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Integrating population genetics to define conservation units from the core to the edge of Rhinolophus ferrumequinum western range.

Tournayre O, Pons JB, Leuchtmann M, Leblois R, Piry S, Filippi-Codaccioni O, Loiseau A, Duhayer J, Garin I, Mathews F, Puechmaille S, Charbonnel N, Pontier D.

Ecol Evol. 2019 Oct 12;9(21):12272-12290. doi: 10.1002/ece3.5714. eCollection 2019 Nov.


The m6A pathway protects the transcriptome integrity by restricting RNA chimera formation in plants.

Pontier D, Picart C, El Baidouri M, Roudier F, Xu T, Lahmy S, Llauro C, Azevedo J, Laudié M, Attina A, Hirtz C, Carpentier MC, Shen L, Lagrange T.

Life Sci Alliance. 2019 May 29;2(3). pii: e201900393. doi: 10.26508/lsa.201900393. Print 2019 Jun.


UAP56 associates with DRM2 and is localized to chromatin in Arabidopsis.

Azevedo J, Picart C, Dureau L, Pontier D, Jaquinod-Kieffer S, Hakimi MA, Lagrange T.

FEBS Open Bio. 2019 May;9(5):973-985. doi: 10.1002/2211-5463.12627. Epub 2019 Apr 5.


Coping with change in predation risk across space and time through complementary behavioral responses.

Blanchard P, Lauzeral C, Chamaillé-Jammes S, Brunet C, Lec'hvien A, Péron G, Pontier D.

BMC Ecol. 2018 Dec 20;18(1):60. doi: 10.1186/s12898-018-0215-7.


Evolution of Hepatitis B Virus Receptor NTCP Reveals Differential Pathogenicities and Species Specificities of Hepadnaviruses in Primates, Rodents, and Bats.

Jacquet S, Pons JB, De Bernardo A, Ngoubangoye B, Cosset FL, Régis C, Etienne L, Pontier D.

J Virol. 2019 Feb 19;93(5). pii: e01738-18. doi: 10.1128/JVI.01738-18. Print 2019 Mar 1.


Coexistence of two sympatric cryptic bat species in French Guiana: insights from genetic, acoustic and ecological data.

Filippi-Codaccioni O, Beugin MP, de Vienne DM, Portanier E, Fouchet D, Kaerle C, Muselet L, Queney G, Petit EJ, Regis C, Pons JB, Pontier D.

BMC Evol Biol. 2018 Nov 20;18(1):175. doi: 10.1186/s12862-018-1289-8.


A fast likelihood solution to the genetic clustering problem.

Beugin MP, Gayet T, Pontier D, Devillard S, Jombart T.

Methods Ecol Evol. 2018 Apr;9(4):1006-1016. doi: 10.1111/2041-210X.12968. Epub 2018 Jan 30.


Corrigendum: Argonaute quenching and global changes in Dicer homeostasis caused by a pathogen-encoded GW repeat protein.

Azevedo J, Garcia D, Pontier D, Ohnesorge S, Yu A, Garcia S, Braun L, Bergdoll M, Hakimi MA, Lagrange T, Voinnet O.

Genes Dev. 2018 Apr 1;32(7-8):593-595. doi: 10.1101/gad.314419.118. No abstract available.


Linking influenza epidemic onsets to covariates at different scales using a dynamical model.

Roussel M, Pontier D, Cohen JM, Lina B, Fouchet D.

PeerJ. 2018 Mar 8;6:e4440. doi: 10.7717/peerj.4440. eCollection 2018.


The One Health Concept: 10 Years Old and a Long Road Ahead.

Destoumieux-Garzón D, Mavingui P, Boetsch G, Boissier J, Darriet F, Duboz P, Fritsch C, Giraudoux P, Le Roux F, Morand S, Paillard C, Pontier D, Sueur C, Voituron Y.

Front Vet Sci. 2018 Feb 12;5:14. doi: 10.3389/fvets.2018.00014. eCollection 2018. Review.


Metabarcoding for the parallel identification of several hundred predators and their prey: Application to bat species diet analysis.

Galan M, Pons JB, Tournayre O, Pierre É, Leuchtmann M, Pontier D, Charbonnel N.

Mol Ecol Resour. 2018 May;18(3):474-489. doi: 10.1111/1755-0998.12749. Epub 2018 Jan 24.


Ecological networks to unravel the routes to horizontal transposon transfers.

Venner S, Miele V, Terzian C, Biémont C, Daubin V, Feschotte C, Pontier D.

PLoS Biol. 2017 Feb 15;15(2):e2001536. doi: 10.1371/journal.pbio.2001536. eCollection 2017 Feb.


