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Items: 27

1.

Independent evolution with the gene flux originating from multiple Xanthomonas species explains genomic heterogeneity in Xanthomonas perforans.

Newberry EA, Bhandari R, Minsavage GV, Timilsina S, Jibrin M, Kemble J, Sikora EJ, Jones JB, Potnis N.

Appl Environ Microbiol. 2019 Aug 2. pii: AEM.00885-19. doi: 10.1128/AEM.00885-19. [Epub ahead of print]

PMID:
31375496
2.

Molecular Epidemiology of Xanthomonas perforans Outbreaks in Tomato Plants from Transplant to Field as Determined by Single-Nucleotide Polymorphism Analysis.

Abrahamian P, Timilsina S, Minsavage GV, Potnis N, Jones JB, Goss EM, Vallad GE.

Appl Environ Microbiol. 2019 Aug 29;85(18). pii: e01220-19. doi: 10.1128/AEM.01220-19. Print 2019 Sep 15.

PMID:
31253682
3.

Corrigendum: Inference of Convergent Gene Acquisition Among Pseudomonas syringae Strains Isolated From Watermelon, Cantaloupe, and Squash.

Newberry EA, Ebrahim M, Timilsina S, Zlatković N, Obradović A, Bull CT, Goss EM, Huguet-Tapia JC, Paret ML, Jones JB, Potnis N.

Front Microbiol. 2019 May 3;10:963. doi: 10.3389/fmicb.2019.00963. eCollection 2019.

4.

Patterns of inter- and intrasubspecific homologous recombination inform eco-evolutionary dynamics of Xylella fastidiosa.

Potnis N, Kandel PP, Merfa MV, Retchless AC, Parker JK, Stenger DC, Almeida RPP, Bergsma-Vlami M, Westenberg M, Cobine PA, De La Fuente L.

ISME J. 2019 Sep;13(9):2319-2333. doi: 10.1038/s41396-019-0423-y. Epub 2019 May 20.

PMID:
31110262
5.

Multiple Recombination Events Drive the Current Genetic Structure of Xanthomonas perforans in Florida.

Timilsina S, Pereira-Martin JA, Minsavage GV, Iruegas-Bocardo F, Abrahamian P, Potnis N, Kolaczkowski B, Vallad GE, Goss EM, Jones JB.

Front Microbiol. 2019 Mar 13;10:448. doi: 10.3389/fmicb.2019.00448. eCollection 2019.

6.

Inference of Convergent Gene Acquisition Among Pseudomonas syringae Strains Isolated From Watermelon, Cantaloupe, and Squash.

Newberry EA, Ebrahim M, Timilsina S, Zlatković N, Obradović A, Bull CT, Goss EM, Huguet-Tapia JC, Paret ML, Jones JB, Potnis N.

Front Microbiol. 2019 Feb 19;10:270. doi: 10.3389/fmicb.2019.00270. eCollection 2019. Erratum in: Front Microbiol. 2019 May 03;10:963.

7.

Genome-Wide Association Study of Resistance to Xanthomonas gardneri in the USDA Pepper (Capsicum) Collection.

Potnis N, Branham SE, Jones JB, Wechter WP.

Phytopathology. 2019 Jul;109(7):1217-1225. doi: 10.1094/PHYTO-06-18-0211-R. Epub 2019 Jun 3.

PMID:
30773987
8.

Reclassification of Xanthomonas gardneri (ex Šutič 1957) Jones et al. 2006 as a later heterotypic synonym of Xanthomonas cynarae Trébaol et al. 2000 and description of X. cynarae pv. cynarae and X. cynarae pv. gardneri based on whole genome analyses.

Timilsina S, Kara S, Jacques MA, Potnis N, Minsavage GV, Vallad GE, Jones JB, Fischer-Le Saux M.

Int J Syst Evol Microbiol. 2019 Feb;69(2):343-349. doi: 10.1099/ijsem.0.003104. Epub 2018 Nov 20.

PMID:
30457512
9.

Genomic Inference of Recombination-Mediated Evolution in Xanthomonas euvesicatoria and X. perforans.

