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Investigation of Pseudomonas aeruginosa strain PcyII-10 variants resisting infection by N4-like phage Ab09 in search for genes involved in phage adsorption.

Latino L, Midoux C, Vergnaud G, Pourcel C.

PLoS One. 2019 Apr 16;14(4):e0215456. doi: 10.1371/journal.pone.0215456. eCollection 2019.


Impact of FiuA Outer Membrane Receptor Polymorphism on the Resistance of Pseudomonas aeruginosa toward Peptidoglycan Lipid II-Targeting PaeM Pyocins.

Latino L, Patin D, Chérier D, Touzé T, Pourcel C, Barreteau H, Mengin-Lecreulx D.

J Bacteriol. 2019 Jun 10;201(13). pii: e00164-19. doi: 10.1128/JB.00164-19. Print 2019 Jul 1.


Revised Interpretation of the Hain Lifescience GenoType MTBC To Differentiate Mycobacterium canettii and Members of the Mycobacterium tuberculosis Complex.

Loiseau C, Brites D, Moser I, Coll F, Pourcel C, Robbe-Austerman S, Escuyer V, Musser KA, Peacock SJ, Feuerriegel S, Kohl TA, Niemann S, Gagneux S, Köser CU.

Antimicrob Agents Chemother. 2019 May 24;63(6). pii: e00159-19. doi: 10.1128/AAC.00159-19. Print 2019 Jun.


Clinical features of Mycobacterium canettii infection: a retrospective study of 20 cases among French soldiers and relatives.

Briquet A, Vong R, Roseau JB, Javelle E, Cazes N, Rivière F, Aletti M, Otto MP, Ficko C, Duron S, Fabre M, Pourcel C, Simon F, Soler C.

Clin Infect Dis. 2019 Feb 7. doi: 10.1093/cid/ciz107. [Epub ahead of print]


First description of Mycobacterium tuberculosis and M. canettii concomitant infection: report of two cases.

Paleiron N, Soler C, Hassan MO, Andriamanantena D, Vong R, Pourcel C, Roseau JB.

Int J Tuberc Lung Dis. 2019 Feb 1;23(2):232-235. doi: 10.5588/ijtld.18.0261. Epub 2019 Jan 24.


Complete Genome Sequences of Five Acinetobacter baumannii Phages from Abidjan, Côte d'Ivoire.

Essoh C, Vernadet JP, Vergnaud G, Coulibaly A, Kakou-N'Douba A, N'Guetta AS, Resch G, Pourcel C.

Microbiol Resour Announc. 2019 Jan 3;8(1). pii: e01358-18. doi: 10.1128/MRA.01358-18. eCollection 2019 Jan.


Genotypic Expansion Within the Population Structure of Classical Brucella Species Revealed by MLVA16 Typing of 1404 Brucella Isolates From Different Animal and Geographic Origins, 1974-2006.

Vergnaud G, Hauck Y, Christiany D, Daoud B, Pourcel C, Jacques I, Cloeckaert A, Zygmunt MS.

Front Microbiol. 2018 Jul 12;9:1545. doi: 10.3389/fmicb.2018.01545. eCollection 2018.


CRISPRCasFinder, an update of CRISRFinder, includes a portable version, enhanced performance and integrates search for Cas proteins.

Couvin D, Bernheim A, Toffano-Nioche C, Touchon M, Michalik J, Néron B, Rocha EPC, Vergnaud G, Gautheret D, Pourcel C.

Nucleic Acids Res. 2018 Jul 2;46(W1):W246-W251. doi: 10.1093/nar/gky425.


Transposition Behavior Revealed by High-Resolution Description of Pseudomonas Aeruginosa Saltovirus Integration Sites.

Vergnaud G, Midoux C, Blouin Y, Bourkaltseva M, Krylov V, Pourcel C.

Viruses. 2018 May 7;10(5). pii: E245. doi: 10.3390/v10050245.


Associations between Mycobacterium tuberculosis Beijing genotype and drug resistance to four first-line drugs: a survey in China.

Liu H, Zhang Y, Liu Z, Liu J, Hauck Y, Liu J, Dong H, Liu J, Zhao X, Lu B, Jiang Y, Vergnaud G, Pourcel C, Wan K.

