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Items: 21

1.

Heat-induced shift in coral microbiome reveals several members of the Rhodobacteraceae family as indicator species for thermal stress in Porites lutea.

Pootakham W, Mhuantong W, Yoocha T, Putchim L, Jomchai N, Sonthirod C, Naktang C, Kongkachana W, Tangphatsornruang S.

Microbiologyopen. 2019 Sep 23:e935. doi: 10.1002/mbo3.935. [Epub ahead of print]

2.

Transcriptome analysis of oil palm inflorescences revealed candidate genes for an auxin signaling pathway involved in parthenocarpy.

Somyong S, Walayaporn K, Jomchai N, Naktang C, Yodyingyong T, Phumichai C, Pootakham W, Tangphatsornruang S.

PeerJ. 2018 Dec 17;6:e5975. doi: 10.7717/peerj.5975. eCollection 2018.

3.

Uncovering full-length transcript isoforms of sugarcane cultivar Khon Kaen 3 using single-molecule long-read sequencing.

Piriyapongsa J, Kaewprommal P, Vaiwsri S, Anuntakarun S, Wirojsirasak W, Punpee P, Klomsa-Ard P, Shaw PJ, Pootakham W, Yoocha T, Sangsrakru D, Tangphatsornruang S, Tongsima S, Tragoonrung S.

PeerJ. 2018 Oct 30;6:e5818. doi: 10.7717/peerj.5818. eCollection 2018.

4.

Genome-wide association mapping of virulence gene in rice blast fungus Magnaporthe oryzae using a genotyping by sequencing approach.

Korinsak S, Tangphatsornruang S, Pootakham W, Wanchana S, Plabpla A, Jantasuriyarat C, Patarapuwadol S, Vanavichit A, Toojinda T.

Genomics. 2019 Jul;111(4):661-668. doi: 10.1016/j.ygeno.2018.05.011. Epub 2018 May 15.

5.

Dynamics of coral-associated microbiomes during a thermal bleaching event.

Pootakham W, Mhuantong W, Putchim L, Yoocha T, Sonthirod C, Kongkachana W, Sangsrakru D, Naktang C, Jomchai N, Thongtham N, Tangphatsornruang S.

Microbiologyopen. 2018 Oct;7(5):e00604. doi: 10.1002/mbo3.604. Epub 2018 Mar 23.

6.

High resolution profiling of coral-associated bacterial communities using full-length 16S rRNA sequence data from PacBio SMRT sequencing system.

Pootakham W, Mhuantong W, Yoocha T, Putchim L, Sonthirod C, Naktang C, Thongtham N, Tangphatsornruang S.

Sci Rep. 2017 Jun 5;7(1):2774. doi: 10.1038/s41598-017-03139-4.

7.

De novo hybrid assembly of the rubber tree genome reveals evidence of paleotetraploidy in Hevea species.

Pootakham W, Sonthirod C, Naktang C, Ruang-Areerate P, Yoocha T, Sangsrakru D, Theerawattanasuk K, Rattanawong R, Lekawipat N, Tangphatsornruang S.

Sci Rep. 2017 Feb 2;7:41457. doi: 10.1038/srep41457.

9.

The two chromosomes of the mitochondrial genome of a sugarcane cultivar: assembly and recombination analysis using long PacBio reads.

Shearman JR, Sonthirod C, Naktang C, Pootakham W, Yoocha T, Sangsrakru D, Jomchai N, Tragoonrung S, Tangphatsornruang S.

Sci Rep. 2016 Aug 17;6:31533. doi: 10.1038/srep31533.

10.

Construction of a high-density integrated genetic linkage map of rubber tree (Hevea brasiliensis) using genotyping-by-sequencing (GBS).

Pootakham W, Ruang-Areerate P, Jomchai N, Sonthirod C, Sangsrakru D, Yoocha T, Theerawattanasuk K, Nirapathpongporn K, Romruensukharom P, Tragoonrung S, Tangphatsornruang S.

Front Plant Sci. 2015 May 27;6:367. doi: 10.3389/fpls.2015.00367. eCollection 2015.

11.

Genome-wide SNP discovery and identification of QTL associated with agronomic traits in oil palm using genotyping-by-sequencing (GBS).

Pootakham W, Jomchai N, Ruang-Areerate P, Shearman JR, Sonthirod C, Sangsrakru D, Tragoonrung S, Tangphatsornruang S.

Genomics. 2015 May;105(5-6):288-95. doi: 10.1016/j.ygeno.2015.02.002. Epub 2015 Feb 20.

12.

Large-scale SNP discovery through RNA sequencing and SNP genotyping by targeted enrichment sequencing in cassava (Manihot esculenta Crantz).

Pootakham W, Shearman JR, Ruang-Areerate P, Sonthirod C, Sangsrakru D, Jomchai N, Yoocha T, Triwitayakorn K, Tragoonrung S, Tangphatsornruang S.

PLoS One. 2014 Dec 31;9(12):e116028. doi: 10.1371/journal.pone.0116028. eCollection 2014.