Jibrin MO, Potnis N, Timilsina S, Minsavage GV, Vallad GE, Roberts PD, Jones JB, Goss EM.

Appl Environ Microbiol. 2018 Jun 18;84(13). pii: e00136-18. doi: 10.1128/AEM.00136-18. Print 2018 Jul 1.

10.

Pacbio sequencing of copper-tolerant Xanthomonas citri reveals presence of a chimeric plasmid structure and provides insights into reassortment and shuffling of transcription activator-like effectors among X. citri strains.

Gochez AM, Huguet-Tapia JC, Minsavage GV, Shantaraj D, Jalan N, Strauß A, Lahaye T, Wang N, Canteros BI, Jones JB, Potnis N.

BMC Genomics. 2018 Jan 4;19(1):16. doi: 10.1186/s12864-017-4408-9.

11.

Analysis of Sequenced Genomes of Xanthomonas perforans Identifies Candidate Targets for Resistance Breeding in Tomato.

Timilsina S, Abrahamian P, Potnis N, Minsavage GV, White FF, Staskawicz BJ, Jones JB, Vallad GE, Goss EM.

Phytopathology. 2016 Oct;106(10):1097-1104. Epub 2016 Aug 11.

12.

Molecular characterization of XopAG effector AvrGf2 from Xanthomonas fuscans ssp. aurantifolii in grapefruit.

Gochez AM, Shantharaj D, Potnis N, Zhou X, Minsavage GV, White FF, Wang N, Hurlbert JC, Jones JB.

Mol Plant Pathol. 2017 Apr;18(3):405-419. doi: 10.1111/mpp.12408. Epub 2016 Jun 10.

PMID:
27030294
13.

Long read and single molecule DNA sequencing simplifies genome assembly and TAL effector gene analysis of Xanthomonas translucens.

Peng Z, Hu Y, Xie J, Potnis N, Akhunova A, Jones J, Liu Z, White FF, Liu S.

BMC Genomics. 2016 Jan 5;17:21. doi: 10.1186/s12864-015-2348-9.

14.

Plant pathogen-induced water-soaking promotes Salmonella enterica growth on tomato leaves.

Potnis N, Colee J, Jones JB, Barak JD.

Appl Environ Microbiol. 2015 Dec;81(23):8126-34. doi: 10.1128/AEM.01926-15. Epub 2015 Sep 18.

15.

Phylogenomics of Xanthomonas field strains infecting pepper and tomato reveals diversity in effector repertoires and identifies determinants of host specificity.

Schwartz AR, Potnis N, Timilsina S, Wilson M, Patané J, Martins J Jr, Minsavage GV, Dahlbeck D, Akhunova A, Almeida N, Vallad GE, Barak JD, White FF, Miller SA, Ritchie D, Goss E, Bart RS, Setubal JC, Jones JB, Staskawicz BJ.

Front Microbiol. 2015 Jun 3;6:535. doi: 10.3389/fmicb.2015.00535. eCollection 2015.

16.

Multilocus Sequence Analysis Reveals Genetic Diversity in Xanthomonads Associated With Poinsettia Production.

Rockey W, Potnis N, Timilsina S, Hong JC, Vallad GE, Jones JB, Norman DJ.

Plant Dis. 2015 Jun;99(6):874-882. doi: 10.1094/PDIS-08-14-0867-RE. Epub 2015 Jun 11.

PMID:
30699531
17.

First Report of Atypical Xanthomonas euvesicatoria Strains Causing Bacterial Spot of Tomato in Nigeria.

Jibrin MO, Timilsina S, Potnis N, Minsavage GV, Shenge KC, Akpa AD, Alegbejo MD, Beed F, Vallad GE, Jones JB.

Plant Dis. 2015 Mar;99(3):415. doi: 10.1094/PDIS-09-14-0952-PDN.

PMID:
30699707
18.

Bacterial spot of tomato and pepper: diverse Xanthomonas species with a wide variety of virulence factors posing a worldwide challenge.

Potnis N, Timilsina S, Strayer A, Shantharaj D, Barak JD, Paret ML, Vallad GE, Jones JB.

Mol Plant Pathol. 2015 Dec;16(9):907-20. doi: 10.1111/mpp.12244. Epub 2015 Apr 29.