Front Med. 2018 Feb;12(1):92-97. doi: 10.1007/s11684-017-0610-z. Epub 2017 Dec 29.


Correction to: CRISPR-like sequences in Helicobacter pylori and application in genotyping.

Bangpanwimon K, Sottisuporn J, Mittraparp-Arthorn P, Ueaphatthanaphanich W, Rattanasupar A, Pourcel C, Vuddhakul V.

Gut Pathog. 2017 Dec 11;9:72. doi: 10.1186/s13099-017-0221-x. eCollection 2017.


CRISPR-like sequences in Helicobacter pylori and application in genotyping.

Bangpanwimon K, Sottisuporn J, Mittraparp-Arthorn P, Ueaphatthanaphanich W, Rattanasupar A, Pourcel C, Vuddhakul V.

Gut Pathog. 2017 Nov 17;9:65. doi: 10.1186/s13099-017-0215-8. eCollection 2017. Erratum in: Gut Pathog. 2017 Dec 11;9:72.


Recovery and Characterization of Bacteria Resisting Infection by Lytic Bacteriophage.

Latino L, Pourcel C.

Methods Mol Biol. 2018;1693:85-98. doi: 10.1007/978-1-4939-7395-8_8.


A carrier state is established in Pseudomonas aeruginosa by phage LeviOr01, a newly isolated ssRNA levivirus.

Pourcel C, Midoux C, Vergnaud G, Latino L.

J Gen Virol. 2017 Aug;98(8):2181-2189. doi: 10.1099/jgv.0.000883. Epub 2017 Aug 4.


Fine structure analysis of lipopolysaccharides in bacteriophage-resistant Pseudomonas aeruginosa PAO1 mutants.

Latino L, Caroff M, Pourcel C.

Microbiology. 2017 Jun;163(6):848-855. doi: 10.1099/mic.0.000476.


Correction: Comparison of French and Worldwide Bacillus anthracis Strains Favors a Recent, Post-Columbian Origin of the Predominant North-American Clade.

Vergnaud G, Girault G, Thierry S, Pourcel C, Madani N, Blouin Y.

PLoS One. 2017 Jun 27;12(6):e0180603. doi: 10.1371/journal.pone.0180603. eCollection 2017.


Clinical Relevance of Type II Fatty Acid Synthesis Bypass in Staphylococcus aureus.

Gloux K, Guillemet M, Soler C, Morvan C, Halpern D, Pourcel C, Vu Thien H, Lamberet G, Gruss A.

Antimicrob Agents Chemother. 2017 Apr 24;61(5). pii: e02515-16. doi: 10.1128/AAC.02515-16. Print 2017 May.


Large Preferred Region for Packaging of Bacterial DNA by phiC725A, a Novel Pseudomonas aeruginosa F116-Like Bacteriophage.

Pourcel C, Midoux C, Hauck Y, Vergnaud G, Latino L.

PLoS One. 2017 Jan 6;12(1):e0169684. doi: 10.1371/journal.pone.0169684. eCollection 2017.


[An history of the CRISPR-Cas systems discovery].

Pourcel C.

Biol Aujourdhui. 2017;211(4):247-254. doi: 10.1051/jbio/2018001. Epub 2018 Jun 29. French.


Complete Genome Sequences of Pseudomonas aeruginosa Phages vB_PaeP_PcyII-10_P3P1 and vB_PaeM_PcyII-10_PII10A.

Pourcel C, Midoux C, Latino L, Petit MA, Vergnaud G.

Genome Announc. 2016 Nov 17;4(6). pii: e00916-16. doi: 10.1128/genomeA.00916-16.


A new genotyping scheme based on MLVA for inter-laboratory surveillance of Streptococcus pyogenes.

Imperi M, Pittiglio V, D'Avenio G, Gherardi G, Ciammaruconi A, Lista F, Pourcel C, Baldassarri L, Creti R.

J Microbiol Methods. 2016 Aug;127:176-181. doi: 10.1016/j.mimet.2016.06.010. Epub 2016 Jun 11.


Complete Genome Sequence of PM105, a New Pseudomonas aeruginosa B3-Like Transposable Phage.