Evidence for ARGONAUTE4-DNA interactions in RNA-directed DNA methylation in plants.

Lahmy S, Pontier D, Bies-Etheve N, Laudié M, Feng S, Jobet E, Hale CJ, Cooke R, Hakimi MA, Angelov D, Jacobsen SE, Lagrange T.

Genes Dev. 2016 Dec 1;30(23):2565-2570. doi: 10.1101/gad.289553.116. Epub 2016 Dec 16.


The host specificity of ape malaria parasites can be broken in confined environments.

Ngoubangoye B, Boundenga L, Arnathau C, Mombo IM, Durand P, Tsoumbou TA, Otoro BV, Sana R, Okouga AP, Moukodoum N, Willaume E, Herbert A, Fouchet D, Rougeron V, Bâ CT, Ollomo B, Paupy C, Leroy EM, Renaud F, Pontier D, Prugnolle F.

Int J Parasitol. 2016 Oct;46(11):737-44. doi: 10.1016/j.ijpara.2016.06.004. Epub 2016 Jul 30.


Quantifying the role of weather on seasonal influenza.

Roussel M, Pontier D, Cohen JM, Lina B, Fouchet D.

BMC Public Health. 2016 May 26;16:441. doi: 10.1186/s12889-016-3114-x.


Analyzing the proximity to cover in a landscape of fear: a new approach applied to fine-scale habitat use by rabbits facing feral cat predation on Kerguelen archipelago.

Blanchard P, Lauzeral C, Chamaillé-Jammes S, Yoccoz NG, Pontier D.

PeerJ. 2016 Mar 7;4:e1769. doi: 10.7717/peerj.1769. eCollection 2016.


Bioecological Drivers of Rabies Virus Circulation in a Neotropical Bat Community.

de Thoisy B, Bourhy H, Delaval M, Pontier D, Dacheux L, Darcissac E, Donato D, Guidez A, Larrous F, Lavenir R, Salmier A, Lacoste V, Lavergne A.

PLoS Negl Trop Dis. 2016 Jan 25;10(1):e0004378. doi: 10.1371/journal.pntd.0004378. eCollection 2016 Jan.


Complete Genome and Phylogeny of Puumala Hantavirus Isolates Circulating in France.

Castel G, Couteaudier M, Sauvage F, Pons JB, Murri S, Plyusnina A, Pontier D, Cosson JF, Plyusnin A, Marianneau P, Tordo N.

Viruses. 2015 Oct 22;7(10):5476-88. doi: 10.3390/v7102884.


Parasite-Parasite Interactions in the Wild: How To Detect Them?

Hellard E, Fouchet D, Vavre F, Pontier D.

Trends Parasitol. 2015 Dec;31(12):640-652. doi: 10.1016/ Epub 2015 Oct 1. Review.


Modes of transmission of Simian T-lymphotropic Virus Type 1 in semi-captive mandrills (Mandrillus sphinx).

Roussel M, Pontier D, Ngoubangoye B, Kazanji M, Verrier D, Fouchet D.

Vet Microbiol. 2015 Sep 30;179(3-4):155-61. doi: 10.1016/j.vetmic.2015.06.010. Epub 2015 Jun 23.


Unknown age in health disorders: A method to account for its cumulative effect and an application to feline viruses interactions.

Hellard E, Pontier D, Siberchicot A, Sauvage F, Fouchet D.

Epidemics. 2015 Jun;11:48-55. doi: 10.1016/j.epidem.2015.02.004. Epub 2015 Feb 24.


Quantifying transmission by stage of infection in the field: the example of SIV-1 and STLV-1 infecting mandrills.

Roussel M, Pontier D, Kazanji M, Ngoubangoye B, Mahieux R, Verrier D, Fouchet D.

Am J Primatol. 2015 Mar;77(3):309-18. doi: 10.1002/ajp.22346. Epub 2014 Oct 8.


Behavioural and physiological indicators of shelter dogs' welfare: reflections on the no-kill policy on free-ranging dogs in Italy revisited on the basis of 15 years of implementation.

Cafazzo S, Maragliano L, Bonanni R, Scholl F, Guarducci M, Scarcella R, Di Paolo M, Pontier D, Lai O, Carlevaro F, Bucci E, Cerini N, Carlevaro L, Alfieri L, Fantini C, Natoli E.

Physiol Behav. 2014 Jun 22;133:223-9. doi: 10.1016/j.physbeh.2014.05.046. Epub 2014 Jun 4.


Early infections by myxoma virus of young rabbits (Oryctolagus cuniculus) protected by maternal antibodies activate their immune system and enhance herd immunity in wild populations.

