41(4):424-9. doi: 10.1038/ng.345. Epub 2009 Mar 8.

PMID:
19270705
47.

Drosophila intestinal response to bacterial infection: activation of host defense and stem cell proliferation.

Buchon N, Broderick NA, Poidevin M, Pradervand S, Lemaitre B.

Cell Host Microbe. 2009 Feb 19;5(2):200-11. doi: 10.1016/j.chom.2009.01.003.

48.

How to keep the brain awake? The complex molecular pharmacogenetics of wake promotion.

Hasan S, Pradervand S, Ahnaou A, Drinkenburg W, Tafti M, Franken P.

Neuropsychopharmacology. 2009 Jun;34(7):1625-40. doi: 10.1038/npp.2009.3. Epub 2009 Feb 4.

49.

Impact of normalization on miRNA microarray expression profiling.

Pradervand S, Weber J, Thomas J, Bueno M, Wirapati P, Lefort K, Dotto GP, Harshman K.

RNA. 2009 Mar;15(3):493-501. doi: 10.1261/rna.1295509. Epub 2009 Jan 28.

50.

Gene expression profiling in the human pathogenic dermatophyte Trichophyton rubrum during growth on proteins.

Zaugg C, Monod M, Weber J, Harshman K, Pradervand S, Thomas J, Bueno M, Giddey K, Staib P.

Eukaryot Cell. 2009 Feb;8(2):241-50. doi: 10.1128/EC.00208-08. Epub 2008 Dec 19.

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