Pourcel C, Midoux C, Bourkaltseva M, Pleteneva E, Krylov V.

Genome Announc. 2016 Mar 3;4(2). pii: e01543-15. doi: 10.1128/genomeA.01543-15.


Pseudolysogeny and sequential mutations build multiresistance to virulent bacteriophages in Pseudomonas aeruginosa.

Latino L, Midoux C, Hauck Y, Vergnaud G, Pourcel C.

Microbiology. 2016 May;162(5):748-63. doi: 10.1099/mic.0.000263. Epub 2016 Feb 25.


Comparison of French and Worldwide Bacillus anthracis Strains Favors a Recent, Post-Columbian Origin of the Predominant North-American Clade.

Vergnaud G, Girault G, Thierry S, Pourcel C, Madani N, Blouin Y.

PLoS One. 2016 Feb 22;11(2):e0146216. doi: 10.1371/journal.pone.0146216. eCollection 2016. Erratum in: PLoS One. 2017 Jun 27;12 (6):e0180603.


Development of a Multiple Loci Variable Number of Tandem Repeats Analysis (MLVA) to Unravel the Intra-Pathovar Structure of Pseudomonas syringae pv. actinidiae Populations Worldwide.

Ciarroni S, Gallipoli L, Taratufolo MC, Butler MI, Poulter RT, Pourcel C, Vergnaud G, Balestra GM, Mazzaglia A.

PLoS One. 2015 Aug 11;10(8):e0135310. doi: 10.1371/journal.pone.0135310. eCollection 2015.


Investigation of a Large Collection of Pseudomonas aeruginosa Bacteriophages Collected from a Single Environmental Source in Abidjan, Côte d'Ivoire.

Essoh C, Latino L, Midoux C, Blouin Y, Loukou G, Nguetta SP, Lathro S, Cablanmian A, Kouassi AK, Vergnaud G, Pourcel C.

PLoS One. 2015 Jun 26;10(6):e0130548. doi: 10.1371/journal.pone.0130548. eCollection 2015.


A novel multiple locus variable number of tandem repeat (VNTR) analysis (MLVA) method for Propionibacterium acnes.

Hauck Y, Soler C, Gérôme P, Vong R, Macnab C, Appere G, Vergnaud G, Pourcel C.

Infect Genet Evol. 2015 Jul;33:233-41. doi: 10.1016/j.meegid.2015.05.009. Epub 2015 May 9.


Genotyping of Pseudomonas aeruginosa reveals high diversity, stability over time and good outcome of eradication.

Johansson E, Welinder-Olsson C, Gilljam M, Pourcel C, Lindblad A.

J Cyst Fibros. 2015 May;14(3):353-60. doi: 10.1016/j.jcf.2014.09.016. Epub 2014 Oct 30.


Development of a multiple-locus variable-number tandem-repeat typing scheme for genetic fingerprinting of Burkholderia cenocepacia and application to nationwide epidemiological analysis.

Segonds C, Thouverez M, Barthe A, Bossuet-Greif N, Tisseyre L, Plésiat P, Vergnaud G, Chabanon G, Pourcel C.

J Clin Microbiol. 2015 Feb;53(2):398-409. doi: 10.1128/JCM.02473-14. Epub 2014 Nov 19.


Staphylococcus aureus from 152 cases of bovine, ovine and caprine mastitis investigated by Multiple-locus variable number of tandem repeat analysis (MLVA).

Bergonier D, Sobral D, Feßler AT, Jacquet E, Gilbert FB, Schwarz S, Treilles M, Bouloc P, Pourcel C, Vergnaud G.

Vet Res. 2014 Oct 2;45:97. doi: 10.1186/s13567-014-0097-4.


Yersinia pseudotuberculosis ST42 (O:1) Strain Misidentified as Yersinia pestis by Mass Spectrometry Analysis.

Gérôme P, Le Flèche P, Blouin Y, Scholz HC, Thibault FM, Raynaud F, Vergnaud G, Pourcel C.

Genome Announc. 2014 Jun 12;2(3). pii: e00435-14. doi: 10.1128/genomeA.00435-14.