Marchandeau S, Pontier D, Guitton JS, Letty J, Fouchet D, Aubineau J, Berger F, Léonard Y, Roobrouck A, Gelfi J, Peralta B, Bertagnoli S.

Vet Res. 2014 Mar 4;45:26. doi: 10.1186/1297-9716-45-26.


Exploration forays in juvenile European hares (Lepus europaeus): dispersal preludes or hunting-induced troubles?

Avril A, Letty J, Léonard Y, Pontier D.

BMC Ecol. 2014 Feb 26;14:6. doi: 10.1186/1472-6785-14-6.


Accounting for sampling error when inferring population synchrony from time-series data: a Bayesian state-space modelling approach with applications.

Santin-Janin H, Hugueny B, Aubry P, Fouchet D, Gimenez O, Pontier D.

PLoS One. 2014 Jan 29;9(1):e87084. doi: 10.1371/journal.pone.0087084. eCollection 2014.


Differential association between circulating testosterone and infection risk by several viruses in natural cat populations: a behavioural-mediated effect?

Hellard E, Fouchet D, Rey B, Mouchet A, Poulet H, Pontier D.

Parasitology. 2013 Apr;140(4):521-9. doi: 10.1017/S0031182012001862. Epub 2013 Jan 3.


Ago hook and RNA helicase motifs underpin dual roles for SDE3 in antiviral defense and silencing of nonconserved intergenic regions.

Garcia D, Garcia S, Pontier D, Marchais A, Renou JP, Lagrange T, Voinnet O.

Mol Cell. 2012 Oct 12;48(1):109-20. doi: 10.1016/j.molcel.2012.07.028. Epub 2012 Aug 30.


NERD, a plant-specific GW protein, defines an additional RNAi-dependent chromatin-based pathway in Arabidopsis.

Pontier D, Picart C, Roudier F, Garcia D, Lahmy S, Azevedo J, Alart E, Laudié M, Karlowski WM, Cooke R, Colot V, Voinnet O, Lagrange T.

Mol Cell. 2012 Oct 12;48(1):121-32. doi: 10.1016/j.molcel.2012.07.027. Epub 2012 Aug 30.


A multi-event model to study stage-dependent dispersal in radio-collared hares: when hunting promotes costly transience.

Avril A, Letty J, Pradel R, Léonard Y, Santin-Janin H, Pontier D.

Ecology. 2012 Jun;93(6):1305-16.


Natural simian immunodeficiency virus transmission in mandrills: a family affair?

Fouchet D, Verrier D, Ngoubangoye B, Souquière S, Makuwa M, Kazanji M, Gonzalez JP, Pontier D.

Proc Biol Sci. 2012 Sep 7;279(1742):3426-35. doi: 10.1098/rspb.2012.0963. Epub 2012 Jun 6.


Emergence and prevalence of human vector-borne diseases in sink vector populations.

Rascalou G, Pontier D, Menu F, Gourbière S.

PLoS One. 2012;7(5):e36858. doi: 10.1371/journal.pone.0036858. Epub 2012 May 18.


Human prion protein binds Argonaute and promotes accumulation of microRNA effector complexes.

Gibbings D, Leblanc P, Jay F, Pontier D, Michel F, Schwab Y, Alais S, Lagrange T, Voinnet O.

Nat Struct Mol Biol. 2012 Apr 8;19(5):517-24, S1. doi: 10.1038/nsmb.2273.


True versus false parasite interactions: a robust method to take risk factors into account and its application to feline viruses.

Hellard E, Pontier D, Sauvage F, Poulet H, Fouchet D.

PLoS One. 2012;7(1):e29618. doi: 10.1371/journal.pone.0029618. Epub 2012 Jan 3.


Linking genetic diversity and temporal fluctuations in population abundance of the introduced feral cat (Felis silvestris catus) on the Kerguelen archipelago.

Devillard S, Santin-Janin H, Say L, Pontier D.

Mol Ecol. 2011 Dec;20(24):5141-53. doi: 10.1111/j.1365-294X.2011.05329.x. Epub 2011 Nov 21.


When cats' ways of life interact with their viruses: a study in 15 natural populations of owned and unowned cats (Felis silvestris catus).

Hellard E, Fouchet D, Santin-Janin H, Tarin B, Badol V, Coupier C, Leblanc G, Poulet H, Pontier D.

Prev Vet Med. 2011 Sep 1;101(3-4):250-64. doi: 10.1016/j.prevetmed.2011.04.020. Epub 2011 Jun 25.


Xist regulation and function explored.

Pontier DB, Gribnau J.

Hum Genet. 2011 Aug;130(2):223-36. doi: 10.1007/s00439-011-1008-7. Epub 2011 May 28. Review.


