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Items: 14

1.

Stem cell-associated heterogeneity in Glioblastoma results from intrinsic tumor plasticity shaped by the microenvironment.

Dirkse A, Golebiewska A, Buder T, Nazarov PV, Muller A, Poovathingal S, Brons NHC, Leite S, Sauvageot N, Sarkisjan D, Seyfrid M, Fritah S, Stieber D, Michelucci A, Hertel F, Herold-Mende C, Azuaje F, Skupin A, Bjerkvig R, Deutsch A, Voss-Böhme A, Niclou SP.

Nat Commun. 2019 Apr 16;10(1):1787. doi: 10.1038/s41467-019-09853-z.

2.

Neural Stem Cells of Parkinson's Disease Patients Exhibit Aberrant Mitochondrial Morphology and Functionality.

Walter J, Bolognin S, Antony PMA, Nickels SL, Poovathingal SK, Salamanca L, Magni S, Perfeito R, Hoel F, Qing X, Jarazo J, Arias-Fuenzalida J, Ignac T, Monzel AS, Gonzalez-Cano L, Pereira de Almeida L, Skupin A, Tronstad KJ, Schwamborn JC.

Stem Cell Reports. 2019 May 14;12(5):878-889. doi: 10.1016/j.stemcr.2019.03.004. Epub 2019 Apr 11.

3.

Evaluating Density Functionals by Examining Molecular Structures, Chemical Bonding, and Relative Energies of Mononuclear Ru-Cl-H-PR3 Isomers.

Poovathingal SJ, Minton TK, Szilagyi RK.

J Phys Chem A. 2019 Jan 10;123(1):343-358. doi: 10.1021/acs.jpca.8b03216. Epub 2018 Dec 27.

PMID:
30540469
4.

Single-cell transcriptomics reveals distinct inflammation-induced microglia signatures.

Sousa C, Golebiewska A, Poovathingal SK, Kaoma T, Pires-Afonso Y, Martina S, Coowar D, Azuaje F, Skupin A, Balling R, Biber K, Niclou SP, Michelucci A.

EMBO Rep. 2018 Nov;19(11). pii: e46171. doi: 10.15252/embr.201846171. Epub 2018 Sep 11.

5.

A Single-Cell Transcriptome Atlas of the Aging Drosophila Brain.

Davie K, Janssens J, Koldere D, De Waegeneer M, Pech U, Kreft Ł, Aibar S, Makhzami S, Christiaens V, Bravo González-Blas C, Poovathingal S, Hulselmans G, Spanier KI, Moerman T, Vanspauwen B, Geurs S, Voet T, Lammertyn J, Thienpont B, Liu S, Konstantinides N, Fiers M, Verstreken P, Aerts S.

Cell. 2018 Aug 9;174(4):982-998.e20. doi: 10.1016/j.cell.2018.05.057. Epub 2018 Jun 18.

6.

Session Viewpoints on the 2017 Dynamics of Molecular Collisions Conference.

Smoll EJ Jr, Poovathingal S, Murray VJ.

J Phys Chem A. 2018 Feb 1;122(4):882-889. doi: 10.1021/acs.jpca.8b00072. No abstract available.

PMID:
29385810
7.

Critical Points in Tumorigenesis: A Carcinogen-Initiated Phase Transition Analyzed via Single-Cell Proteomics.

Poovathingal SK, Kravchenko-Balasha N, Shin YS, Levine RD, Heath JR.

Small. 2016 Mar;12(11):1425-31. doi: 10.1002/smll.201501178. Epub 2016 Jan 18.

8.

Large scale computational chemistry modeling of the oxidation of highly oriented pyrolytic graphite.

Poovathingal S, Schwartzentruber TE, Srinivasan SG, van Duin AC.

J Phys Chem A. 2013 Apr 4;117(13):2692-703. doi: 10.1021/jp3125999. Epub 2013 Mar 25.

PMID:
23438070
9.

Is mitochondrial DNA turnover slower than commonly assumed?

Poovathingal SK, Gruber J, Lakshmanan L, Halliwell B, Gunawan R.

Biogerontology. 2012 Oct;13(5):557-64. doi: 10.1007/s10522-012-9390-7. Epub 2012 Aug 3.

PMID:
22864459
10.

Maximizing signal-to-noise ratio in the random mutation capture assay.

Poovathingal SK, Gruber J, Ng LF, Halliwell B, Gunawan R.

Nucleic Acids Res. 2012 Mar;40(5):e35. doi: 10.1093/nar/gkr1221. Epub 2011 Dec 17.

11.

Global parameter estimation methods for stochastic biochemical systems.

Poovathingal SK, Gunawan R.

BMC Bioinformatics. 2010 Aug 6;11:414. doi: 10.1186/1471-2105-11-414.

12.

Caenorhabditis elegans life span studies: the challenge of maintaining synchronous cohorts.

Gruber J, Poovathingal SK, Schaffer S, Ng LF, Gunawan R, Halliwell B.

Rejuvenation Res. 2010 Apr-Jun;13(2-3):347-9. doi: 10.1089/rej.2009.0943. Review.

PMID:
20426619
13.

Stochastic drift in mitochondrial DNA point mutations: a novel perspective ex silico.

Poovathingal SK, Gruber J, Halliwell B, Gunawan R.

PLoS Comput Biol. 2009 Nov;5(11):e1000572. doi: 10.1371/journal.pcbi.1000572. Epub 2009 Nov 20.

14.

Deceptively simple but simply deceptive--Caenorhabditis elegans lifespan studies: considerations for aging and antioxidant effects.

Gruber J, Ng LF, Poovathingal SK, Halliwell B.

FEBS Lett. 2009 Nov 3;583(21):3377-87. doi: 10.1016/j.febslet.2009.09.051. Epub 2009 Oct 5. Review.

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