A novel Pseudomonas aeruginosa bacteriophage, Ab31, a chimera formed from temperate phage PAJU2 and P. putida lytic phage AF: characteristics and mechanism of bacterial resistance.

Latino L, Essoh C, Blouin Y, Vu Thien H, Pourcel C.

PLoS One. 2014 Apr 3;9(4):e93777. doi: 10.1371/journal.pone.0093777. eCollection 2014.


Progenitor “Mycobacterium canettii” clone responsible for lymph node tuberculosis epidemic, Djibouti.

Blouin Y, Cazajous G, Dehan C, Soler C, Vong R, Hassan MO, Hauck Y, Boulais C, Andriamanantena D, Martinaud C, Martin É, Pourcel C, Vergnaud G.

Emerg Infect Dis. 2014 Jan;20(1):21-8. doi: 10.3201/eid2001.130652.


Four genotyping schemes for phylogenetic analysis of Pseudomonas aeruginosa: comparison of their congruence with multi-locus sequence typing.

Maâtallah M, Bakhrouf A, Habeeb MA, Turlej-Rogacka A, Iversen A, Pourcel C, Sioud O, Giske CG.

PLoS One. 2013 Dec 11;8(12):e82069. doi: 10.1371/journal.pone.0082069. eCollection 2013. Erratum in: PLoS One. 2015;10(9):e0137931.


Draft Genome Sequences of Two Yersinia pseudotuberculosis ST43 (O:1b) Strains, B-7194 and B-7195.

Blouin Y, Platonov ME, Pourcel C, Evseeva VV, Afanas'ev MV, Balakhonov SV, Anisimov AP, Vergnaud G.

Genome Announc. 2013 Jul 18;1(4). pii: e00510-13. doi: 10.1128/genomeA.00510-13.


Comparative Genomics Reveal That Host-Innate Immune Responses Influence the Clinical Prevalence of Legionella pneumophila Serogroups.

Khan MA, Knox N, Prashar A, Alexander D, Abdel-Nour M, Duncan C, Tang P, Amatullah H, Dos Santos CC, Tijet N, Low DE, Pourcel C, Van Domselaar G, Terebiznik M, Ensminger AW, Guyard C.

PLoS One. 2013 Jun 27;8(6):e67298. doi: 10.1371/journal.pone.0067298. Print 2013.


The susceptibility of Pseudomonas aeruginosa strains from cystic fibrosis patients to bacteriophages.

Essoh C, Blouin Y, Loukou G, Cablanmian A, Lathro S, Kutter E, Thien HV, Vergnaud G, Pourcel C.

PLoS One. 2013 Apr 24;8(4):e60575. doi: 10.1371/journal.pone.0060575. Print 2013.


Diversity of β-lactam resistance mechanisms in cystic fibrosis isolates of Pseudomonas aeruginosa: a French multicentre study.

Llanes C, Pourcel C, Richardot C, Plésiat P, Fichant G, Cavallo JD, Mérens A; GERPA Study Group.

J Antimicrob Chemother. 2013 Aug;68(8):1763-71. doi: 10.1093/jac/dkt115. Epub 2013 Apr 29.


Draft Genome Sequences of Five Yersinia pseudotuberculosis ST19 Isolates and One Isolate Variant.

Platonov ME, Blouin Y, Evseeva VV, Afanas'ev MV, Pourcel C, Balakhonov SV, Vergnaud G, Anisimov AP.

Genome Announc. 2013 Apr 11;1(2):e0012213. doi: 10.1128/genomeA.00122-13.


Optimized Multilocus variable-number tandem-repeat analysis assay and its complementarity with pulsed-field gel electrophoresis and multilocus sequence typing for Listeria monocytogenes clone identification and surveillance.

Chenal-Francisque V, Diancourt L, Cantinelli T, Passet V, Tran-Hykes C, Bracq-Dieye H, Leclercq A, Pourcel C, Lecuit M, Brisse S.

J Clin Microbiol. 2013 Jun;51(6):1868-80. doi: 10.1128/JCM.00606-13. Epub 2013 Apr 10.


Significance of the identification in the Horn of Africa of an exceptionally deep branching Mycobacterium tuberculosis clade.