A plant-specific transcription factor IIB-related protein, pBRP2, is involved in endosperm growth control.

Cavel E, Pillot M, Pontier D, Lahmy S, Bies-Etheve N, Vega D, Grimanelli D, Lagrange T.

PLoS One. 2011 Feb 24;6(2):e17216. doi: 10.1371/journal.pone.0017216.


Estimating drop-out probabilities in forensic DNA samples: a simulation approach to evaluate different models.

Haned H, Egeland T, Pontier D, Pène L, Gill P.

Forensic Sci Int Genet. 2011 Nov;5(5):525-31. doi: 10.1016/j.fsigen.2010.12.002. Epub 2011 Jan 8.


Estimating the number of contributors to forensic DNA mixtures: does maximum likelihood perform better than maximum allele count?

Haned H, Pène L, Lobry JR, Dufour AB, Pontier D.

J Forensic Sci. 2011 Jan;56(1):23-8. doi: 10.1111/j.1556-4029.2010.01550.x. Epub 2010 Sep 14.


Pathocenosis: a holistic approach to disease ecology.

Gonzalez JP, Guiserix M, Sauvage F, Guitton JS, Vidal P, Bahi-Jaber N, Louzir H, Pontier D.

Ecohealth. 2010 Jun;7(2):237-41. doi: 10.1007/s10393-010-0326-x. Epub 2010 Jul 1.


The predictive value of the maximum likelihood estimator of the number of contributors to a DNA mixture.

Haned H, Pène L, Sauvage F, Pontier D.

Forensic Sci Int Genet. 2011 Aug;5(4):281-4. doi: 10.1016/j.fsigen.2010.04.005. Epub 2010 May 20.


Argonaute quenching and global changes in Dicer homeostasis caused by a pathogen-encoded GW repeat protein.

Azevedo J, Garcia D, Pontier D, Ohnesorge S, Yu A, Garcia S, Braun L, Bergdoll M, Hakimi MA, Lagrange T, Voinnet O.

Genes Dev. 2010 May;24(9):904-15. doi: 10.1101/gad.1908710. Erratum in: Genes Dev. 2018 Apr 1;32(7-8):593-595.


An RNA polymerase II- and AGO4-associated protein acts in RNA-directed DNA methylation.

Gao Z, Liu HL, Daxinger L, Pontes O, He X, Qian W, Lin H, Xie M, Lorkovic ZJ, Zhang S, Miki D, Zhan X, Pontier D, Lagrange T, Jin H, Matzke AJ, Matzke M, Pikaard CS, Zhu JK.

Nature. 2010 May 6;465(7294):106-9. doi: 10.1038/nature09025. Epub 2010 Apr 21.


Modelling the effect of temperature on transmission of dengue.

Barbazan P, Guiserix M, Boonyuan W, Tuntaprasart W, Pontier D, Gonzalez JP.

Med Vet Entomol. 2010 Mar;24(1):66-73. doi: 10.1111/j.1365-2915.2009.00848.x.


Putting phylogeny into the analysis of biological traits: a methodological approach.

Jombart T, Pavoine S, Devillard S, Pontier D.

J Theor Biol. 2010 Jun 7;264(3):693-701. doi: 10.1016/j.jtbi.2010.03.038. Epub 2010 Mar 31.


Genome-wide computational identification of WG/GW Argonaute-binding proteins in Arabidopsis.

Karlowski WM, Zielezinski A, Carrère J, Pontier D, Lagrange T, Cooke R.

Nucleic Acids Res. 2010 Jul;38(13):4231-45. doi: 10.1093/nar/gkq162. Epub 2010 Mar 24.


Plant lipid-associated fibrillin proteins condition jasmonate production under photosynthetic stress.

Youssef A, Laizet Y, Block MA, Maréchal E, Alcaraz JP, Larson TR, Pontier D, Gaffé J, Kuntz M.

Plant J. 2010 Feb 1;61(3):436-45. doi: 10.1111/j.1365-313X.2009.04067.x. Epub 2009 Nov 3.


Using dynamic stochastic modelling to estimate population risk factors in infectious disease: the example of FIV in 15 cat populations.

Fouchet D, Leblanc G, Sauvage F, Guiserix M, Poulet H, Pontier D.

PLoS One. 2009 Oct 16;4(10):e7377. doi: 10.1371/journal.pone.0007377.


Can cat predation help competitors coexist in seabird communities?

Pontier D, Fouchet D, Bried J.

J Theor Biol. 2010 Jan 7;262(1):90-6. doi: 10.1016/j.jtbi.2009.09.006. Epub 2009 Sep 15.


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