13.

Critical function of a Chlamydomonas reinhardtii putative polyphosphate polymerase subunit during nutrient deprivation.

Aksoy M, Pootakham W, Grossman AR.

Plant Cell. 2014 Oct;26(10):4214-29. doi: 10.1105/tpc.114.129270. Epub 2014 Oct 3.

14.

Tiered regulation of sulfur deprivation responses in Chlamydomonas reinhardtii and identification of an associated regulatory factor.

Aksoy M, Pootakham W, Pollock SV, Moseley JL, González-Ballester D, Grossman AR.

Plant Physiol. 2013 May;162(1):195-211. doi: 10.1104/pp.113.214593. Epub 2013 Mar 12.

15.

Single nucleotide polymorphism marker development in the rubber tree, Hevea brasiliensis (Euphorbiaceae).

Pootakham W, Chanprasert J, Jomchai N, Sangsrakru D, Yoocha T, Therawattanasuk K, Tangphatsornruang S.

Am J Bot. 2011 Nov;98(11):e337-8. doi: 10.3732/ajb.1100228. Epub 2011 Oct 24.

16.

Reverse genetics in Chlamydomonas: a platform for isolating insertional mutants.

Gonzalez-Ballester D, Pootakham W, Mus F, Yang W, Catalanotti C, Magneschi L, de Montaigu A, Higuera JJ, Prior M, Galván A, Fernandez E, Grossman AR.

Plant Methods. 2011 Jul 27;7:24. doi: 10.1186/1746-4811-7-24.

17.

Identification and regulation of plasma membrane sulfate transporters in Chlamydomonas.

Pootakham W, Gonzalez-Ballester D, Grossman AR.

Plant Physiol. 2010 Aug;153(4):1653-68. doi: 10.1104/pp.110.157875. Epub 2010 May 24.

18.

Genetic interactions between regulators of Chlamydomonas phosphorus and sulfur deprivation responses.

Moseley JL, Gonzalez-Ballester D, Pootakham W, Bailey S, Grossman AR.

Genetics. 2009 Mar;181(3):889-905. doi: 10.1534/genetics.108.099382. Epub 2008 Dec 15.

19.

The central role of a SNRK2 kinase in sulfur deprivation responses.

Gonzalez-Ballester D, Pollock SV, Pootakham W, Grossman AR.

Plant Physiol. 2008 May;147(1):216-27. doi: 10.1104/pp.108.116137. Epub 2008 Mar 7.

20.

The Chlamydomonas genome reveals the evolution of key animal and plant functions.

Merchant SS, Prochnik SE, Vallon O, Harris EH, Karpowicz SJ, Witman GB, Terry A, Salamov A, Fritz-Laylin LK, Maréchal-Drouard L, Marshall WF, Qu LH, Nelson DR, Sanderfoot AA, Spalding MH, Kapitonov VV, Ren Q, Ferris P, Lindquist E, Shapiro H, Lucas SM, Grimwood J, Schmutz J, Cardol P, Cerutti H, Chanfreau G, Chen CL, Cognat V, Croft MT, Dent R, Dutcher S, Fernández E, Fukuzawa H, González-Ballester D, González-Halphen D, Hallmann A, Hanikenne M, Hippler M, Inwood W, Jabbari K, Kalanon M, Kuras R, Lefebvre PA, Lemaire SD, Lobanov AV, Lohr M, Manuell A, Meier I, Mets L, Mittag M, Mittelmeier T, Moroney JV, Moseley J, Napoli C, Nedelcu AM, Niyogi K, Novoselov SV, Paulsen IT, Pazour G, Purton S, Ral JP, Riaño-Pachón DM, Riekhof W, Rymarquis L, Schroda M, Stern D, Umen J, Willows R, Wilson N, Zimmer SL, Allmer J, Balk J, Bisova K, Chen CJ, Elias M, Gendler K, Hauser C, Lamb MR, Ledford H, Long JC, Minagawa J, Page MD, Pan J, Pootakham W, Roje S, Rose A, Stahlberg E, Terauchi AM, Yang P, Ball S, Bowler C, Dieckmann CL, Gladyshev VN, Green P, Jorgensen R, Mayfield S, Mueller-Roeber B, Rajamani S, Sayre RT, Brokstein P, Dubchak I, Goodstein D, Hornick L, Huang YW, Jhaveri J, Luo Y, Martínez D, Ngau WC, Otillar B, Poliakov A, Porter A, Szajkowski L, Werner G, Zhou K, Grigoriev IV, Rokhsar DS, Grossman AR.

Science. 2007 Oct 12;318(5848):245-50.

21.

Insights into the acclimation of Chlamydomonas reinhardtii to sulfur deprivation.

Pollock SV, Pootakham W, Shibagaki N, Moseley JL, Grossman AR.

Photosynth Res. 2005 Dec;86(3):475-89. Epub 2005 Nov 15. Review.

PMID:
16307308

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