Blouin Y, Hauck Y, Soler C, Fabre M, Vong R, Dehan C, Cazajous G, Massoure PL, Kraemer P, Jenkins A, Garnotel E, Pourcel C, Vergnaud G.

PLoS One. 2012;7(12):e52841. doi: 10.1371/journal.pone.0052841. Epub 2012 Dec 27.


Rapid identification of international multidrug-resistant Pseudomonas aeruginosa clones by multiple-locus variable number of tandem repeats analysis and investigation of their susceptibility to lytic bacteriophages.

Larché J, Pouillot F, Essoh C, Libisch B, Straut M, Lee JC, Soler C, Lamarca R, Gleize E, Gabard J, Vergnaud G, Pourcel C.

Antimicrob Agents Chemother. 2012 Dec;56(12):6175-80. doi: 10.1128/AAC.01233-12. Epub 2012 Sep 17.


Diversity of Acinetobacter baumannii in four French military hospitals, as assessed by multiple locus variable number of tandem repeats analysis.

Hauck Y, Soler C, Jault P, Mérens A, Gérome P, Nab CM, Trueba F, Bargues L, Thien HV, Vergnaud G, Pourcel C.

PLoS One. 2012;7(9):e44597. doi: 10.1371/journal.pone.0044597. Epub 2012 Sep 12.


How to identify CRISPRs in sequencing data.

Drevet C, Pourcel C.

Methods Mol Biol. 2012;905:15-27. doi: 10.1007/978-1-61779-949-5_2.


High throughput multiple locus variable number of tandem repeat analysis (MLVA) of Staphylococcus aureus from human, animal and food sources.

Sobral D, Schwarz S, Bergonier D, Brisabois A, Feßler AT, Gilbert FB, Kadlec K, Lebeau B, Loisy-Hamon F, Treilles M, Pourcel C, Vergnaud G.

PLoS One. 2012;7(5):e33967. doi: 10.1371/journal.pone.0033967. Epub 2012 May 2.


A new highly discriminatory multiplex capillary-based MLVA assay as a tool for the epidemiological survey of Pseudomonas aeruginosa in cystic fibrosis patients.

Sobral D, Mariani-Kurkdjian P, Bingen E, Vu-Thien H, Hormigos K, Lebeau B, Loisy-Hamon F, Munck A, Vergnaud G, Pourcel C.

Eur J Clin Microbiol Infect Dis. 2012 Sep;31(9):2247-56. doi: 10.1007/s10096-012-1562-5. Epub 2012 Feb 11.


Investigation on Mycobacterium tuberculosis diversity in China and the origin of the Beijing clade.

Wan K, Liu J, Hauck Y, Zhang Y, Liu J, Zhao X, Liu Z, Lu B, Dong H, Jiang Y, Kremer K, Vergnaud G, van Soolingen D, Pourcel C.

PLoS One. 2011;6(12):e29190. doi: 10.1371/journal.pone.0029190. Epub 2011 Dec 29.


Evidence of diversity among epidemiologically related carbapenemase-producing Acinetobacter baumannii strains belonging to international clonal lineage II.

Minandri F, D'Arezzo S, Antunes LC, Pourcel C, Principe L, Petrosillo N, Visca P.

J Clin Microbiol. 2012 Mar;50(3):590-7. doi: 10.1128/JCM.05555-11. Epub 2012 Jan 11.


High-throughput typing method to identify a non-outbreak-involved Legionella pneumophila strain colonizing the entire water supply system in the town of Rennes, France.

Sobral D, Le Cann P, Gerard A, Jarraud S, Lebeau B, Loisy-Hamon F, Vergnaud G, Pourcel C.

Appl Environ Microbiol. 2011 Oct;77(19):6899-907. doi: 10.1128/AEM.05556-11. Epub 2011 Aug 5.


A multi locus variable number of tandem repeat analysis (MLVA) scheme for Streptococcus agalactiae genotyping.

Haguenoer E, Baty G, Pourcel C, Lartigue MF, Domelier AS, Rosenau A, Quentin R, Mereghetti L, Lanotte P.

BMC Microbiol. 2011 Jul 27;11:171. doi: 10.1186/1471-2180-11-171.

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