PMID:
25649754
19.

Multilocus sequence analysis of xanthomonads causing bacterial spot of tomato and pepper plants reveals strains generated by recombination among species and recent global spread of Xanthomonas gardneri.

Timilsina S, Jibrin MO, Potnis N, Minsavage GV, Kebede M, Schwartz A, Bart R, Staskawicz B, Boyer C, Vallad GE, Pruvost O, Jones JB, Goss EM.

Appl Environ Microbiol. 2015 Feb;81(4):1520-9.

20.

First Report of Xanthomonas euvesicatoria Causing Bacterial Spot Disease in Pepper in Northwestern Nigeria.

Jibrin MO, Timilsina S, Potnis N, Minsavage GV, Shenge KC, Akpa AD, Alegbejo MD, Beed F, Vallad GE, Jones JB.

Plant Dis. 2014 Oct;98(10):1426. doi: 10.1094/PDIS-06-14-0586-PDN.

PMID:
30704013
21.

Xanthomonas perforans colonization influences Salmonella enterica in the tomato phyllosphere.

Potnis N, Soto-Arias JP, Cowles KN, van Bruggen AH, Jones JB, Barak JD.

Appl Environ Microbiol. 2014 May;80(10):3173-80. doi: 10.1128/AEM.00345-14. Epub 2014 Mar 14.

22.

Grudgingly sharing their secrets: new insight into the evolution of plant pathogenic bacteria.

Goss EM, Potnis N, Jones JB.

New Phytol. 2013 Aug;199(3):630-2. doi: 10.1111/nph.12397. No abstract available.

23.

Avirulence proteins AvrBs7 from Xanthomonas gardneri and AvrBs1.1 from Xanthomonas euvesicatoria contribute to a novel gene-for-gene interaction in pepper.

Potnis N, Minsavage G, Smith JK, Hurlbert JC, Norman D, Rodrigues R, Stall RE, Jones JB.

Mol Plant Microbe Interact. 2012 Mar;25(3):307-20. doi: 10.1094/MPMI-08-11-0205.

24.

Pathogenomics of Xanthomonas: understanding bacterium-plant interactions.

Ryan RP, Vorhölter FJ, Potnis N, Jones JB, Van Sluys MA, Bogdanove AJ, Dow JM.

Nat Rev Microbiol. 2011 May;9(5):344-55. doi: 10.1038/nrmicro2558. Epub 2011 Apr 11. Review.

PMID:
21478901
25.

Comparative genomics reveals diversity among xanthomonads infecting tomato and pepper.

Potnis N, Krasileva K, Chow V, Almeida NF, Patil PB, Ryan RP, Sharlach M, Behlau F, Dow JM, Momol M, White FF, Preston JF, Vinatzer BA, Koebnik R, Setubal JC, Norman DJ, Staskawicz BJ, Jones JB.

BMC Genomics. 2011 Mar 11;12:146. doi: 10.1186/1471-2164-12-146.

26.

Novel insights into the genomic basis of citrus canker based on the genome sequences of two strains of Xanthomonas fuscans subsp. aurantifolii.

Moreira LM, Almeida NF Jr, Potnis N, Digiampietri LA, Adi SS, Bortolossi JC, da Silva AC, da Silva AM, de Moraes FE, de Oliveira JC, de Souza RF, Facincani AP, Ferraz AL, Ferro MI, Furlan LR, Gimenez DF, Jones JB, Kitajima EW, Laia ML, Leite RP Jr, Nishiyama MY, Rodrigues Neto J, Nociti LA, Norman DJ, Ostroski EH, Pereira HA Jr, Staskawicz BJ, Tezza RI, Ferro JA, Vinatzer BA, Setubal JC.

BMC Genomics. 2010 Apr 13;11:238. doi: 10.1186/1471-2164-11-238.

27.

The type III effectors of Xanthomonas.

White FF, Potnis N, Jones JB, Koebnik R.

Mol Plant Pathol. 2009 Nov;10(6):749-66. doi: 10.1111/j.1364-3703.2009.00590.x. Review.

PMID:
19849782

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